Poecilia formosa (Amazon molly): 103154562
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Entry
103154562 CDS
T07984
Symbol
skiv2l
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103154562 (skiv2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103154562 (skiv2l)
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103154562 (skiv2l)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103154562 (skiv2l)
mRNA degradation factors
3'-5' decay
Ski complex
103154562 (skiv2l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
Helicase_C
DEXQc_Suv3
ResIII
MTR4-like_stalk
DUF3516
Motif
Other DBs
NCBI-GeneID:
103154562
NCBI-ProteinID:
XP_007575955
Ensembl:
ENSPFOG00000002424
UniProt:
A0A087XAR7
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MDRIHVPPVGPMDLPLSLLEMGRSGRFELITHPLPDQPLPPQSTLPHGLPPTSLGLEREV
EKRFLLDPAWLPIHDTDFAFQKFLKVTERKVNVDSLLSCAPSPLHSGLSVVRDPTTGMLL
DFTEVLLENTGLSAKNSLSLQRQPGPPSESLRGSNTNYPFLPGGMEELTLDQIKTRSEQE
EEIDFEKDLLKIPPGLKAGMDFSDKDAKIAKPEVNLMSLLSTLENIPDLLPEAEEKEDGK
TGEEAVKLPRTNSLEDLGIKDAESSCSQTEAGKTDKSKPKENPEEKKKWAVPVDILSPCE
DFYKRIPNPAFKWPFELDTFQKQAVLRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMT
RTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLSPESSCLIMTTEILRSMLYNGSEVI
RDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKRH
IYVISTMKRPVPLEHYLYTGNSTKTQKEMFLLVDAAGNFLTKGYYTAVDTKKERTSKHAQ
SFGTKSTPQHTSASQDRAVWLTLLHFLSQRQQTPVVAFTFSRTRCDENARSLDSMDLTTS
IEKAEIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVIEMLFSRG
LVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGT
VIILCKSGVHDMADLHAMMMGKPTILQSQFRLTYTMILNLLRVEALRVTDMMRRSFSESH
RDTQAHEKRIGHLKQMLASLPPLETEGQLSDILPYYHTATEMQNTREALQKAIMESVNGL
KALSVGRVVIVNNKQHLNALGVILQVSSDSVNRTFTALIICEKGNEEVAGKAEDSTSFQH
LYNTALFIPEGPCSHTVQKLKLQDISAITVKTLKVIPDRIIDNYNKRQQPRFRADPPGQA
ISTATQELLRLAEANPGGVATLDPVNDLQLKSVDVVESSMRLRVLQDSLLDFNCVHSPTF
AEQFARIKERMSVQEELDRLLFLVSDQSLMLLPEYHQRIKVLQSLQYIDSSGAVQLKGRV
ACQISSHELLLTELLFENVLSPLAPEESAALLSCLVFTQNTQTEPHITSTLKESIDRVLS
VAQRIGQLQRECGIAQTAEEFVGQFKFGLTEVVYCWARGMPFAEIALLTDVQEGTVVRCI
QRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatacatgtgccccctgtcggccccatggacctgccgctgtccctgctggag
atggggcgctcaggaaggtttgagctcatcacacacccgctgcctgaccagcctttacct
ccccagagcacgcttccccatggactcccacccaccagcctgggcctggagagagaagtg
gagaaacggtttctattggacccggcctggctgcccatccatgacacagactttgccttc
cagaagtttctcaaggtgactgaaaggaaggttaacgtcgactctttgctcagctgcgcc
ccgtctccgcttcactctgggctctcggtcgtcagagatccaaccacagggatgctgctg
gacttcacagaggttttgcttgaaaacactggcctgtcggccaaaaactcgctgtcactg
cagcgtcaacctgggcctccttctgaaagccttcggggaagcaacactaactaccccttc
cttcctggaggaatggaggaactcactctggaccaaattaagacgagatctgagcaggag
gaggaaatagactttgagaaagatttactgaaaatccctcctggactcaaagctggcatg
gatttctctgacaaagatgccaaaatagcaaaaccagaggtgaacctcatgtctctgctg
tccacactggagaacattcctgatcttctgcctgaagcagaggagaaggaagatggcaaa
acaggagaagaggccgtcaaacttcccaggactaacagcctggaagacctgggaataaag
gatgcagagtcttcctgttcccaaacagaggccggaaaaacagacaagtcaaagccaaaa
gagaacccagaggagaaaaagaaatgggccgtccctgtggacattttgtcaccctgcgag
gatttctacaaacgcatcccaaacccggcgttcaagtggccctttgagttggacactttc
cagaagcaggctgtgctgaggctggaggcccacgactccgtgtttgtagccgctcacacg
tcagccggcaaaacggtggtggctgagtacgccatcgctctgtcccagaaacacatgaca
aggaccatctacacgtctcccatcaaagctctgtccaatcagaaattcagagactttaaa
aacacttttggggacgttggactcctgaccggagacgtccagctcagtccagagtcttcc
tgtctcatcatgaccacagagatcctcaggtcgatgctgtacaacggctcagaggtcatc
agagacctggagtgggtgatcttcgacgaggtccactatattaatgatgctgagagaggg
gtcgtttgggaggaagtgctgatcatgcttcctgatcacgtcagcatcatcctgctcagc
gccacggtgcccaatgctttggagttcagcgagtggatcggtcgtattaagaagaggcac
atttacgtgatcagcaccatgaagcggcccgtaccactggagcattacctgtacactgga
aacagcaccaagacccagaaggagatgttcctgctggtggacgctgcaggaaacttcctc
accaaaggctactacaccgctgtcgatacaaagaaggagcggaccagcaaacacgcccag
tcattcggcacaaagagcacgcctcagcacacctcagccagccaggaccgagcggtgtgg
ctcacgctgctacacttcctgtcccagcggcagcagacccccgtggtggccttcaccttc
tctcggacgcggtgcgacgagaacgcccgctcactggactccatggacctcaccacctcc
atcgagaaggcggagatccactccttcttccagaagagcctcagtcggctgcgaggagga
gaccggcagctgccgcagatcttgctcatgcgggaccttctgaagagaggcatcgccgtc
catcacagcgggatcctcccgatcctgaaggaggtcatcgagatgcttttctcccgaggt
ctcgtaaaggtgctgttcgccacggagacatttgcgatgggagtgaacatgcctgccagg
accgtggtgttcgacagcatcaggaaacacgacggcaccggcttcaggaacctgctgcca
ggcgaatacatccagatggcgggcagagcaggaaggagaggcctggacgccacaggaaca
gtcatcattttgtgcaaatcgggcgttcatgatatggcagatctgcacgccatgatgatg
ggaaagcccaccatcctccagtcccagttcagactgacctacaccatgatcctaaacctg
ctgcgggtcgaagcgctccgagtgaccgacatgatgaggaggagcttctctgaaagccac
agagacactcaggcacacgagaagaggatcggccatctgaagcagatgttggcgtctctt
cctcctctggaaacagagggccagctctctgatatcttaccttattatcacacagcaaca
gagatgcaaaacaccagagaagccctgcagaaagccatcatggagtctgtgaatggactc
aaagcgctgtctgtcggtcgagttgtcatcgtcaacaacaagcagcatcttaacgcgctg
ggagttattctacaggtgtccagcgactctgtgaatcgcaccttcacggcgctcatcatt
tgtgagaaggggaacgaggaagtggctggaaaagctgaggacagcacgtctttccagcac
ctgtacaacacagctctgttcatacctgaaggtccatgcagccacacggtgcagaagtta
aaacttcaggacatctccgccatcacagtgaaaaccctcaaagtgattcctgacagaata
atcgataactacaacaagaggcaacagccgcggttcagggccgaccctcccggccaggcc
atctccacggcgacgcaggagctgctgcgcctggccgaggcgaacccgggcggcgtggcc
accctggacccggtgaacgacctccagctgaagagcgtggacgtggtggagagctccatg
aggctccgcgtgctgcaggacagcctgctggacttcaactgcgtccactcgcccaccttc
gcagagcagtttgctcgtattaaggagaggatgagcgttcaggaggagctggaccggctt
ctgttcctggtatcggaccagtcactgatgctgctgcctgaataccaccagaggatcaag
gtccttcagtcgctgcagtacatcgacagcagcggcgcggtgcagctgaaaggccgagtg
gcctgtcagatcagcagccacgagctgctgctgaccgagctgctgttcgagaacgtcctg
agcccgctggcgcccgaagagagcgccgccctgctgtcctgcctggtcttcacccagaac
acgcagaccgagccgcacatcaccagcactctgaaggagagcatcgaccgcgtgctgtcg
gtggcccagcggatcgggcagctgcagcgggagtgtgggatcgcacagacggccgaggag
tttgtgggccagttcaagttcggcttgactgaggtggtgtactgctgggccagaggcatg
ccgttcgctgagatcgcgctgctcacagacgtgcaggagggcacggtggtccgctgcatc
cagcgcctggacgaggtgctgaaggaggtgcggcaggccgcccgcatcgtgggagactcc
gtcctgggcagcaagatggagaaagcctcgttggccatccgcagggacatcgtcttcacc
gcctccctctacacccactga
DBGET
integrated database retrieval system
