Poecilia formosa (Amazon molly): 103154687
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Entry
103154687 CDS
T07984
Name
(RefSeq) collagen alpha-6(IV) chain isoform X4
KO
K06237
collagen type IV alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor04510
Focal adhesion
pfor04512
ECM-receptor interaction
pfor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103154687
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103154687
09142 Cell motility
04820 Cytoskeleton in muscle cells
103154687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfor04147
]
103154687
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103154687
Exosome [BR:
pfor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103154687
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103154687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103154687
NCBI-ProteinID:
XP_007576121
Ensembl:
ENSPFOG00000003852
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MGEIGRPGPDGPQGGIGPRGPKGEKGHIGLKGPSGDKGDKGPMGVPGFRGTDGVPGHPGQ
QGSRGPPGKDGCNGTMGDPGLPGYGTGTPGYPGFQGPAGPKGQKGDPVYITDNTEGVPGE
PGPRGPPGLRGPTGPPGFQGPRGINGFPGLPGPPGPQGPEGSRGDIYRGGKGDKGDVGLP
GPSGSPGDQSLSGEKIVTAYKGDKGDPGPKGLKGYPGLPGPPGPFGYRGEYGEQGILGYP
GPRGPAGFVGPPGPSGLKGLPGEPGFLGQPGFKGPKGDQGDIGLPGPPSYFSDGSFVQGP
PGDPGFPGLPGSTGDQGPPGSTGPPGPPGAFRFGGPGAPGFPGGAGPKGDKGNPGLPAYG
PEGFQGPPGPDGPPGPPGPPGPQDSSGRPRDPCDIYPPDRPTGAPSKGPPGNPGPPGQTG
FPGNSGLKGFRGDPGDCNCGGGGGGGVGLPGLPGPQGPRGNFGFPGRKGEPGNPGSPGFN
GSPGAPGREGERGFIGRKGQKGESSFSGFGVKGDRGTPGLRGPTGETGNPGRDGLPGFAG
PPGPPGDGGVGTIGEKGFPGFPGGKGRPGAPGDPGFGYPGLPGRRGEKGEPGIPGFPGQP
GPPGPQGDKLPCTIYGEPGEQGERGRPGRPGPQGQPGFPGSPGGRGFDGAKGQKGDPGFG
GLPGTQGFPGPRGDPGVPGIPGVGYDGPKGKDGLPGPPGPKGQPGEVLGVRPGAPGVAGT
PGAPGDKGPPGSPGTPGSPGFDGRPGVSGLKGECGVDGRPGIPGLPGLPGGAANPIPGPP
GSPGSKGLIGPPGCPGYRGRKGEPGEQGFPGPAGMKGTPGFPGPNGGTGPRGPPGLPGPG
TVPGRPGTPGRKGERGFPGLMGFPGRPGRPGSPGFPGGKGFPGDRGRDGFPGGPGLFGLK
GDGGNPGPPGIPGPPSLVQKGAPGVNGAPGFEGFTGPRGDKGLPGLPGRPGSPGRPGFPV
DSKGQAGEPGFPGRPGPPGFPGPKGEGGIMGFPGLTGPRGDDGSPGFPGNPGEFGRTGAK
GPPGETFAYPGAPGVKGQTGDSGFPGSRGIDGSLGDRGFPGRRGPDGQKGIPGETGRPGT
MGPPGNPGPQGQPGFPGRRGSDGSPGPPGGPGDVGFKGLSGAPGLDGLNGLAGPKGPPGI
PGTTIGGDPGPRGAPGQKGERGVSFPGQPGFPGPKGQRGDLGTFGRPGFPGQPGPPGPST
SSNFPGPVGDPGLPGLDGEYGFQGPPGPPGPPGPGTAQGDTGDPGLPGFPGIPGPKGETG
SPGGPGFPGFSGLKGAPGDNGLAGAPGVKGLPGEPGFFGFKGRRGSPGRPGRKGAPGIPG
PYIPPPAPIGEPGLPGNKGQLGRLGEPGQPGLSGRPGLKGRPGAAGDLGRTGPPGFPGPF
GDPGIPGFPGITGDQGFPGAIGRPGIPGGAGRSIGIGYTLVKHSQTTDVPMCPQGMAQLW
EGYSLLYVEGQEKAHNQDLGQPGSCLPRFNTIPFLYCNPSETCYYASRNDKSFWLSTTAP
IPMMPVAEEQIRPYVSRCSVCEAPSQAVAVHSQDLTIPTCPPGWRSLWIGYSFLMHTAAG
AEGGGQSLMSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVDPRLEFGAPTQQE
TLKGGQERSRVSRCQVCSKIL
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagatcggacggcccggaccggatgggccacaagggggcatagggcctcgaggg
cctaaaggagagaagggccacattggacttaaaggaccatctggggacaaaggagacaaa
ggaccaatgggagtgcctggatttcgaggaactgatggagtgcctggtcacccgggtcag
cagggcagcaggggcccaccagggaaggacggctgtaacggaaccatgggggaccccggt
ctgcccggctatggcacgggcactccgggatatcctggctttcaagggccagcggggcca
aaaggtcagaaaggagaccccgtctacatcacagacaacaccgagggggtaccaggtgaa
ccaggacccaggggcccacctggtctcagaggtccgaccggcccgccgggtttccaaggt
ccaagaggaattaacggattccccggactccccggccctcctgggccccaagggccagag
gggagccgtggcgacatttatcgaggagggaaaggagacaagggcgatgtgggtcttccc
ggacccagcggttctcccggtgaccagtctcttagcggcgaaaaaattgtcactgcctac
aaaggagacaagggtgatcctggcccaaagggattaaaaggataccctggtttacctgga
ccacctggaccttttggttatagaggtgaatacggggaacagggcattctcggataccca
ggaccaagaggtcctgcgggttttgtcggaccacctggcccttctggactgaagggatta
ccgggggaaccaggtttcctgggacaaccaggattcaaaggacccaagggagaccaaggt
gacatcggactcccaggacctccaagttacttcagtgatggatcttttgttcaaggaccc
ccaggcgacccggggtttcccggccttccgggtagcaccggtgatcagggacctccagga
tccaccgggcctccgggaccgccaggcgctttccgctttggtgggccaggagctccgggt
tttcctggtggcgccgggccaaaaggagacaagggtaacccgggcttaccagcttacggc
cctgagggtttccaaggtccccctggacctgatggtcctcctggtccccctggtcctcca
ggtcctcaagacagctcaggccggcccagggacccctgtgatatctatcctcctgacagg
cccacaggtgcccccagtaaaggcccccctggaaaccctgggccgcctggccagacggga
tttccaggaaactcgggacttaaaggctttagaggtgaccccggtgactgtaactgtgga
ggaggaggaggaggaggtgtcggcctgcccgggttacctggacctcaaggacccagaggc
aactttggcttcccagggcgtaaaggtgagcccggtaacccgggttctcctggtttcaac
ggcagtccgggggcgcctggtcgtgagggtgagaggggattcattgggcgtaaaggacag
aagggggaatcgtccttctccggtttcggggtgaagggagatcgagggacacctggactc
agaggacctacgggtgaaacaggaaaccctggcagagacggtttgcctggcttcgctggc
cccccaggacccccgggtgatggtggtgttggcacaatcggtgagaagggtttcccagga
tttcctggaggcaaaggtcgacctggtgcccctggcgatcctggattcggctaccccggc
ctaccgggccgtcgaggtgaaaaaggagagcctgggatccctgggtttcctggacagcca
ggtccaccaggcccacaaggcgataagctaccttgcaccatatatggtgaacctggagag
caaggtgaacgtggcaggcctggacgaccaggcccccaaggccagccaggcttcccagga
tcccctggaggtcgagggtttgatggcgccaagggacagaagggagatcctggttttgga
ggcctaccaggaacacaaggttttcctggacccagaggagatcccggagttccaggtatt
ccgggagttggctacgatgggcccaaagggaaagacggccttccaggacctcctggaccc
aaaggccagcctggagaagtcctgggggtaagacctggagctccaggagtggctggcaca
cctggtgcacccggagacaagggcccgccaggcagtccaggaacacccggatcacccggc
ttcgatggacggcctggtgtttccggtctgaagggagagtgtggagtggacggccggccg
ggcattccgggtcttcccggacttccaggcggcgcggccaatcccatccccggtccaccc
ggatctcccggcagcaaaggactcatcggaccgccaggctgcccaggttatcgcggtcgg
aaaggtgaaccgggagaacaaggattcccgggccctgctggaatgaaaggaaccccggga
ttccctggtccaaacggaggaacaggtccaaggggaccccctggactgccaggtcctgga
accgttcctggaagacccggaacgcctggaagaaagggtgaaagaggattcccaggactg
atgggtttccccggacgaccgggtcgtcccggaagtccaggatttccaggcggaaaaggg
tttcccggagaccgtgggagagatgggtttcctggaggtcctggactgtttggactgaaa
ggtgacggaggaaaccccgggccccctggtattccaggccctcctagtttagtgcagaaa
ggtgcaccaggggtcaacggagcccccggctttgagggctttactggacctagaggtgac
aagggtctcccaggcctgcctggtcgtccgggttctccaggtcgtcccggcttccccgtg
gacagcaaaggccaggccggagagccgggtttccctgggcggcccggcccaccgggcttc
cctggaccaaagggggaaggaggaatcatgggattcccaggattgacgggaccgaggggt
gacgacggctcgccgggattccccggaaatcctggagaattcggccgaaccggagccaaa
ggtccacctggagagacgtttgcctatcctggagcaccgggagtgaaaggccagactgga
gattcaggttttccaggctctcgaggcatcgacggttcccttggcgacaggggttttccg
ggacgccgaggtcctgatggacaaaagggcattcccggtgaaacggggcgacccggaacg
atgggtccacctgggaacccggggccgcagggtcagcccggattccctgggagacgagga
tcagacgggtccccgggaccgcccggaggcccaggtgacgttggttttaaaggtttgtct
ggagcgccggggctggacggactcaatggcctcgccggtccgaaaggccctcctggaatc
ccaggtacaacgatagggggagacccaggcccccgcggtgcgccgggacagaaaggagag
agaggtgtttccttccctggacaaccaggcttccctggaccaaagggacagagaggagat
ttgggaacttttggacgtccagggttccctggacaacccggacctcctggtccaagtact
tcatcaaacttcccggggccagtgggagaccccggacttcctggattggatggagaatac
ggtttccagggccctcccggtcctcccgggccaccgggtcccggcacagcacaaggagac
acaggagacccagggctcccagggttccctggaatccccggcccaaagggagaaacagga
agtcccggaggccccggattccccggcttctctggcttaaaaggagctccgggtgacaac
gggctagccggtgctccaggtgtgaaaggattgcccggcgagcccggattctttggattc
aaagggcgtcgaggatcaccggggcgacctggacgtaagggtgctcccggaatcccaggg
ccgtacataccgccccctgcacctattggagagcctggtttacccggcaacaaaggacaa
ctcggtcgtctcggagagcccggccagcctggtctctctggacgtccaggtctaaagggt
cgccccggcgctgcgggtgacctcggcaggaccggaccgcccggttttcctgggccgttt
ggggatccgggcatccctggattcccagggatcactggagatcaaggttttcccggagcc
atcggtcgtcccggtattcccggaggcgccggccgcagcatcggcatcggctacactctg
gtgaagcacagccagaccaccgatgtccccatgtgtccccaaggcatggcccaactgtgg
gaaggatacagcctgctgtacgtggagggacaggagaaggcacacaaccaagaccttggt
cagccgggttcgtgcctccccaggttcaacaccatccccttcctctactgcaacccatct
gagacctgctactacgcgagccgcaacgacaaatccttctggctctccacgaccgcgccc
atccccatgatgcctgtggccgaggagcagatccggccttacgtcagcaggtgttcagtg
tgcgaggctccatctcaggcagtggcggtccacagtcaggacctaaccatccctacctgc
ccacccggctggaggagtctttggatcgggtattccttcctcatgcacacggcagccggc
gccgagggcggcggtcagtccctgatgtctcccggctcttgcctggaagacttccgagcg
accccgttcatcgagtgcaacggcgccaggggcacctgccactacttcgccaacaaatac
agcttctggctcaccacagtcgacccccggctggagtttggcgcgccgacgcagcaggag
accctgaagggcggtcaggaacgctccagggtcagccgctgccaagtctgcagcaagatc
ttgtag
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integrated database retrieval system
