Poecilia formosa (Amazon molly): 103155749
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Entry
103155749 CDS
T07984
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103155749 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103155749 (ddx46)
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103155749 (ddx46)
Spliceosome [BR:
pfor03041
]
Complex A
U2 snRNP components
U2 related factors
103155749 (ddx46)
Complex B
103155749 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
103155749
NCBI-ProteinID:
XP_007577619
Ensembl:
ENSPFOG00000004966
UniProt:
A0A087XH26
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGTRSKSRSPDNKRSKKDDRDRSRRDRSRSRDRRRSRSRDRKR
ARRSRSRDRRRSRSRERKRSRSRSRTRRSRTGSPAKSKKSDEKAKSKEKEKESVDPVSEK
KKVKEEKEDEKVEDVSSKQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELE
EMKQGKKWSLEDDDDDDEEGPALMEVDEDEEEGEGKEEGKEKDAEEVKKEEGEAEKEAPM
EQQVEEDEVDPLDAYMEEVKQEVKKFNIGAMKGNDKKGATTVTKVVTVVKTKKQPMTHKK
KGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHTKIQYESYRKNFYVEVP
ELAKMTTEEVNAYRLELEGIIVKGKGCPKPIRTWVQCGVSMKILNSLKKHAYEKPTPIQA
QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEGEGPISVIMTPTRELALQ
ITKECKKFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNL
RRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILAKPLE
VQVGGRSVVCSDVEQHVLVIDEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLM
KASYPCLSLHGGIDQYDRDSIINDFKTGVCRLMVATSVAARGLDVKQLILVVNYSCPNHY
EDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDILKALELSGSAVPPELEQLWASFKDQQ
KAEGKVIKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESM
FNSKKRVKDLSAPGAATGPAGAVTAAAAAPGGPAGLMPGSAGNNQKLEMAKRLALKINAQ
KNLGAEAQDVMQQATNAILRGDPIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQA
AEQAETVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEG
ERKIYLAIESASELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtccagacactacaggaagcgctcagcgtcccgcggccggtcgggcacc
cggtcgaagagtcgctccccggacaacaagcgctcaaagaaagacgaccgagaccgaagc
aggagggatcggtccaggagcagagaccgcaggaggtcccggtccagagacaggaaaaga
gcccggcggtcccgcagcagagaccggaggaggtccagaagccgggagaggaagagatca
cgcagtcggagtcgaactcgcaggtcccgaaccggcagcccggcaaagagcaagaagtca
gatgaaaaagccaagagcaaagaaaaggaaaaggagagcgtcgacccagtttccgagaag
aagaaggtgaaagaggagaaggaagatgagaaggtggaggacgtaagttcaaaacaagat
tttgaccaaaacaaactggaggaagaaatgaggaagaggaaggagcgcgtggagaaatgg
agagaggagcagaggaagaaggcgattgaaaacattggagagataaagaaagaactggag
gaaatgaaacagggcaagaaatggagcctggaggacgacgacgatgacgatgaggagggt
cctgctctgatggaagtggatgaagatgaagaggagggggaaggaaaggaggagggaaaa
gagaaggatgcagaggaagtgaagaaggaggagggcgaggctgagaaggaggcgccgatg
gagcagcaggtggaggaggacgaggtggatcctctggacgcctacatggaggaggtcaaa
caggaagtgaagaagttcaacatcggagccatgaaggggaacgataagaaaggagcaacg
acagtaaccaaagtggtgacggtggtgaagaccaagaaacaaccgatgacgcacaagaag
aagggcgagctgatggagaacgaccaggacgccatggagtactcatcggaggaagaggag
gtggacctgcagacggctctgacgggtttccagaccaagcagaggaaagttctggagccg
gtcgaccacaccaagatccagtacgagtcgtaccgcaagaacttctacgtggaagttcct
gagctggccaagatgaccacagaggaagtgaacgcctacaggctggagctggaaggcatc
atcgtcaaaggcaaaggttgtcccaaacccatcaggacctgggtgcagtgcggcgtgtcg
atgaagatcctcaactccctgaagaaacacgcgtatgagaagccgacgccgatccaggcc
caggccatccccgccatcatgtccggcagagacctgatcggcatcgccaagaccggcagc
gggaagaccatcgccttcctgctgcccatgttccgccacatcatggaccagcgccccctg
gaggagggagaggggccaatctctgtaatcatgactcccaccagagagctggctctgcag
atcaccaaggagtgtaagaagttctccaaaccgctggggctgcgagtggtgtgtgtttac
ggagggacgggaatcagcgaacagattgcggagctgaagcgcggagcagagatcatcgtt
tgcactccagggaggatgattgacatgctgggcgctaacagcggccgggtcaccaacctg
cggagggtcacgtacgtggtgctggacgaagcagacaggatgtttgacatgggctttgag
ccacaggtgatgcgtatcgtggacaacgtgcgtcccgaccgacagacggtcatgttctcc
gccaccttccccagagccatggaggcgctggcccgcaggatcctggccaagcccctcgag
gtgcaggtcggaggtcgcagcgtggtctgctcagatgtggagcagcacgtgctggtgatt
gatgaggaaaagaagttcctgaagctgctggagatcttgggtcactaccaggagaaaggc
tcagtcatcatctttgtggacaaacaggagcatgcagacggcctgctgaaggacctgatg
aaagcctcctacccctgcctgtctctacatggaggcatcgaccagtacgaccgagacagc
atcatcaacgactttaagacgggagtgtgtcgcctgatggtggccacctcagtggcggcc
agaggcttggacgtcaagcagctcatcctggtggtcaactacagctgccccaaccactac
gaggactacgtccacagggcggggcgcaccggcagggcgggcaacaagggttacgcgtac
accttcatcacagaggaccaggctcgctacgctggcgacatcctaaaggccttggagctg
tcgggctccgctgttcctccagaactggagcagctgtgggcttccttcaaggaccagcag
aaggcggagggtaaggtgattaagagcagcagtggcttctcagggaaaggctttaagttc
gatgagacggagcatgctctggccaacgagaggaagaagctgcagaaagctgcgctggga
ctgcaggactctgacgatgaggacggcgccttggatatcgaggagcaaatagaaagcatg
ttcaactctaagaagcgggtgaaggacctgtcagctcccggcgcggccaccggtcccgcc
ggcgccgtcacggctgcagcggcggcccctgggggcccggcgggcctcatgcccgggtcc
gctggaaacaaccagaagctggagatggccaaaaggctggcgctcaagatcaacgctcag
aagaacctgggcgccgaggctcaggacgtgatgcagcaggccaccaacgccatcctgcgc
ggcgaccccatcatgaccccgtcggtgtcggccaagacgatcgcggagcagctggcggag
aagatcaacgccaagctgaactacacgccggtggagaagctggaggaggagcggcaggcg
gccgaacaggccgaaaccgtcaagagatacgaggaggagctggagatcaacgacttccct
cagacggcccggtggaaggtgacgtctaaagaggctctgcagaggattggagaatactct
gaggcggccatcaccatcagaggaacgtatttccctccaggcaaagagccgaaggaggga
gagcgaaagatttatctggctattgagagtgcgagtgaactggctgtgcagaaagccaaa
acggagattacacggctaataaaggaagagctcatcagattacaaaattcctaccagcca
acaagcaaaggccggtacaaggtgctgtag
DBGET
integrated database retrieval system
