Poecilia formosa (Amazon molly): 103156038
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Entry
103156038 CDS
T07984
Name
(RefSeq) serine/arginine-rich splicing factor 4
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03040
Spliceosome
pfor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103156038
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103156038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103156038
Spliceosome [BR:
pfor03041
]
Common components
Common spliceosomal components
SR proteins
103156038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103156038
NCBI-ProteinID:
XP_007578003
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDSYGGGYWGGGRSSGYSSSSSSRSRSGRDKYGPPVRTEYRLIV
ENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRAMDKLDGTDINGR
KIRLVEDRPRKRRSYSGSRSRSRSRRRSRSRSHRSSRSRSRSHSRSRSRSNKRRHHSRSR
SERKSRSKSGERKSRSRTNRSRSGSHKSKSRSRSQKSRSRSADRKSKSRSKSRSKVKSER
DSRSRSKEMDVGAGEDNNKKSRSRSASPVENGKEERTAKSASRSPSPQEDERRSKSREKR
SASRSVSRSRSRSRSRSASQDSVQHRKQGATNMSGKVNMDAQSKEADGTTTDPSPSPAGE
TILICDNVTKKARAMPHATTTTALLLPARRYICVCLVKDFMRQAGEVTYADAHKERTNEG
VIEFRSHSDMKRAMDKLDGTDINGRKIRLVEDRPRKRRSYSGSRSRSRSRRRSRSRSHRS
SRSRSRSHSRSRSRSNKRRHHSRSRSERKSRSKSGERKSRSRTNRSRSGSHKSKSRSRSQ
KSRSRSADRKSKSRSKSRSKVKSERDSRSRSKEMDVGAGEDNNKKSRSRSASPVENGKEE
RTAKSASRSPSPQEDERRSKSREKRSASRSVSRSRSRSRSRSASQD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtctacatcggacgtctaagttatcacgtccgcgaaaaggacattcagcga
tttttcagcggatatggaaaactaatggaaatcgacttgaaaaatggctatggattcgtg
gagtttgaagacaaccgggatgccgacgatgccgtgtatgagctgaacggaaaggatttg
tgcggagagcgagtgatcgttgagcatgcccgtggcccgcggcgagaccgagatagctac
ggagggggttactggggcggagggcgcagtagtggttacagcagcagcagcagcagcaga
agccgctctggaagggacaagtatggacctccagtccgtacagagtaccgcctcattgtg
gaaaacctgtcgagccgctgcagctggcaggacctcaaggacttcatgcgtcaggcaggc
gaggtgacgtatgccgacgcccacaaggagcgaaccaacgaaggggtgatagagttccgg
agtcactctgacatgaaacgggccatggacaagttagacggcacagacatcaacgggcga
aagattcgattggtggaggacagaccccgcaaacgaaggtcttactctggcagccgctcc
agatctcgaagtcgccgccgctcccgcagcagaagccacaggagctcaaggagtcgctcc
agatctcactccaggtcccgttcccgtagcaacaagagaaggcatcattctcgctcgagg
tctgagaggaagtctcgttccaagtcgggagaacggaaatcgcgctctcgcaccaacaga
tctcgttctgggtcccacaagtccaaatctcgctcgcgctcacagaaatctcgttcccgt
tcagccgaccggaaatcaaagtcccgctccaagagccgctctaaggtcaagtcggagcgg
gattctcgtagcagatccaaggagatggatgttggtgctggtgaagacaacaacaagaag
tcccgcagccgttcagcttcccctgtagagaatgggaaagaggagcgcaccgccaaatca
gcgtcccgctccccgtccccacaggaagacgaacgccgatctaaatccagagagaagcgc
tcagcgtcccgctcagtctcccgctcaaggtctcgttcacgatctagatcagcctctcaa
gattcggtccaacacaggaaacagggagccaccaatatgagtggcaaagtaaacatggac
gctcaatccaaagaagctgacggcacaaccactgacccgtcgccctcccctgccggcgaa
accatcctcatctgcgacaatgtcaccaagaaagcacgcgccatgccccacgccaccacc
accacagctctcctcttgccagcacgtcgttacatttgtgtctgtctcgtgaaggacttc
atgcgtcaggcaggcgaggtgacgtatgccgacgcccacaaggagcgaaccaacgaaggg
gtgatagagttccggagtcactctgacatgaaacgggccatggacaagttagacggcaca
gacatcaacgggcgaaagattcgattggtggaggacagaccccgcaaacgaaggtcttac
tctggcagccgctccagatctcgaagtcgccgccgctcccgcagcagaagccacaggagc
tcaaggagtcgctccagatctcactccaggtcccgttcccgtagcaacaagagaaggcat
cattctcgctcgaggtctgagaggaagtctcgttccaagtcgggagaacggaaatcgcgc
tctcgcaccaacagatctcgttctgggtcccacaagtccaaatctcgctcgcgctcacag
aaatctcgttcccgttcagccgaccggaaatcaaagtcccgctccaagagccgctctaag
gtcaagtcggagcgggattctcgtagcagatccaaggagatggatgttggtgctggtgaa
gacaacaacaagaagtcccgcagccgttcagcttcccctgtagagaatgggaaagaggag
cgcaccgccaaatcagcgtcccgctccccgtccccacaggaagacgaacgccgatctaaa
tccagagagaagcgctcagcgtcccgctcagtctcccgctcaaggtctcgttcacgatct
agatcagcctctcaagattag
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