Poecilia formosa (Amazon molly): 103156427
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Entry
103156427 CDS
T07984
Symbol
patl1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103156427 (patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103156427 (patl1)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103156427 (patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
103156427 (patl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
103156427
NCBI-ProteinID:
XP_007578527
Ensembl:
ENSPFOG00000007768
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MFRFQSLDDDCTLEEEDDGLIEEEDEIDQFNDDTFGAGAIDDDWQEEHKRLAELDERDGL
GAGRGLGGGDSSPGPASAAGRLPLLGFSSGPPGQDADERSGGGDLAESLARFILDADPAI
AGVGAAERPGSAPGPAGPVLSALRGPDQPRVLQQPASIPPKHQLPPGPPASGLPASSVLS
YQQQQHLLRRGAAPMGQMNSHSIWDNSMGFGPVSVTPGLVTHMEDSPLMSIIKEVGLPKR
PPQGRSDEGHDLSERAPPPRSSSPVIGSPPVRAVPIGTPPKHLLSLNHQIHHPTAVHVRA
PVQHRFPAPFPERLSPNTLLNLANSPLCRGPFPPRVGPVLSQLQRAQLLNSQVAGFPRGG
PGPPLLAGGGFRPFFGGPPPPHGHRMGPLPPHGPPNHTPPIRHNTTHLHPQHRRMLTQRM
QSRGGDRVRTGLDRRSRDPYSNLMSQKEKEWVTKIQMMQLQSTDPYLDDYYYQNYYEKME
KRQEKERDSSSRKEHTTKLITPQVAKVEHTYRPVQFAGSLGKLTVSSVNNPRKMIDAVVT
TRSDDEEKREKQVWNKRRQVLYTVEKMYSLLLEVQDFEKRFVQTPEEDRDALMEQHKSNT
EQLSNSLQDGDWEDRVSDEQCVMIMSVRKGKRLVARLLPFLPAAQAAAVVMVIARNLPAL
AKKDKQDQALCCLVEPVSAVIQSLSSSALTDLLQELQGGEGQLAAALQNKVTHRWRTGAA
SVSGRKPVGHTWTNQIDG
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgatttcagtccctggatgacgactgtacgctggaggaagaggacgatgggctg
atcgaggaggaagatgagatcgaccagttcaatgacgacacgtttggagccggcgccatc
gatgacgactggcaggaggagcacaagcggctggcggagctggatgagcgggacgggctg
ggcgccgggcggggcctggggggcggagactcctccccaggccccgcctccgccgcgggt
cggctccctctgctcggcttctcctctgggccgccgggtcaagacgcagacgagcggtcg
ggaggcggcgacctggccgagtctctggcccgcttcattctggacgccgacccggccatc
gccggcgtcggagcggcagagaggcccggttcggctcccgggccggccggcccggttctg
tcggcgctgcggggcccggaccagcccagagtcctgcagcagcccgcctccatccccccc
aaacaccagctgcccccgggaccccccgcctcaggcctgccggcctcctccgtgctcagc
taccagcagcagcagcacctcctgcgcagaggagccgctccaatgggccagatgaactct
cacagcatctgggacaacagcatgggcttcgggccggtcagcgtcacgccgggactcgtc
acacacatggaggacagtccactgatgtccatcatcaaggaggtggggcttccgaagcgc
ccgcctcaggggaggagcgacgaaggtcacgacctgtcagagagggccccgcccccccgc
tcctcctctcctgtgattggctctcctccggtgagggcggtgcctatcgggacgccgccc
aaacacctgctgagcctgaaccatcagatccaccaccccacggcggtccatgtcagagcc
ccggtccagcaccggttccccgctccgttccctgagcgcctgtcccccaatacgctgctc
aacttagccaactctccgttgtgccgcggtccgttccctcccagagtcggcccggttctg
tctcagctgcaacgggctcagctgctcaactcccaggtggcgggttttcctcgcggcggc
cccggccctcccctgctggccggcggcgggttcaggcccttcttcgggggcccccctcct
cctcacggccacaggatgggccccctgccgccccacggcccccccaaccacacgccgccc
atcaggcacaacacgacgcacctccaccctcagcaccgccgcatgctgacgcagcgcatg
cagagccgcggcggcgaccgggtcagaaccgggctggaccgccgcagccgggacccgtac
agcaacctgatgagccagaaggagaaggagtgggtgaccaagatccagatgatgcagctg
cagagcaccgacccgtacctggacgactactactaccagaactactatgagaagatggag
aagcgtcaggagaaggagcgagacagcagcagcaggaaggagcacaccaccaagctcatc
acgccgcaggtggccaaggtggagcacacctaccggccagttcagtttgcaggatctctg
gggaagctgacggtgtccagcgtcaacaacccgaggaagatgatcgacgccgtggtaacg
acccgctccgacgacgaggagaagagggagaagcaggtgtggaacaagaggcgccaggtg
ctgtacaccgtggagaagatgtacagtttgctgctggaggtccaggactttgagaaacgc
ttcgtccaaacgccagaggaggacagagacgccctgatggagcaacacaagagcaacacg
gagcaactgagcaactcgctgcaggacggggactgggaggacagggtgagtgatgagcag
tgtgtgatgatcatgtcggtgaggaaagggaagcggctcgtcgccaggctcctccccttc
ctgcctgcagcgcaggctgctgccgttgtcatggtgatcgcacgcaacctccctgcctta
gcaaagaaggataagcaggaccaggcgttgtgctgcctggtggagccggtctctgcagtc
atccagtctctgtccagctccgccctcactgacctgctgcaggagctgcagggcggcgag
ggccagctggccgccgcgctgcagaacaaggtaacgcatcgatggaggacgggggcggct
tctgttagtgggaggaaacccgttggccacacctggaccaatcagatcgatggatga
DBGET
integrated database retrieval system
