Poecilia formosa (Amazon molly): 103156474
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Entry
103156474 CDS
T07984
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03440
Homologous recombination
pfor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103156474 (palb2)
03460 Fanconi anemia pathway
103156474 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103156474 (palb2)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103156474 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
103156474 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
103156474
NCBI-ProteinID:
XP_007578594
Ensembl:
ENSPFOG00000022267
UniProt:
A0A096LUH1
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MDANIGNILHSEEQLRNTLQCDDKEKLRRKLAYLQREYLKTAQRLKRAECVDALKRHVKN
RISLQKDLNNPEIPSNACITPSSFTSNTNDATPGSLQCQGVVESSTIRRQQATRFSLSGE
RTSSKTPDLSSDVAGSHRPSPALRLRSRRSRLRWEKRSANAPKGSDNSQRQQELTGNRRP
GDEEQTIKDEDVFIESEELFSDPESESPSLLLTHWSTQEHTKPGDKTGNGNQRSQEETRE
KIGPEVDGKCSRPALTTESRGQNARENSLINKMGEDGVSQSQVRKPVACEEGSHDGAQMT
ATEKHEESVEIIEENNRTTADENAVHLLDSCTLVEGLLFPVEYYIRTTRHMTLSQTLPDV
QAVIMSQLSAGRQRRSRGRSRRANQDVQRSDRHTQTDSPSSTIPSTSVDSLKPPNTSKDC
SQSSSDFSASGISEAPVSLRGPGVRPPKGTRRGRGRGRPPRQQLLKEGCSLTSGGLQPPL
SPAPTTQSIHQADETNTEPVLFQQTPTHSCPVQPSSSVSGTPVGFTAEHQEKVYPIFLKS
STSRPQQMNTGSSDSQALLLPSSSSSSQTAQLSLPCLISRLKSLDIQQDFHLPDDQFASL
KLHKLRQVAVESTPSHNTRRRSSCRRSAVDLLMPCSHPLKSTSTIRNSTRPNKSKRTSPQ
QTQCTVTDNLIGTWLNEELCNPSIPETNAELSADALNTSAEAVSVVQGFTEELDAGTENW
AALSITCTSISTDEPQGLVDQTPHKENDVQLSDEPEVEHSEHEKQPSLEELGLIDGRITQ
MLSFDFSESKAAEDAPASCTNSTAANPPVNNPNPQYPAEDFAEPTKTDSSEDGTIKSKAS
QFLFKSPLDAMGCPCTGLPSVYHPSPTLATSPVLPSLGITPNSARLPSDSSPSAPPLCLP
PSPSPSTQDLSPLDLCPGASITSLPSILPPPSLCSQLQDLSDPLAPRDQGDREEPDDCPT
QSRIQLQGSAVEVGITTDGSAEKFLLRCTHTLEAPAGGSLVDVCCVSDPSAGVCVAAAGK
WAVCLWSQTSECNWSLKHTWTFSEPVINVFPVPDSAGLILVSLGQLEIRQLRLLSCCSLR
QTLILEDIIQAVAGLFSSRVVTSSDSAAGSTLQVFTLSDSISLLTPQPLVSPGVCVSALA
PVEGLPDALIGTDEVGHLFIWNLKSGHLLSRVLLEDSLSNTSCLKGYSYCGVLLVLLQHQ
FLSSLDQEEKKASEKCLLSEERSKPALFSLVGINPLSGRSVLSTWLYPPDGWTGRLCEVD
VNRSSVVGLSQSGCVCVWELGEGGTSQMMEAQEDGYWQLARWGHKDTLVIGHQNGDVSLY
PYGVRPTKKGAKADAEAPPL
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaatattggtaatattctgcacagtgaggaacagctgaggaacacactgcag
tgtgatgacaaggaaaagctccgtagaaaactggcatatttacaaagggagtatctcaaa
acagcccagagactaaagcgtgctgagtgtgtggatgcgttgaagaggcatgtgaaaaac
aggatttctctgcagaaagacctgaacaatccagagattccatctaatgcctgcattacc
ccctcctcattcacatctaacacaaacgatgcaactccaggttcactacagtgtcaaggt
gtagtagaatccagtacaatcaggagacaacaagcaacacgattctcactttctggagaa
cggacttcctccaaaaccccagatctcagtagtgacgtcgctggcagccacagacccagc
ccagccttgcgcctgcggtcgagacgcagccgcttgcgctgggaaaagaggagtgccaac
gctcccaaaggctcagacaacagccagcgacagcaggagctgacaggaaacagaagacct
ggagatgaggagcagacgatcaaagacgaagatgtcttcattgaaagtgaggagctgttt
tctgatccagaatctgagtccccctctctgctactcacacattggagcacgcaagaacac
accaaacccggggacaaaacaggaaatgggaatcaaagatcccaggaagaaacaagggaa
aaaattggtccagaagttgatggaaaatgcagtagacctgctttaacaacagagagtaga
ggacaaaatgctagagaaaacagtttaataaataagatgggagaagatggtgtcagtcaa
agccaagtgagaaaaccagtggcatgtgaagagggcagccatgatggagcccagatgaca
gcaactgaaaaacatgaggaatctgtagaaataatagaggaaaataatcggaccacagca
gacgagaacgctgtacatctcctagactcctgcacattagtggaaggactacttttccct
gtagagtactacattagaaccacaaggcacatgacgctatcccagaccctgccagatgtc
caggctgtcataatgtcccagctgagcgcagggcgacaacgcaggagtcgaggccgcagc
aggagggcgaaccaggacgtacagcggtcagaccggcacactcagacggattcaccctct
tccacaattccgtccacatctgtggattctctgaagccacccaacacttccaaagattgt
tcccagagttccagtgacttttctgcctctggcatttcagaagctcctgtttcgcttcgg
ggccccggcgtccgtccacccaaagggacgaggagaggcagaggcaggggaagacctccg
agacaacagcttcttaaagaaggatgtagcctgacctcaggaggtctccagccccccctc
agccctgcaccgactacccagtcgatccatcaagccgatgagacaaacaccgaaccagtg
ttattccagcagactcccacccacagctgtccagtccaaccttcttcttcagtcagtgga
actccagttggttttactgctgaacaccaggagaaagtctatcctatctttctgaagagc
agcaccagcagaccccaacagatgaacacaggctcatcagactctcaggctcttctcctg
ccctcctcctcttcatcgtctcagacagctcagctttctcttccctgtttgatcagccgc
ctgaagagcctggacatccagcaagattttcacctccctgatgatcagtttgcctctttg
aagctgcataagctccgtcaagttgccgtggaatcaaccccgtcacacaacacacgtaga
cgctccagctgccggcgcagcgccgttgatctgctgatgccctgttcccacccgctcaaa
tccacatctaccatcagaaattctacccgtccaaacaagagcaagcgaacatctccacag
cagacacaatgcacagttacagataatttgataggcacgtggttaaatgaagagctttgt
aacccaagtattccagaaacaaatgcagagctcagtgcggacgctctcaacacctcagca
gaagctgtttcagtggtgcaagggtttactgaagagcttgatgctggaactgaaaactgg
gcggccctcagcattacatgtacatctataagcacagatgaaccacagggtctggtggac
caaacaccacacaaagaaaatgatgttcaactttcagatgagccagaagttgagcattct
gaacatgaaaagcaaccctctttagaagagctcggactcatagatggacgcatcactcag
atgctttcctttgatttctctgaaagtaaagcagcagaggacgctccggccagctgcact
aacagcactgcagcaaaccctcctgtaaataacccaaacccacagtatcctgcagaagat
tttgcagaacctactaaaacagactcttctgaggacggaacgattaaaagtaaagcctct
cagttcttgtttaagtctcctctggatgcaatggggtgcccctgtacaggcctgccatcc
gtctaccatccgtcacccactctagctaccagtccagtcctgccctccctgggaatcacc
cctaattctgctcgcctgccttctgactcctctccctctgctcctcctctctgcctgcct
ccgtctcccagcccgtccacccaggatctgtctcctctggatctttgtcctggtgcatcc
atcacctccctcccttccattcttcctcctccctctctctgcagtcagcttcaggattta
tcagaccctctggctccaagagatcagggtgacagagaggagcctgacgactgcccgact
cagtccaggatccaactgcaaggctcggctgtggaagtgggaataacgacagacggctct
gcagagaagttcttactgaggtgcacacacacactggaggcgccagcagggggctctctg
gtggatgtgtgctgtgtgtcagacccatcggctggtgtgtgtgtcgcagcagcaggaaag
tgggcagtgtgcctgtggagccagacttcagaatgtaactggagcctcaaacacacctgg
actttcagtgagcctgtgataaacgtgtttcctgtcccagactcagcaggcctgatattg
gtgtctcttggtcagctggaaataagacagctgagactcctgtcctgttgcagcctcagg
cagacgctgatacttgaggacatcatccaggcagtggctggcttattcagctccagagtg
gttacctcctccgactcggccgcaggctccactctgcaggtgtttaccctgtcagacagc
atcagcttgctgactcctcagcctctcgtgtctcctggtgtttgtgtgagcgccctcgct
ccagtagaggggcttcctgacgctctcatcggcacagatgaagtaggacatcttttcatc
tggaatttaaagagtggccatctgctgagcagagtgctgcttgaagacagtttatccaac
acatcctgtctcaaaggttactcctactgtggagtgttgttggtcctgctgcaacatcag
tttctaagctccctggaccaagaggagaaaaaggcaagcgagaaatgcttgctttcagag
gagaggtcgaagccagctctgttctctttagtcggcatcaaccctctaagtggaagatct
gtcttatctacttggctgtatcctccggatggctggactggcaggctttgtgaggtggac
gttaaccgcagcagcgtggtgggcctgagtcagagcggctgcgtctgtgtgtgggagctc
ggagaaggggggacgtcccaaatgatggaggctcaggaggacgggtactggcaactggct
cgatgggggcacaaggacaccctggtgatcgggcatcagaacggagacgtctctttatat
ccctacggcgtgaggccgactaagaaaggtgctaaagctgacgctgaagctccaccgttg
tga
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integrated database retrieval system
