Entry |
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Symbol |
herc4
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Name |
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
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KO |
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Organism |
pfor Poecilia formosa (Amazon molly)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pfor00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103156981 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:pfor04121]
103156981 (herc4)
Enzymes [BR:pfor01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103156981 (herc4)
Ubiquitin system [BR:pfor04121]
Ubiquitin ligases (E3)
HECT type E3
103156981 (herc4)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1047 aa
MLCWGNASYGQLGLGGIDDEIVVEPRRCEFFHGKRVSDVGCGRRHTAFLLDDGTVYTCGC
NDLGQLGHDKSRKKPEQVVALDAQIILALSCGESHTLALNDKGQVFSWGLGSDGQLGLNN
FEECIRVPRNIKSLSDVQVAQVACGFWHSLALSRGGQIFSWGQNRYGQLGLGLTGQSVST
PQAVQSLQAIPFAQLAAGGAHSFALTLSGAVFGWGRNKFGQLGVNDTNDRCFPTLLKSLR
SQRVIYVSCGEDHTAVLTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNTVTQIS
CGRQHTLAFTPACGKIYSFGLGGNGQLGTRATCNRKSPSPVKGPWAASCPSEENDLEQSC
WVKRIYAGGDQSFAHYCSTTEPQDMEILTVPDPQRRVCTLNEEIIQKWLNNSPGRLPVDM
SNEIDLVFSSACCLNGSFLSTSHPDHFSTSSKYSGVDMNMARLLLHRLVQQDHPKISQQV
AASLEKELIPKLSSSPPDIEALRLYLSLPESPLFSDRSNYITITIPFAKCVVSLKEAPLK
VLGNWWSTFEPLFFQRLVDLYKDVVVFLLQMHKMGIPPAEQRIFTCFLDTSLRFLEILHK
VNEKSGSIIQYDKFYIHELDALIDIRNDYVTWIQRQMYPMGRDGVVTLCKYPFVFDAQAK
TALLQTDAVIQMQMAVDQAQLQNFSSMFLPAVESVNPCLILIVRRENIVGDTMEVLRKSK
NVDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMKELLDPKYGMFRYYEESRLIWFSHKTFE
DFDLFNLIGVICGLAIYNFTIVELNFPLALYKKLLKRKPTLEDLKELMPDVGRSLQELLD
YTEDDIEDTFCLNFTITEDNYGATEVLELVPNGENINVNKSNRQEFVDAYVNYVFNKAVA
PLFEGFYSGFHKVCGGRVLDLFQPSELQAMIIGNTNYDWTELEKSTEYKGEYWAEHPTIK
LFWEVFHELPLEKKKMFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFNLLD
LPKYSSIETLREKLLHAIDHNQGFNLA |
NT seq |
3144 nt +upstreamnt +downstreamnt
atgctgtgttggggaaacgcctcctacggacagctcggcctgggcgggatcgacgacgag
atcgtagttgagccgcggaggtgcgagtttttccacgggaagcgagtgagcgacgttggc
tgcggccgtagacacacggccttcctgctggacgatgggaccgtctacacctgcggctgc
aacgacctgggccaactggggcacgataagtccaggaagaaaccagagcaggtcgtggcc
ttggacgcacagattatcttggcgctgtcctgcggggagtcgcacacgctggccttaaac
gacaaaggccaggttttctcttggggactcggctcagacggacagctgggtttaaataac
tttgaagaatgtattcgagttccgaggaacatcaagagtttatcagatgtacaggtagcc
caggtggcttgtgggttctggcactcactcgctctctccagaggcggccagatcttctcc
tggggtcagaaccgatacggccagctggggctgggcctgacgggtcagagcgtctccacg
cctcaggccgtccagtcgctgcaggccattcccttcgctcagctggcagcaggtggcgct
cacagcttcgccctcactctctctggagccgtgttcggctggggccgcaacaagttcggc
cagctgggggtcaacgacaccaacgatcgctgcttcccaactctcctcaagtccctgaga
tcccagagagtgatctacgtctcctgtggagaagatcacacagctgtgctcacaaaggaa
gggggtgtgtttacgtttggagcaggaggatacggacagctcggccataactccaccaac
catgaaatcaaccccaggaaggtgtttgagctcatgggaaacacagtcactcagatctca
tgtggaaggcagcacacgctggctttcacgcccgcttgtgggaagatctactcgtttgga
ctgggagggaacggccagctgggcacacgcgccacctgcaacaggaagagcccctccccc
gttaaaggaccctgggccgcttcctgtccctcagaggagaacgacttggagcagagctgc
tgggtcaaaaggatttacgctggaggagatcagagctttgctcattattgcagcactact
gaacctcaggacatggaaattttgacagtaccagatcctcaaagaagggtttgcaccctg
aatgaggagatcatacagaaatggctgaacaactcaccaggacgactcccagtcgacatg
tccaatgagatcgacctggtgttctcctccgcctgctgcctgaacggctcctttctgtcc
accagtcacccggatcacttcagtaccagcagtaaatattctggggtggatatgaacatg
gcccggctgcttctccacaggctggtccagcaggaccacccaaagatttctcagcaggtt
gctgccagcctggagaaggagctgattcccaaactgagcagctctcctccagacatcgag
gccctgaggctctacctgtcgctgcctgaaagccctctgttcagcgaccgcagcaactac
atcaccatcaccatcccctttgccaaatgcgtcgtcagcctgaaggaggcgccgctgaag
gtcttagggaactggtggtccacattcgaaccgctgttcttccagcggcttgtcgatctc
tacaaggacgtcgttgtgtttctgctccagatgcacaaaatgggcattcctccagccgag
cagcggatcttcacctgcttcttggacacttcgctccggttcctggagattctgcacaag
gtgaacgagaaatcaggaagcatcatccagtacgacaagttctacatccacgagctggac
gccctgatcgacatcaggaacgactacgtcacctggattcagaggcagatgtaccccatg
ggccgtgacggtgtggtgactctctgcaagtatcccttcgtcttcgacgctcaggccaag
acggcgctgcttcagacagacgccgtcattcagatgcagatggcggtggatcaggcgcag
ctgcagaacttcagctccatgttcctgcccgctgtggagtcggtcaacccctgcctcatc
ctcatcgttcgcagggagaacatcgtgggcgacaccatggaggtcctcaggaagtccaag
aacgttgactacaagaaaccactgaaggtgatctttgtgggagaagatgcagtggatgct
ggaggagtcaggaaggagttcttcctcctgatcatgaaggagctgctggatcccaaatat
gggatgtttcgctactatgaggaatccagactcatctggttttcacacaagacgttcgag
gactttgacctgtttaacctcatcggggtcatctgtggtctagccatctacaacttcacc
atcgtagagctcaacttccctctggcgctctacaaaaagctcctgaagaggaagccaacg
ctagaagacctgaaggagctcatgccagacgtgggaaggagcctgcaggaactactggac
tacactgaagacgacattgaagacactttctgtttgaatttcactattactgaggataac
tacggagccactgaggtcctggagttggtaccaaacggtgaaaacattaatgtcaataag
tcaaaccggcaggagtttgtggacgcctacgtgaattacgtctttaacaaggcagtggct
ccgctgttcgagggattttactcaggtttccacaaagtgtgcggtgggagggttttagat
ctgttccagccgagcgaactgcaagctatgatcattggcaacaccaactatgactggaca
gagctggagaagagcactgaatataaaggagagtactgggccgaacatcccaccataaag
ctcttctgggaggtcttccacgaacttccgctggagaagaagaaaatgtttctattgttc
ctcacaggaagcgaccgcatccccatcctgggcatgaaaagcctgaagctggtgatccag
ccgaccggcggaggggagcactacttgcctgtagcccacacctgcttcaacctgttggac
cttcccaagtactcgagtatagaaacgctgagagagaagcttttacatgcgatagatcac
aatcaaggcttcaacctggcctga |