Pseudomonas fortuita: OZ911_02615
Help
Entry
OZ911_02615 CDS
T10310
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pfou Pseudomonas fortuita
Pathway
pfou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OZ911_02615 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfou03021
]
OZ911_02615 (rpoA)
03400 DNA repair and recombination proteins [BR:
pfou03400
]
OZ911_02615 (rpoA)
Enzymes [BR:
pfou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OZ911_02615 (rpoA)
Transcription machinery [BR:
pfou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OZ911_02615 (rpoA)
DNA repair and recombination proteins [BR:
pfou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OZ911_02615 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
WAP64322
LinkDB
All DBs
Position
572454..573455
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQTDEDESRSIGRLQLDASFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgactccccgccacattgatgtgcaggtggtcagt
ccgacccgcgccaagattacgctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgatggcgtactccacgagtactccgcgatcgaaggtgtacaggaagacgtaattgaa
atcctgttgaacctgaaaggcctggctatcaaactgcacggtcgtgacgaagttacgctg
accttgtcgaaaaagggttcgggggtggttaccgctgccgatattcagctggatcacgat
gtcgagatcgtcaaccccgatcacgtaatcgcgaacctggcgtcgaacggcgccctgaac
atgaagctcactgtagctcgtggtcgcggttacgagccggccgactcccgtcaaaccgac
gaagacgaaagccgtagcattggccgtctgcagttggacgcttcgttcagcccggtgcgt
cgtatcgcctatgtggtcgaaaacgcccgtgttgaacagcgtaccaacctggacaagctg
gtcattgatctggaaaccaacggcaccctggatcctgaagaggctatccgccgcgctgcg
accatcctgcaacagcagctggccgcgttcgtcgacctcaaaggtgacagtgagcctgtc
gtagtcgagcaggaagacgagatcgatccgatcctgctgcgtccggttgacgacctggaa
ctgactgtacgttcggccaactgcctcaaggcggagaacatctactacatcggcgacctg
attcagcgtaccgaagtagagctgttgaagactcctaacctgggcaagaagtccctgact
gaaatcaaggacgtcctggcctctcgtggtctgtctctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaagacgacaaggcgaccgcctga
DBGET
integrated database retrieval system
