Pseudomonas fortuita: OZ911_05320
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Entry
OZ911_05320 CDS
T10310
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pfou Pseudomonas fortuita
Pathway
pfou03410
Base excision repair
pfou03430
Mismatch repair
pfou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OZ911_05320 (recJ)
03430 Mismatch repair
OZ911_05320 (recJ)
03440 Homologous recombination
OZ911_05320 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfou03400
]
OZ911_05320 (recJ)
DNA repair and recombination proteins [BR:
pfou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OZ911_05320 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OZ911_05320 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OZ911_05320 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WAP64833
LinkDB
All DBs
Position
1169270..1170979
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AA seq
569 aa
AA seq
DB search
MRIEPRPLPPTLPFLGNLPPLLTRLYAARGVQCEAELDKSLARLLPYQQLKGIEAGVDLL
VEALDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQRQPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGQQLPDADAIINPNQPGCTF
PSKALAGVGVIFYVLMALRARLRSLGRYETQAQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCEDAALAQDMAQQLDELNQDRKSIEQGMQREALAQLRDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG
HAMAAGLSLPEGNFPAFAEAFDEEVRRQLREEDLTGRLLSDGSLAVEEFHLDLAKALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgccccctgccgccgacactgccatttctgggtaacttgccaccc
ttgctgacccgtctgtacgccgcgcgcggcgtacagtgcgaggccgagctcgacaaaagc
ctggcgcgcctgctgccgtaccagcaactcaagggcatcgaggccggtgtcgacctgctg
gtcgaggcgctggaccagcgccagcgcattcttatcgttggcgatttcgatgccgatggc
gccacggccagcaccgtcggggtgctgggcctgcggctgctgggtgcggcccacgtcgat
tacctggtgcccaaccgcttcgaatacggctatggcctgaccccggaaatcgtcgaggtg
gcgctgcagcgtcagccgcaactgctgatcaccgtggacaatggtatttccagcgtcgag
ggtgtggcggcagccaaggccgccgggctcaaggtgctggtcactgaccaccacctgcca
ggccagcaactgcccgatgccgacgctatcatcaaccccaaccagcctggctgtacgttc
ccgagcaaggcgctggccggggtaggggtgatcttctatgtgctgatggccctgcgcgcg
cgcctgcgcagcctggggcgctatgagacgcaagcacagccgaacatcggcgagctgctc
gacctggtcgcgttgggcagcgttgccgacgtggtaccgctggatgccaacaaccgcatc
ctggtgcatcagggccttgagcgcatccgcgccggtcgcgcccgcccagggcttaaagca
attctcgaagtggcccgccgcgatcaccggcgtatcacctcgactgaccttggcttcatc
ctcggcccgcggctgaacgccgccggtcgcctggacgacatgagcctgggcatcgagtgc
ctgctgtgcgaagacgcggcgctggcccaggacatggcccagcagcttgacgagttgaac
caggaccgcaagtccatcgagcagggcatgcaacgcgaggccctggcccagctcagggac
ctgccggtggagtccatgccgtatgggttgtgcctgttcgatgccgactggcaccagggc
gtgatcggtattctggcttcgcggctgaaagagcgttaccaccggcctaccatcgccttc
gccgatgccggtgaaggcatgctcaaagggtcggcgcggtcggtaccaggcttccacatc
cgcgatgcactggatgccgtggcggcgcgccacccacaactgatcagcaagttcggcggc
cacgccatggctgcgggcttatcgttgcctgagggtaatttcccggcctttgccgaggcg
tttgacgaagaagtgcgtcgtcagctgcgtgaggaagacctgacaggccggctgttgtca
gatggcagcctggccgtggaggaatttcacctcgacctggccaaggccctgcgccatgcc
gggccttggggccagcattttcctgagccgctgtttcatggcgtgttccagttggtggag
cagcgcgtggtgggcgagcggcacctgaaggtggtgctcaagagcgaatgtggctcggtg
cgactggatggcattgcttttggcgtcgaccgcgaagtgtggccgaacccgaccgtgcgc
tgggtcgaactggcgtacaagctggatgtgaacgagtttcgtggcaacgaaagtgtgcag
ttgatgattgcccacatggagccgcgctga
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