Pseudomonas fortuita: OZ911_08085
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Entry
OZ911_08085 CDS
T10310
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfou Pseudomonas fortuita
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfou03032
]
OZ911_08085 (topA)
03400 DNA repair and recombination proteins [BR:
pfou03400
]
OZ911_08085 (topA)
Enzymes [BR:
pfou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OZ911_08085 (topA)
DNA replication proteins [BR:
pfou03032
]
Prokaryotic type
DNA Topoisomerases
OZ911_08085 (topA)
DNA repair and recombination proteins [BR:
pfou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OZ911_08085 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WAP65344
LinkDB
All DBs
Position
1794258..1796867
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAGEA
PALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV
VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPQEYWEIHADLGTAKNAKV
RFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSVDALDMARSYIEREFGKQYLPDAPLV
YGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT
VAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKPP
ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
SNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSENGMRANQPTMTN
IPCKECGRPMMIRTASTGVFLGCSGYSLSPKERCKATVNLVPGDEIAADDEGESESRVLL
GKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGSYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNPTCKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGAS
GLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPEGRPAVIRYSRKTKE
QYVQSEVDGKPTGWKAFYDGNAWKVEDKR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcaaccagtacgtggtgaagtcgagtatcggccatatccgagacctccccaccagc
ggttcggccagcgcaagcaaagagccggccgccaagcgtggcaaggccgcgggtgaggct
ccggccctgtcgccgaaagaaaaggcccgtcgccagctggtggcacgcatgggcgtcgac
ccggatcacggctggaaggccaagtacgagatcctgcctggcaaggaaaaggtgatcgaa
gagctgcgtcgcctggccaaggatgccgacaccatctatctcgcaaccgacttggaccgc
gaaggggaagccattgcctggcacctgcgcgaagccatcggtggtgacgacacacgctac
aagcgcgtggtgttcaacgaaattaccaaaaaggccatccaggaagccttctcgcagcca
ggcgagctggacatcgaccgggtcaacgctcagcaggcgcggcgcttcctcgaccgtgtg
gttggttacatggtttcgccgctgttgtgggccaagattgctcgcggcctgtctgctggc
cgtgtgcagtcggtcgcggtgaagctggtggtggagcgcgagcgtgaaatccgtgcattc
atcccgcaagagtactgggagattcatgccgacctcggtaccgccaagaacgccaaggtg
cgtttcgaggtggcgcgcgagaagggcgaggccttcaagccgctgaacgaagcccaggcc
atggctgcgctggagaagctcaaggcttccagctacagcgtggtcaagcgtgaagaccgc
ccgaccagcagcaagccgtcggcgccgttcattacctccaccctgcagcaggcggccagt
aaccgcctgggcttcggggtgaaaaagaccatgatgatggcccagcgcttgtatgaggcc
ggctacatcacttacatgcgtaccgactcgaccaacctgtcggtcgatgccctggacatg
gcgcgtagctacatcgagcgcgagttcggcaagcagtacctgccggatgcgccactggtt
tacggcagcaaggaaggggcccaggaggcgcacgaagcgattcgtccttccgatgtgaat
acgcacccgaccaagctcagcggcatggagcgcgacgccgagcgcctgtacgagctgatc
tggcgccagttcctggcctgccagatgcccccggcgcagtacctgtccaccagcgtcacc
gtggctgcgggcgacttcgagctgcgtgccaagggccgtatcctcaaatttgacggttat
acccgcgtgctgccgcaacagagcaagccgggcgaagacgacgtgctgcctgagatggtc
cagggcgaagcgctgaagctgattcagatcgacccgagccagcacttcaccaagccgccg
gcgcgcttcaccgaggccagcctggtcaaggaaatggaaaagcgcggcattggtcgcccg
tcgacctatgcggcgatcatctcgaccattcaggaccgtggttatgtgaccttgcataac
cgccgtttctattccgagaaaatgggcgacatcgtcaccgagcgcctgtcggaaagcttc
tccaacctgatggactacggctttaccgccgatatggaggagaacctcgacgacgtggcc
cagggcgagcgtgactggaaaaacgtactcgacgagttctacggcgacttcagcaagaag
ctgcagactgcagagtccagcgaaaacggcatgcgcgccaaccagccgaccatgaccaac
attccgtgcaaggaatgcggccggccgatgatgatccgcaccgcttccacgggtgttttc
ctgggttgttcgggttacagcctttcgccaaaagagcgctgcaaggccaccgtcaacctg
gtgccgggtgacgagattgccgctgatgacgagggtgaatcggaatcccgcgtgctgctg
ggcaagcaccgttgcccgatctgcgccacagcgatggacgcctacctgctggatgagaag
cacaagctgcacatttgcggtaacaaccccgattgcgttggctacgagatcgaagagggc
agctaccgcatcaagggttacgaagggccgagcctggagtgcgacaagtgtggcagcgag
atgcagttgaagaccggccgttttggcaaattcttcggctgcaccaacccgacgtgcaag
aacacccgcaagctgctcaagagtggagaggcggcgccgccgaagatggacaaggtggac
atgccggagctcaagtgcgaaaaggtggacgacacctacgtgctgcgtgacggtgcttcg
gggttgttcctggctgccagtcagttcccgaaaaaccgtgaaacccgtgcgccgctggtg
cttgaaattgtgccgcacaagcacgagatcgatccgaagtaccacttcctctgcgatgcg
ccacagaaagatccagaaggccgcccggcagttatccgctacagccgcaaaaccaaggag
cagtacgtgcagtccgaggtcgatggcaagccgaccggctggaaggccttctacgacggc
aatgcctggaaggttgaagacaagcgctga
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