Pseudomonas fortuita: OZ911_10980
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Entry
OZ911_10980 CDS
T10310
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pfou Pseudomonas fortuita
Pathway
pfou02025
Biofilm formation - Pseudomonas aeruginosa
pfou03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OZ911_10980 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
OZ911_10980 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfou02044
]
OZ911_10980 (tssM)
Secretion system [BR:
pfou02044
]
Type VI secretion system
Imp/Vas secretion system core components
OZ911_10980 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
DUF998
Motif
Other DBs
NCBI-ProteinID:
WAP65880
LinkDB
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Position
2402160..2405786
Genome browser
AA seq
1208 aa
AA seq
DB search
MNQIWTQLKRWGLPWVTRIGLALPLLLGLGALLMLVAIWWLGPQWMWREQQPLASVAHRS
VASLVLVLVPLLCWLVVVRRRLRRLQAERRQARAVELDGTLPFMQAQEKALSQGLERYLD
NAGGRRALYRLPWYLVLGDEKSGKTSFIDRTDQRFTLTRIDQAQARGRQAEALAYPVGWW
VSDDAVIIDPPGIFISQKPPAGSAANDPSESEPFATLGTEARLWEHLLSWLVRNRSQRAL
NGVLLVVDLPALLNGKPDQRVALAHGLRTRLYEVSTQLGSRLPLYVVLTKFDLLDGFDQF
YGKLPAAKRESLLGFTFKLDAVEAFDAWLDEYDEHYGQLLATLNEQVIDRLDVLGKTAPR
GRLFSLQAQLVGLRPILLAFLREALASDRFTTPPLVRGVYWSSVLQHGDMSNAFVREAAQ
PYKTKLPLREGKAQGKALVYFIQQAFRRVIYQEAGLAGDNVRVARSKRQLLWIGSGVGLL
AFSIAIASWQRYFDINSSKAASVFAKSQEYSRHEVDLRLDPTGRNLLEPLDQIRDAVAVF
GDYRAAWLGVADFGLYQGRNIGPLVDEAYLSLLSRRFLPALASGVIDAMNAAPSGSEQQM
AALRVYRMIEDRDSRRPEWVEDWMARHWQRAFPGQGQLQRDLMQHLKYALAYADTDLPQY
RQRVSEVQQALRKLPLPQRVYAGLKQQAQEQLHSGLDLRHQVGPAFDVVYQPSSGARHGE
EEVLLAAMLTAKGFREYFEPRSQRFAEMAMVDQWALGERSQLDYSDVDRNALTERLHNLY
SADYIDSWRRALNAFTVADFRDLDHGVTVLQQLTGPAAPLQRLLDTVRDNTSLASPAGVE
ITGELNTLRSATRKPEQQQALAIQRAFAGLGAMLQATGEKPSYYDETLGAVAAVLDYAKA
VQDSPDRGKAALQAVHQRFAMTGHDPIGTLQRIATGLPEPINHQVRKLADQTAQVLNVEA
LRELERRWDAEVYSFFQQRLAGRYPFMVKAPDASLDDFEAFFGPKGRLQQFHDQYLEVFL
KENLEALQSAQHGQSLIRADVIEQLELADRIRETFFDQRGKLSVQFSIEPLGLSANQRTS
LLDLDGQLISYTHGPSQITGIVWPNTLGQQVRSNLTLLRQNGNSSSLEYRGPWSMFRLLS
RGSLNGRTPTSVDLSFRTGDGVMRYRLNAEKAFNPITQQPFKSFRLPRGLLQQPPKVVQV
EQAHGQPL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatatggacgcaactcaaacgttggggcttgccgtgggtaacgcgcattggc
ctggcgctgccgctgctgcttgggcttggcgccttgctgatgctggtcgctatctggtgg
cttggcccgcaatggatgtggcgtgagcaacagccgctggcaagtgtggctcatcgcagc
gtggcaagcctggtactcgtgctggtgccgcttttgtgctggcttgtggtggtgcgccgg
cgcttacgccgcctgcaagcagaacgccggcaggcacgcgccgtcgaactggatggcacg
ctaccgttcatgcaggcgcaagagaaggcgttgagccaagggcttgagcgatacctcgac
aatgccggtgggcgacgcgccctgtaccggctgccctggtacctggtgttgggcgatgaa
aaatcgggtaaaaccagcttcatcgaccgcaccgatcagcgctttaccctgacgcgaatc
gaccaggcccaggcacggggtcgacaggctgaagcactggcctacccggtcggttggtgg
gtcagcgacgatgccgtgatcattgatccgcccggtatcttcatcagtcaaaagcccccg
gctggttcggccgccaacgacccctccgagtctgaacccttcgcgacgctcggtaccgag
gcccggttgtgggagcacttgttgagctggcttgtgcgtaatcgaagccagcgggcgctt
aatggtgtgttgctggtcgtcgacttgccggcgctgttgaatggcaagcccgaccaacgc
gtcgcgctggcccatgggttgcgcacacgcctgtacgaagtcagcacccagctggggtcg
cgcctgccactgtacgtggtactgaccaaattcgatctgctggacggcttcgatcagttc
tacggcaagcttcccgccgccaagcgtgaaagcctgttgggattcacgttcaagctggat
gcagttgaggcgttcgatgcctggctggatgagtatgacgagcactacggacagcttctc
gccacattgaacgagcaggtgatcgatcgcctggacgtactgggcaaaacagcgccgcgc
gggcgcctgttctcactgcaagcccaactggtcgggttgcgacccatactgctggcattt
ctgcgcgaagccttggcaagtgaccgtttcaccacgccaccgttggtacgtggtgtgtat
tggtcgtcagtgctgcagcacggcgacatgagcaatgcatttgtccgtgaagcggcacag
ccctacaagacgaaacttcccctgcgtgagggcaaggcacagggcaaggcgttggtctat
ttcatccagcaagcattcaggcgggttatctatcaggaggccggcctggcgggcgacaac
gtccgggtagcgcgcagcaagcgccaattgctgtggattggttctggcgtaggcctcctg
gcgttcagtatcgccatcgccagctggcagcgctacttcgatatcaatagctccaaggct
gccagtgtgttcgccaaaagccaggagtacagccgtcacgaagtcgatctgcggcttgat
ccgaccgggcgcaacctgctggagccactggaccagattcgcgatgcggtggcggtgttt
ggcgactatcgcgcggcgtggctgggtgttgccgattttggtctgtatcaagggcgcaac
attggccccctggttgatgaggcgtacctgagcttgttgtccaggcgtttcttgccggcg
ttggccagtggtgtgatcgatgccatgaacgcagcaccttctggcagcgagcagcaaatg
gccgcgctcagggtttaccggatgatcgaggaccgcgacagccgccggcccgaatgggtc
gaggactggatggcccgtcattggcaacgggcatttcctgggcaagggcaactgcagcgt
gacctcatgcagcatttgaagtacgccttggcctatgcagacacggatttgccgcagtac
cgccagcgtgtcagcgaagtgcagcaggcattgcgcaaattgccgttgccacagcgggtc
tatgcagggctgaagcaacaggcgcaagagcagttgcacagcggtctggacctgcgccac
caggtagggcctgcgttcgatgtggtgtaccagccgtcttccggggccaggcatggggag
gaggaggtactgctggccgccatgcttaccgccaaaggcttcagggaatacttcgagccg
cgcagccagcggttcgctgaaatggcgatggtcgatcagtgggccttgggcgagcgcagc
caactcgactattcggacgtcgaccgcaatgcgttgaccgaacggctgcataacctctac
agcgccgattacattgacagctggcgacgcgccttgaatgcattcaccgtcgccgacttc
cgtgatctggaccatggtgtcacggtcctgcagcagttgaccggcccagcagcacctttg
cagcggctgctggatacggtgagggataacacctcactcgcttccccggctggtgttgaa
ataacgggtgaactgaatacgctgcgctcagcaacgcgcaaacccgagcaacagcaagcc
ttggccatccagcgggcgtttgcaggcttgggcgcgatgctgcaggccacaggagaaaag
ccgagctactacgatgaaaccctcggcgctgttgcggccgtgctggactacgccaaggcc
gtacaggacagcccggaccgcggcaaggccgcactgcaagctgtgcatcagcgctttgcg
atgaccgggcatgacccgataggcacccttcaacgtattgccacaggcttgccggagccc
atcaaccatcaggtcagaaagctcgccgaccagaccgcccaggtgctgaacgttgaagca
ctgcgcgaactggagcggcgttgggatgctgaagtttacagtttcttccagcaacgtctg
gcaggccgctacccctttatggtgaaggcacccgatgcttcactcgatgacttcgaggcg
ttcttcgggccgaaagggaggctgcagcagtttcatgatcaatacctggaggtcttcctg
aaggagaaccttgaggccttgcaatccgctcagcacgggcaatccttgattcgcgccgac
gtgatcgagcaactcgagctggcggatcgcatccgcgaaaccttctttgaccagcgcggc
aagttgagtgtgcagttcagcatcgagccgttggggctcagcgctaaccagcgcaccagt
ctgctggacctcgatggtcagctgatttcctacacccatgggccgagccagatcaccggg
atcgtctggcccaatactttggggcagcaggtgcgcagcaaccttaccttgctgaggcag
aacggtaacagcagcagcctggagtaccgcgggccgtggtcgatgttccgcttgctcagc
cgcggctcactcaatgggcggacgccaaccagcgtagacctgagcttccggaccggtgat
ggcgtgatgcgctatcgactgaatgctgaaaaagccttcaatcccatcacccagcaaccg
ttcaaaagcttccggttgccgcgagggttgttgcaacagccgcccaaggtggttcaggta
gagcaggcgcatgggcagcctttatga
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