Pseudomonas fortuita: OZ911_21350
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Entry
OZ911_21350 CDS
T10310
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfou Pseudomonas fortuita
Pathway
pfou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OZ911_21350 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfou03019
]
OZ911_21350 (recQ)
03400 DNA repair and recombination proteins [BR:
pfou03400
]
OZ911_21350 (recQ)
Enzymes [BR:
pfou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OZ911_21350 (recQ)
Messenger RNA biogenesis [BR:
pfou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OZ911_21350 (recQ)
DNA repair and recombination proteins [BR:
pfou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OZ911_21350 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Sigma70_r4_2
HTH_40
HTH_23
ResIII
GerE
HTH_29
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
WAP62436
LinkDB
All DBs
Position
complement(4670838..4672985)
Genome browser
AA seq
715 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQ
PRMLDFLRDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLGERRGNAGIVYCLSRKK
VDETAAFLCDQGFPALPYHAGLAAETRSANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRIEQHK
LDAMLALCEETRCRRQSLLAYFDEILEQPCGHCDNCVDNIQTWDATEPARQALSAVFRTG
QRYGVGHLVDVLLGKDNEKVRNFGHEKLSVFGVGKGLAEVEWRSLFRQLVARGLVDIDLE
GYGGLRLSDSCRPLLRGEVTLQLRRDLKPQTTAKTSSSSGGSPASQLVRAEERELWEALR
TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPVSLSDMAQVSGVGARKLERYGQAFLEVLN
NSGGTEEAPKVVLDLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEALGRQELSLDQ
ALDLPEDLLMEVQDAFLDGEGELPPVSAIAPQFGARVPEGVLYCVRAALAAEFEM
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgttctcaaggacatcttcggctacgacagtttccgtggg
cgccaggcagcaatcatcgaatgcgtggccaatggcggcgatgccctggtgctgatgccc
actggtggcggcaagtcgctgtgtttccaggtgccggggctgctgcgcccgggcctgacg
gtggtggtctcaccgctgattgcgttgatggacgaccaggtcgccacgctggacgaactg
ggcgtgtcggctgccgcgctgaactctaccctgacggcggagcagcagcgtgaactggcc
gggcgcctgcgccgtggcgaagtgaagatgctgtacctggcgccggagcgcctggtgcag
ccgcgcatgctcgatttcctgcgcgatctggacatctcgctgtttgccatcgacgaggcg
cactgcgtgtcgcagtggggccacgatttccgccccgaatacctgcaactggggcaattg
gccgagctgttcccgcatgtgccgcgcattgcgctgaccgccaccgccgatatgcgcacc
cgcgaagagattgtccagcgcctgcacctgcaaggcgccgagcgcttcctgtcgagcttt
gaccggccgaacatcttctatcgcatcgtacccaaggaagcgccgcgcaagcagctgatg
gccttccttggcgagcgccgcggcaacgcgggcattgtgtactgcctgtcgcgcaagaag
gtcgacgaaacggcagccttcctctgtgatcagggtttcccggcattgccttatcatgcc
ggcctggctgccgagacccgttctgccaaccagcaccgcttccttaatgaggaagggttg
atcatggtcgccaccattgccttcggcatgggtatcgacaaacccaacgtgcgcttcgtt
gcccacctcgacctgcccaagtcgcttgaggcctattaccaggaaaccggccgtgccggc
cgggacggcttgccatccgatgcctggatggcctacggcctgcaggacatggtcatgctc
aagcagatgctgcagaactccgaaggagacgagcgccacaagcgcatcgagcagcacaag
ctcgacgccatgctggcgttgtgcgaagagacccgctgccgccgccagtcgttgctggcc
tatttcgatgaaatcctcgagcagccgtgcgggcactgcgacaactgtgtcgacaacatt
cagacctgggacgccaccgagccggcccgtcaggcgctgtcggcggttttccgcactggc
cagcgctatggtgtcggccacctggtcgatgtgctgttgggcaaggacaacgagaaggtg
cgcaatttcggccacgagaagctgtcggtgttcggcgtcggcaagggcctggccgaggtc
gagtggcgttcgttgttccgccagctggtggcgcgtgggctggtcgacatcgacctggag
ggctatggcggcctgcgcctgtccgacagctgccggccactgctgcgcggcgaggtgacc
ttgcaactgcgtcgcgacctcaagccgcagaccacggccaagacctcatcgtccagcggt
ggcagcccggccagccagttggtgcgtgccgaggagcgcgagctgtgggaagcgctgcgt
accctgcggcgcaagctggcggaggagcacagtgtgccgccctatgtcatcttccccgac
tcgacgctgctggaaatgctgcgcagccagccggtcagcctcagcgatatggcccaggtc
agcggtgtgggggcgcgcaagctggagcgttatggccaggcgttcctcgaggtactgaac
aacagcggtggcaccgaagaggcgccgaaagtggtactcgacctgcgccacgaactggtc
agcctggcccgggccggcatgaccccggcgcagatcgccgggcagctcaactgcagcgag
aagaacgtgtatagcctgctggccgaggcgttgggccgccaggagcttagccttgaccag
gccctcgacctgccggaagacctgctgatggaagtacaggacgccttcctggatggcgag
ggcgaactgccgccggtgtcggccattgcgccccagttcggggcacgggtgccggagggt
gtgctgtattgcgtgcgtgcggcgctggcggccgagttcgagatgtga
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