Pseudomonas fortuita: OZ911_22460
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Entry
OZ911_22460 CDS
T10310
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pfou Pseudomonas fortuita
Brite
Transcription machinery [BR:
pfou03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OZ911_22460 (rapA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WAP62634
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Position
4899083..4901929
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVDDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSAEYGLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPVAEAVQELLDE
GRLSPEAHATIQGFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLATPEQYRDLPAGEHAELYPEVAFQAQGDVADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQGSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLPLLEGGESKAWDTLVADARSERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRAQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLAARVAF
ETLNEQLESVPRASANKFVQAQRDVLAKRISGGEEKIMPTHVERVAEAQRRLAAEADEEL
ARLVALQAVNPSVRDSEIDALRKQREEGPAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagcagagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacgcgccagtattccctgcgcaacgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccacttcgagggctggaagctgaccgtgcgcgaggtcgatgacatcgac
gggctgatggtctaccacggtctggacgggcaaaaccagccgcgtaccctgccagaaacc
cagctgtcgaacttcattcagttccgcctggccagcgaccggctgttcgccggccagatc
gacccactgtcgtggttcagcctgcgctacaacaccctgcagcacaccagcaagcagatg
cagtcagcgctgtggggcctgggcggctgccgcgcgcaaccgatcgcccaccagttgcac
attgctcgcgaagtcgccgaccgcagcgccccgcgggtattgctggccgacgaagtgggc
ctgggtaaaaccatcgaagccggcctggtgattcatcgccagttgctgtcaggccgcgcc
agccgcgtgctgatcctggtgccggaaaacttgcagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtagccctgttcgatgccgagcgctttatcgaaagcgacgcc
agcaacccgttcgaggatgcccagcttgcgctggttgcactggaatggctggtcgacgac
gaaaaggcccaggacgcactgtttgctgctggctgggacctgatggtagtcgacgaggcc
caccacctggtctggcacgaagatcaggtcagtgccgaatacggcctggtcgagcaactg
gcccaggtgatcccgggcgtgctgctgctcaccgccacccccgagcaacttggccaggac
agtcacttcgcgcgcctgcgcctgctcgaccctaaccgtttccacgacctggcggccttc
cgcgccgagagcgagaattaccgcccagtggctgaagccgtgcaggaactgctcgacgaa
ggccgcctgtcgcccgaggcccacgccaccatccagggcttcctgggtgccgaaggcgaa
gccctgctggcggcggtcagcgacggcgacagccaggccagcgcacgcctgatccgcgaa
ctgctggaccgccacggcaccggtcgcgtcctgttccgtaacacccgtgcggcgatccag
ggcttccctgagcgccagctgcacccttacccgctggccacacctgagcaataccgcgac
ctgcctgctggcgagcacgccgagctgtacccggaagttgccttccaggcccagggcgat
gtggctgacgacgagcgctggtggcgtttcgacccacgcgtcgactggctgatcgacacg
ctgaagatgctcaagcgcaccaaggtattggtgatctgcgctcacgccgaaaccgccatg
gaccttgaagacgccctgcgcgtgcgctccggcattccggcgtcggtgttccatgaaggc
atgaacatcctcgaacgcgatcgcgccgccgcctacttcgccgacgaagagttcggtgcg
caagtgcttatctgctcggagatcggcagcgaaggccgcaacttccagttcgcccaccac
ttggtgatgttcgacctgcccgcgcacccagacctgctcgaacagcgcatcggccgcctt
gaccggatcggccagaagcacaccatccagctgcacatcccgtacctgcaaggcagcccg
caagagcgcctgttccagtggtaccacgagggccttaacgccttcctcaacacctgcccc
accggcaacgcccttcagcaccagttcggcccgcgcctgctgccgttgcttgaaggtggc
gagagcaaggcctgggataccctggtggctgacgcccgcagtgagcgcgagcgcctggaa
gccgaactgcacactggccgcgaccgcctgctggagctcaactccggcggtgccggcgaa
ggccaggcgctggtcgaggccattctcgagcaggacgaccagtttgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattccgagaacgcactg
atcctcaagccgagcgaaaagatgctcgatgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtgcccaggcgctgtcgcgtgaggacatgcagttcctcacc
tgggagcacccgatggtgcagggcggcatggacctggtgctgtccggttcgatgggcaac
accgccgtggcactgatcaagaacaaggcactcaagccgggcactgtactgctcgaattg
ctgttcgtcagcgaggtggtggcaccgcgcagcctgcaactgggccgctacctgccgccg
gcggcactgcgctgcctgctcgacgccaacggcaacgacctggccgcccgcgtggccttc
gaaaccctcaacgagcagctcgaaagcgtaccgcgcgccagcgccaacaagtttgtccag
gcccagcgtgacgtgctggccaagcgcatcagtggcggtgaagagaagatcatgcccact
cacgtcgagcgcgtagccgaagcccagcgccgcctggcggctgaggccgacgaagagctg
gctcgcctggtggcactgcaagcggtcaacccaagcgtgcgcgacagcgagatcgacgcg
ctgcgcaagcagcgcgaagagggtccggcgatgctggacaaggctgccttgcgcctggaa
gccattcgcgtactggtagcgggctga
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