Pseudomonas fortuita: OZ911_24550
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Entry
OZ911_24550 CDS
T10310
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pfou Pseudomonas fortuita
Pathway
pfou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OZ911_24550 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfou03400
]
OZ911_24550 (recD)
Enzymes [BR:
pfou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OZ911_24550 (recD)
DNA repair and recombination proteins [BR:
pfou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OZ911_24550 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
NAT10_TcmA_helicase
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
AAA_28
T2SSE
TraI_hel_assoc_N
PhoH
nSTAND3
NTPase_1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WAP63027
LinkDB
All DBs
Position
complement(5351278..5353365)
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AA seq
695 aa
AA seq
DB search
MSRAKSRNLVDLLPTPLHAEHLLALAPQHDSGDLLQLLDRWVERGWLRALDRAFVSFLEE
RAPGSDPLLLLAAALASHQLGHGHVCLDLQQTLAEPDFALSLPPEGDALTGPLLLPSQLL
ANLDLKDWRQRIAASALVAAGDTPGQQARPLVLSGERLYLRRYWRYERRIDQILRQRLTQ
AEAPLADLSGRLSQLFEGGAPAGQVDWQKLACALATRAGFSIITGGPGTGKTTTVVRLLA
LLQGPAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVSAEVRDQIPTEVSTVHRLL
GSRPGSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLYALPPRARLVLLGDKDQLASV
EAGAVLGDLCRDAEGGHYSSATSAWLEQISGESLAASGLKAGDEQRNPLAQQLVMLRFSR
RFGEGSGIGQLARLVNCQDSHAARNLLATPPADVHSLALKHEQDRAFDRLLLDGLNRGAE
GPQGYRSYLRTLGRYRPALETAFDDPAWEQWAGKVLHSFEDFQLLCAVRRGAWGVEGLNE
RVARVLHAAGLIDSQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDERGEPLLRVAFP
RNDGSGGVRFVLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGIT
RAKHCFSLVEPRQGIFEEAVARKVRRISGLMLEQV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgccaagagccgaaacctggtcgacctgttgcccaccccgttgcacgccgaa
cacctgctggcgctggcgccacagcatgacagcggtgacctgctgcaactgctcgaccgc
tgggtagagcggggctggctgcgtgccctggaccgcgcgttcgtctcgttcctcgaagag
cgcgcccccggtagcgaccccttgctattgctggcggcggcgctggccagccaccaactg
ggccacgggcatgtctgcctggacctgcaacaaaccctggccgagcccgattttgcattg
tcactgccgccggaaggcgacgccttgacaggccccttgctgctgccctcgcagttgctg
gccaacctcgatttgaaggactggcgccaacgcatcgccgccagcgcgctggtggctgcc
ggcgataccccggggcagcaggcgcggccactggtgctcagcggtgagcgcctgtacctg
cgccgctactggcgctacgagcggcgcatcgaccagatcctgcgccagcgcctgacccag
gccgaggcgccgctggccgatctgtcaggtcgcctgtcgcaactgttcgaagggggagcg
ccagctggccaggtggactggcagaagcttgcctgtgcgctggcaacccgtgccggtttc
agcatcatcaccggtggccccggcacaggcaaaaccactaccgtggtgcgcctgctggcc
ttgctgcaggggccggcagtggagcagggcaggccgctgcgcatccgcttggccgcgccg
accggcaaggctgctgcgcgcctgacggagtcgattggccagcaagtcgagcgcttgcag
gtcagcgccgaagtacgtgatcagatccccactgaagtcagcactgtgcaccgtctgctc
ggcagccgccccggctcgcggcactttcgccaccatgcaggcaacccgttgccgctggac
gtgctggtggtcgatgaagcgtcgatgatcgacctggaaatgatggctaacctgctctac
gccctgccaccccgcgcgcgcctggtgctgctgggcgacaaggaccagctggcttcggtc
gaggccggtgcggtgctgggcgacctgtgccgggatgccgaggggggccactattcgtcg
gcgacctctgcgtggctggaacagatcagcggtgagtcgctggccgccagcggcctgaag
gccggtgatgagcagcgcaacccgctggcccagcaattggtgatgctgcgcttctcacgg
cgcttcggggaaggcagcggtattggtcaactggcgcggctggtcaactgccaggactcc
catgcggcgcgcaacctgctggccacgccgccggccgatgtgcacagccttgccctcaag
cacgagcaggaccgggctttcgaccgcctgctactcgacggcctgaaccgcggtgccgaa
ggcccgcaaggctatcgcagctacctgcgcacacttggccgctaccggcctgcactcgaa
actgcatttgacgaccccgcgtgggagcaatgggcgggcaaggtgctgcacagcttcgag
gacttccagttgctgtgcgcggtgcgtcgtggcgcctggggtgtcgaaggcctcaacgaa
cgggtggcgcgggtgctgcacgctgccgggctgatcgatagccagcagccctggtacgaa
ggccgtccggtgctggtgacccgcaacgactacgggctggggctgatgaacggcgacatc
ggtattgccctgcgcctgccggacgagcgtggtgagccgctgctgcgggtggccttcccg
cgtaacgacggcagtggtggtgtgcgtttcgtgctgccgagccggctcaatgaagtggaa
acggtattcgccatgaccgtgcacaagtcccagggctcggagttcagccacaccgccctg
gtgctgccggatgcgctcaacccggtgctgaccaaggaactggtgtacaccggcatcacc
cgggccaagcactgcttcagcctggtcgagccacgccagggcattttcgaagaagcggtg
gcgcgcaaggtgcggcgtatttccgggttgatgctcgaacaggtgtaa
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