Pseudomonas fortuita: OZ911_24770
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Entry
OZ911_24770 CDS
T10310
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfou Pseudomonas fortuita
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfou03016
]
OZ911_24770 (truB)
Enzymes [BR:
pfou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OZ911_24770 (truB)
Transfer RNA biogenesis [BR:
pfou03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OZ911_24770 (truB)
Prokaryotic type
OZ911_24770 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
WAP63065
LinkDB
All DBs
Position
complement(5408516..5409433)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTREVTVGRADIEAVLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEALEQAHAEGGNEALDRFLMPSDS
GLQDWPMVCLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaatgtcagcggcatcatcctgctcgacaagcct
ttgggctttacgtccaacgccgccctgcaaaaggtgcgctggctgctcaacgcggaaaag
gccggccatactggcagcctcgacccgctggcaaccggcgtgctgccactgtgctttggc
gaggcgaccaagttttcgcagtacctgctcgattccgacaagggctacgaaaccgtcatg
cagatggggcagactaccaacaccggcgatgccgaaggtgaggtgctgcagacccgcgag
gtgaccgttggtcgtgccgacatcgaggcagtactgccacgatttcgtggccctatcagc
cagataccgccgatgtactcggcgctcaagcgtgacggccagccactttacaagctggcg
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctggagtgtgaaggcacccgtgcacggctgagcgtaggatgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggcgaggcccttggttgcggcgcctatgtcgccgaactg
cgcaggacccaggccgggccctttgcgctggcacagaccgtcacgctcgaagcgctcgaa
caggcccatgccgaaggtggcaacgaagcgctcgatcgcttcctgatgccctcggacagc
ggtctgcaggactggcccatggtgtgcctgtccgagcacagtgcgttctactggctgcat
gggcaggcagtacgcgcgccggacgcgccacagtttggcatggtccgggtacaggatcac
aatgcgcgcttcatcggtatcggtgaagtgagcgaagacgggcgtattgcgccgcgtcgg
ctgattcggtcggaatga
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