Pseudomonas fortuita: OZ911_25100
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Entry
OZ911_25100 CDS
T10310
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pfou Pseudomonas fortuita
Pathway
pfou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OZ911_25100 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfou03400
]
OZ911_25100 (recD)
Enzymes [BR:
pfou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OZ911_25100 (recD)
DNA repair and recombination proteins [BR:
pfou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OZ911_25100 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_28
PhoH
TraI_hel_assoc_N
AAA_16
Mg_chelatase
UvrD_C
AAA_17
T2SSE
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WAP63123
LinkDB
All DBs
Position
complement(5484996..5487089)
Genome browser
AA seq
697 aa
AA seq
DB search
MSQTLKQLSNSQRTVDHAPVFIGEASNTALLQQLDNWVGRGWLRALDRSFATFILEQDPQ
AQASVLLAAAMTSHQLGRGHSCLDLAATLNAPDFVLSLPPEGEEGNQLPSQWLLGLGVEH
WRRALSASPLVEDRDGQQRSPERPLVLVGQRLYLRRYWNYERSIAQALSARLSVATVTPE
KLASRLDALFPDAFEINGERCSDWQKIACALAARGNFSVITGGPGTGKTTSVVRLLGLLQ
TPAVEEGKPLRIRLAAPTGKAAARLSESIGKAVSVLPVSATVREAIPTDVSTLHRLLGSR
PDSRNFIHQRDKPLELDVLVVDEASMIDLEMMACLLDALPRQARLILLGDKDQLASVDAG
SVLGDLCREAEKGGYSEQTTAWLNTHSGETLGAPGLQLAAGLGDPLAQQTVMLRYSRRFD
PQQGIGRLAKLVNEKDAVQARSLLEQPSAQLCNLKLRGEHDAALTDVIINGKGDAPGYRH
YLEQLRGLRPASDTPWDSGLWASWAGSVLSAFDEFRLLCALRRGPWGVEGLNQRVAAELH
RCELLAGEQGWYEGRPVLVTRNDYSLNLMNGDIGIALWVSGPNAERVLRVAFPRNDGSGG
VRFVMPSRLVEVETVFAMTVHKSQGSEFNHTALVLPDALNPVLTKELLYTAITRAKQWFS
LIEASPGVFEGAVSRNVQRTSGLALQLQDELATVQRT
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacccttaagcaactcagcaacagccaacgcacggtcgatcatgcaccggta
ttcattggtgaggccagcaacacggcgctgctgcagcaactggacaactgggtgggccgc
ggctggttgcgtgcgttggatcgctcgttcgccaccttcatccttgagcaggaccctcag
gcccaggccagtgtgttgttggccgccgcgatgaccagccaccaacttggccgcgggcat
tcctgcctggacctggcggcaacgctgaatgccccagacttcgtgttgtcgttgccacct
gaaggcgaggagggcaaccagctaccgtcgcaatggttgctcggcctgggtgtcgaacac
tggcgccgggcgttgtccgcgagcccgttggttgaggaccgggacgggcagcagcgcagc
cctgagcgcccgttggtattggtagggcagcgcctgtacttgcgtcgctactggaactac
gagcgcagcattgcccaggccttgagcgcacgcttgagtgttgccacggttacgccggaa
aaactcgcaagccggctcgatgccttgttcccagatgcttttgagatcaacggcgaacgc
tgcagcgactggcaaaagattgcgtgcgcactggctgcgcgaggcaatttcagtgtcatc
accggcggccctggtacgggcaagaccacctcggtggtgcgcctgttggggttgctgcaa
accccagcggtggaagaaggcaaaccgctgcgcatccgcctcgccgcccccaccggcaag
gcggctgcgcgcttgtccgagtccatcggcaaggctgtcagtgtattgcctgtcagcgcc
acggtgcgcgaggcgataccgacagatgtttcaaccttgcaccgcttgctcggcagccga
ccggattcgcgtaacttcattcaccagcgtgacaagccgttggaattggatgtgctggtg
gtcgacgaggcgtcgatgatcgacctggaaatgatggcctgtctgctggatgccttgccc
cgtcaggcgcgcttgatcctgctgggtgacaaggaccagctggcgtcggtggatgccggt
tcggtgttgggcgacctgtgtcgtgaggctgaaaagggcggctacagcgagcagacgacg
gcctggttgaacacccacagtggcgagacgcttggtgcgccaggtttgcaactggcagcc
ggcctgggcgacccactggcgcagcagaccgtcatgctgcgttactcgcggcgcttcgac
ccccagcaagggatcgggcgcctggcgaagttggtcaatgaaaaagatgccgttcaagcc
cgcagcttgctggagcagccctccgcgcagctgtgcaacctcaagctgcgtggcgagcat
gatgccgcgctcactgacgtgatcatcaatggcaaaggcgatgccccgggttaccgtcat
taccttgagcagctacggggcctgcgccctgcgagtgatacgccctgggacagtggcctg
tgggccagctgggctggcagcgtattgtccgcgttcgatgagttccgcctgctctgtgcg
ctgcgccgggggccttggggggttgaggggctgaaccagcgggttgccgcagaactgcac
cgctgcgaactgctggcaggcgagcaggggtggtacgaagggcgaccggtgctggtcacc
cgcaacgactacagcctgaacttgatgaacggtgacattggcatcgccctctgggtgtca
gggcccaacgctgagcgggtgttgcgcgtagccttcccgcgcaatgatggcagcggcggc
gtacgcttcgtgatgccaagccggctggtggaggtcgagacggtgtttgccatgacggtg
cacaagtcccagggttcggagttcaaccacacggccttggtgttgcccgatgcgctgaac
ccggtattgaccaaggagctgctgtacaccgccatcacccgggccaagcaatggtttagc
ttgatagaggccagcccaggggtgttcgagggggcggtgagccgcaatgtgcagcgtacc
agcgggctggcgctgcaactgcaagacgaactggcgaccgttcaacgcacctga
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