Pseudomonas fortuita: OZ911_28525
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Entry
OZ911_28525 CDS
T10310
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfou Pseudomonas fortuita
Pathway
pfou03420
Nucleotide excision repair
pfou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OZ911_28525 (uvrD)
03430 Mismatch repair
OZ911_28525 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfou03400
]
OZ911_28525 (uvrD)
Enzymes [BR:
pfou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OZ911_28525 (uvrD)
DNA repair and recombination proteins [BR:
pfou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OZ911_28525 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OZ911_28525 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
Viral_helicase1
DUF5681
Motif
Other DBs
NCBI-ProteinID:
WAP63767
LinkDB
All DBs
Position
6242836..6245022
Genome browser
AA seq
728 aa
AA seq
DB search
MHTDDLSLLLNSLNDAQRQAVAAKLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSI
LSVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSD
DQQRLIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAY
EQACERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFQHVLVDEFQDTNAVQYAWLRLLA
RGGASLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALI
VNNSGRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRG
IGEKTVEAIREHARHSQVSMWEAMCQLLAAKALKGRAASALGAFIELIEGLATKVTDMPL
HTMTQTTIEQSGLITYHQEEKGEKGQARVENLEELVSAARNFESTDEDADLSPLSAFLGH
ASLEAGDTQADEHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLIQEVRLSNSVSRPFSGA
KTATNSNLFANANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLML
GYAKLEAI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagatgacctctccctcctgctgaactccctcaacgatgctcaacgccaggcc
gtcgcggccaagctcgggcgtcaactggtgcttgctggcgccggctccggtaaaacccgc
gtgctggtgcatcgcatcgcctggctgatccaggtggaacaagcatcgccgcactcaatc
ctgtcggtgacgttcaccaacaaggctgcggcagaaatgcgccatcggatcgagcaactg
ctggggatcaacccggcaggcatgtgggtcggtaccttccacgggctggcccatcgcctg
ctgcgggcccactggcaggaagcacggctggtgcagaacttccagatcctcgacagcgat
gaccagcagcgcctgatcaagcgggtcatgcgcgaactggggctggacgagcagaagtgg
ccggcacgccaggcccagtggttcatcaacgggcagaaggatgaaggcctgcgcccgcag
catatacaggcggggggcgacctgttcctggcgaccatgcgcgaggtgtataccgcctac
gaacaggcctgtgagcgcgcgggggtcatcgacttctccgaactattgctgcgtgcactg
gacctgtggcgcgaccacccgggcctgcttgagcactaccagcggcgcttccagcatgta
ctggtagacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctggcg
cgcggtggtgccagcctgatggcggtgggcgacgacgaccagtcgatctacggctggcgc
ggcgccaaaatcgagaacattcaccagtacaccgccgacttccccgacgccgaaatgatc
cgcctggagcagaactaccgctccaccggcggcatcctcaaggctgccaacgccctgatc
gtcaacaacagcgggcgcctgggcaaggaactgtggactgacatgggtgaaggcgaaccg
ctgacgctgtacgcggcctacaacgagcacgacgaagcgcgctacgtggtggaaaccatc
gaaagcctggtcaagcagggcaatgcgcgtaacgaaatcgccattctctaccgttccaac
gcccaatcgcgggtgctggaagaggccctgctgcgcgagcgtatcccgtaccgtatctat
ggtggccagcgcttcttcgagcgcgccgaaatcaagaacgccatggcttacctgcggctg
atcgaagggcgtggcaacgatgcggccctggagcgggtgatcaacgtgccgccacgcggc
attggcgagaaaaccgtcgaagccatccgcgagcatgcccgccacagccaggtgtcgatg
tgggaagccatgtgccagctgctggctgccaaggcgctgaaaggccgcgccgccagcgct
ctgggtgccttcatcgagctgatcgaggggttggccacgaaggtcacggacatgccgctg
cataccatgacccagaccaccatcgaacagtccgggctgatcacctatcaccaggaagaa
aagggtgaaaagggccaggcacgggtagaaaacctcgaggaactggtcagcgcggcgcgc
aacttcgagtccaccgacgaagacgccgatctctcgccgctttcggccttcctcggccat
gcctcgctggaagccggcgatacccaggccgatgagcatgaagacagcgtccagctgatg
accttgcacagcgccaaaggcctggagttcccgtatgtgttcctggtgggcatggaagaa
ggcctgttcccgcacaagatgagcctggaagaacccggccgtctggaagaggagcgccgc
ctggcctatgtgggaattacacgggctatgcgccagctggtcatgacctacgccgaaaca
cgtcgcctgtatggcagcgaaacctacaataaggtgtcgcgtttcgtacgtgaaattccc
gcaggccttattcaggaggtgcgtctgtccaacagcgtcagtcgcccgttcagtggggcc
aagacggccaccaacagtaacctgtttgccaatgccaatattccacagacggcgttcaac
ctcggccagcgcgtgcaacatgcggtgtttggcgaaggcgtgatcctcaacttcgagggt
tcgggcgcccaggcacgggtacaagtgaattttgccgaaggcagcaagtggctgatgctg
gggtatgcgaagctcgaagccatctga
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