Pseudozyma flocculosa: PFL1_00045
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Entry
PFL1_00045 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_00045
Enzymes [BR:
pfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PFL1_00045
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PFL1_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
19314179
NCBI-ProteinID:
XP_007875733
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MRIVVWNINGLRTLRGYQPWYQLKDWQSCLEHLDADIACFQETKMTRKQLQEWMCILPSY
HAFFNFHPTKGYSGTVTYVKKDICIPLKAEQGITGRLVNTDNPAEAIGAYPRDVRDDVEP
ALWNALDAEGRAVVLDCGLFVLFNLYAPNETGPERLEYKMSYYHCLEERANRLIQEGRQV
MIVGDMNIIRDRIDHCDPEQSLREHGWTHFKQHPARTWYDAFLAPKGKFHDVGRLYHPTR
AKMFTNWNTLIDARPANYGVRLDYTLVTEGLLPWIKGADIQPDIYGSDHCPIYLDMHDSR
EIDGRTVYLKDLMHGGSSRPPPPLAACFYDEFSGKQRKLASFFSAAKKPPPTPPLPAATD
KADGMAKEVGASEASPQAEPRPGAPENGEISLADALFALQAPATSEGPTSAMIPEEAAGV
GRETTAAADPPKGVAPSPSPLATSAQQKARLSVSASPPKRSPAASQRPSSSSTSSSSSLR
KTSSKVPPKGQMRLQAFFTKPSAPPPSAPPALAADAETSTTVTTAPEAEEQPSQTSVSTT
GPDAVHQGRSRSSSPELIESFEEADPSSPQKHARTASSTSSNGSASTLATSAAAEPSAAE
RVEASMAWGAIFAPLPPPTCRVHGETAKAWRVNKPGPNHGRKFWLCSRPVGPGYEKSGRA
KGDVNPEYRCNFFQWDSEWKGEASKRRRREEHEACEAAAGVSFAEVGKQKRATAGGGGRG
GAEMIIGSDDGAPHKRVKSSK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgtcgtgtggaacatcaatggcctgcgcaccctccgcggataccagccctgg
taccagctcaaagactggcagtcctgcctcgagcacctcgacgccgacatcgcctgcttc
caggagacaaaaatgacgcgcaagcagctccaggagtggatgtgcatcctcccctcctac
cacgccttcttcaacttccacccaacaaagggctacagcggcaccgtcacctacgtcaaa
aaggacatctgcatcccgctcaaggcagagcagggtatcacaggcaggctcgtcaacacc
gacaacccggccgaggccatcggcgcctacccgcgcgacgtccgcgacgacgtcgagccc
gctctctggaacgccctcgacgcagagggaagggccgtcgtactcgactgcggcctattt
gtcctcttcaatctctacgcaccaaacgagaccggaccggagcgcctcgagtacaagatg
agctactaccactgcctcgaggagagggccaaccgcctcatccaggaaggcaggcaggtc
atgatcgttggagacatgaacatcatccgcgaccgcatcgaccactgcgacccggagcag
tcgctcagggagcacggatggacccacttcaagcagcaccccgcaaggacgtggtacgac
gccttcctcgcgccaaagggcaagtttcacgacgtcggtcgcctctaccacccgacccgc
gcaaagatgtttaccaactggaacaccctgatcgacgcccgccccgcaaactacggcgtt
cgtctcgactacacgctcgtcaccgaggggctgctgccttggatcaagggggccgacatc
cagcccgacatctacggctccgaccactgccccatctacctcgacatgcacgactccagg
gagatcgacggcaggaccgtctacctcaaggacctgatgcacggcgggtcgagccggccg
ccgcccccgctggctgcgtgcttctacgacgagttctcgggcaagcagaggaagctggcg
tcatttttctcggcggccaagaagccgccaccaaccccaccgctgcctgctgccactgac
aaggcggacggcatggctaaagaggtgggggccagcgaagcgagcccgcaggctgagcca
aggccgggagcaccggagaacggagagatttcgctggcagatgctctgtttgcgcttcaa
gcgcctgcaaccagcgaagggccgacgtcggcgatgatccccgaagaggcggcaggagtc
ggaagggaaacgacggccgccgcagatccaccaaaaggcgtggcaccatcgcccagcccg
ctcgcgaccagtgcgcagcaaaaggcgaggctcagcgtcagcgcttcgccacccaagcgc
agcccagcggcctctcagcggccctcgtcgtcgtcgacatcgtcatcgtcgtcgttaaga
aagacgtcttcgaaagtccctcccaaaggccagatgcggttgcaggcgttcttcaccaag
ccatctgcgccaccgccgtcggcacccccagcgctcgcggctgatgcggagacatcgacg
acggtgacgacagcacccgaggccgaagagcagccatcgcagacgtcggtctcgaccacg
gggcccgatgctgtgcatcagggccgatcccgctcgtcgtcaccggaactgatcgagtcg
tttgaagaggccgatccgagcagccctcagaaacacgcgcgcaccgcctcgtcgacctca
tccaacggctcggcctcgacgctggcaacgtccgccgctgccgaaccttctgcggcagag
cgggtcgaggcgtcgatggcgtggggcgccatctttgcgccgctcccgccgccgacgtgc
cgggtgcacggcgagacggccaaggcgtggagggtcaacaagccgggcccgaaccacgga
cgcaagttctggctgtgctcgcggcccgtcggacccgggtacgagaagagcgggagggca
aagggcgacgtcaaccccgagtaccggtgcaactttttccagtgggactcggagtggaag
ggcgaggcgtccaagaggcgccggagggaggagcatgaggcgtgcgaggctgctgcgggc
gtttcgtttgcagaggtggggaaacagaagagggccacagcaggtggcggcggcaggggc
ggagcggagatgattattggatcagacgatggcgcgccgcacaagcgggtcaagtcgtcc
aagtga
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integrated database retrieval system
