Pseudozyma flocculosa: PFL1_00064
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Entry
PFL1_00064 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFL1_00064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfp03041
]
PFL1_00064
Spliceosome [BR:
pfp03041
]
Complex B
Other components
Prp19-related factors
PFL1_00064
Complex C
PFL1_00064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RRM_1
zf-CCCH_3
RRM_occluded
zf-CCCH_9
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
19314198
NCBI-ProteinID:
XP_007875752
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSAPESEVEETPILCETCLGPNPYVRMAKQPRGMACKVCSRPFTVFRWNPGVGMRFKKTE
ICTTCAKIKNVCQTCILDLQYGLPVQVRDTALNLKQSMPNADANRHHYIQAMESQLEGAT
SLIDSSAGPSSRAGQELLKKMARRDPGYKRNRPHLCSFYAKGNCTRGDECPYRHELPVDN
ELSKQNLQDRFHGTNDPVARKMLGAHAKEQGLAPPEDKSVMSLFLSALSPTTTEDEIRTF
FINSVPQLQPHHIKSITLVAASKCAFVNFKTRQAAEWAAERCAIKVELGGKEVRVGWGRS
RPGKKGGSGAGAASTSSAPAAAAEAETAGSLGVPS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaccagaatccgaagtcgaggagacgccaatcctctgcgagacctgcctcggg
cctaacccgtatgtcaggatggccaagcagccccgtggcatggcctgcaaggtctgctcg
agacccttcaccgtcttccgctggaacccgggcgtgggcatgcgcttcaaaaagaccgag
atctgcaccacctgcgcaaagatcaagaacgtctgccagacgtgcatcctcgacctccag
tacggcctgcccgtccaggtgcgcgacacggccctcaacctcaagcagagcatgcccaac
gccgacgccaaccgacaccactatatccaggccatggagtcgcagctcgagggcgccacg
tcgctcatcgactcgtcggccggtccctcgagccgcgcgggccaggagctgctcaaaaag
atggcgcgcagggatccgggctacaagcgcaaccgcccgcacctctgctccttctacgcc
aagggcaactgcacccgcggcgacgagtgcccctaccgccacgagctgcccgtcgacaac
gagctgagcaagcagaacctccaggaccgcttccacggcacaaacgaccccgtggcgaga
aagatgctgggcgcgcatgcaaaggagcagggtctggccccgccagaggacaagagcgtg
atgtcgctcttcctttcggcgctctcgcccacgacgaccgaggacgagatccgcacattc
ttcatcaactctgtaccgcagctgcagccgcaccacatcaagtcgatcacgctcgtggcg
gcgtccaagtgcgcctttgtcaacttcaagacgagacaggcggccgaatgggcggcagaa
cggtgcgccattaaggtggagctggggggcaaggaggtccgcgtcggatgggggcggagc
cggccgggcaagaagggcggcagcggtgcgggcgcggcatcaacgtcgtcggcgccagca
gccgctgccgaggccgagacggccggcagcctcggcgtgccgagctag
DBGET
integrated database retrieval system
