Pseudozyma flocculosa: PFL1_00122
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Entry
PFL1_00122 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp00520
Amino sugar and nucleotide sugar metabolism
pfp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PFL1_00122
Enzymes [BR:
pfp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
PFL1_00122
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Motif
Other DBs
NCBI-GeneID:
19314256
NCBI-ProteinID:
XP_007875810
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MAGVNPYAAPASHGDDALPVASSTAKIDFQHAASLKNTRLTVAAHSLLHPKGTEPVTDKL
YSGFVEHLGRGIYGGIVDNPSDPSPSHLLQPQQFDGQKHTEDRLGFRKDVMKIIAKDGEL
EMPILRWPGGNFVSNYHWQDGIGPISQRPKRVELAWLSTETNRFGTDEFIEYCRELKVEP
YLCLNMGTGTYEEALAWLEYCNGTGDTYWANLRRKNTGKDEPHNVKYWGLGNEMHGPWQV
GFLNATDYTKMAARWAHGLKLVDPSIKLVSCGNQGNSEWDREVLMGLIGIVDYHSIHLYS
MLGHERFSTVVGFDYEKNVFGPAAAERGIEICQSLIDLAKIQNATAILDWNKFDQKVTAR
DVKICYDEWNVWDEVKAPGSNGLEQAYDYTDMLGVCAWLNVLVRKSKDIGIACIAQSVNV
ISPLLTSPDGLLFQTTYWPLRLFSKYMKNGHLLNLGFTPEVYSGPTYPAWIQHMAAPAYV
DVVGLIAHDEQDSNKASIRISVLNRHPSADWAGQFDFEDFKVESVENHTVYSDDLSAKNT
FDKPDTVRPEVTTKTGDEWAQQASWTVRKHSWSFFIFQGSLA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtcaacccctacgctgcccccgcctcgcacggcgacgacgccctccccgtc
gcctcttcgacggccaagatcgacttccagcacgccgcctcgctcaaaaacacccgcctc
accgtcgccgcccactcgctcctccacccaaagggcaccgagcccgtcaccgacaagctc
tactcgggcttcgtcgagcacctcggccgcggcatctacggcggcattgtagacaacccg
agcgaccccagcccctcgcacctcctccagccccagcaatttgacggccagaagcacacc
gaggaccgcctcggcttccgcaaggatgtcatgaagatcatcgcaaaggatggcgagctc
gagatgcccatcctccgctggcccggaggcaactttgtcagcaactaccactggcaggac
ggcatcggacccatctcgcagcgccccaagcgcgtcgagctcgcctggctctcgaccgag
accaaccgcttcggcaccgacgagttcatcgagtactgcagggagctcaaggtcgagccc
tacctctgcctcaacatgggcacgggcacctacgaagaggccctcgcctggctcgagtac
tgcaacggcaccggcgacacctactgggccaacctcaggcgcaagaacacgggcaaggac
gagccgcacaatgtcaagtactggggcctcggaaacgagatgcacggcccctggcaggtc
ggcttcctcaacgccaccgactacacaaagatggccgcccgctgggcccacggcctcaag
ctcgtcgacccgagcatcaagctcgtctcgtgcggcaaccagggcaactcggagtgggac
cgcgaggtcctcatgggcctcattggcatcgtcgactaccactcgatccacctctactcg
atgctcggccacgagcgcttcagcaccgtcgtcggcttcgactacgagaagaacgtcttt
ggcccggcggcggccgagcgcggcatcgaaatctgccagtcgctcatcgatctggcaaag
atccagaacgcgacggccatcctggactggaacaagtttgaccaaaaggtgacggcgcgc
gacgtcaagatctgctacgacgagtggaacgtgtgggacgaggtcaaggcgcccggcagc
aacggcctcgagcaggcatacgactacaccgacatgcttggcgtgtgcgcctggctcaat
gtcctcgtgcgcaagtcgaaggacattggcatcgcctgcatcgcccagagcgtcaatgtc
atctcgccgctcctcacctcgcccgatggcctcctcttccagacgacctactggcccctc
cgcctcttttccaagtacatgaagaacggccacctcctcaacctcggcttcacgcccgaa
gtctactccggcccgacctacccggcatggatccagcacatggcggcgccggcgtacgtc
gacgtcgtgggtctgattgcgcacgacgagcaggacagcaacaaggcgagcatccggatc
agtgtgctcaaccgccacccctccgccgactgggcgggtcagtttgatttcgaggacttc
aaggtcgagagcgtcgagaaccacacggtctactcggacgacctctctgccaagaatacc
tttgacaagccggacacggtcaggccggaggtgacgaccaagacgggcgacgagtgggcc
cagcaggccagctggactgtgaggaagcactcgtggagcttctttatcttccagggtagc
cttgcctga
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