Pseudozyma flocculosa: PFL1_00139
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Entry
PFL1_00139 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfp03041
]
PFL1_00139
Spliceosome [BR:
pfp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PFL1_00139
Complex C
U4/U6.U5 tri-SnRNP related factors
PFL1_00139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MA3
MIF4G
HEAT_5MP1_2
Cnd1
Motif
Other DBs
NCBI-GeneID:
19314273
NCBI-ProteinID:
XP_007875827
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MSSKDSPDARSPSPARSPSPSRPASASPSPARAPASAEPSPQQKRKRSASFSSASSSSSR
SDSRSPPPRSRRRRSSRSPDARAKDDGRSSRALVAAAKREEEDKATAAEKRTAEKGEQLR
SALAKLSATKAGGAYIPPARLKALMAEAAAADPGSVEYQRMSWDALKKSITGLVNKVAAD
NIKNIVPELFGGANLIRGRGLFCRSIMRAQGLSLPFTPVFAALAAIVNTKLPMVGELLVT
RLVSQFRRSFKRNDKPVCNSTAMFIAHLVNQRVAHELLALEILVLLLEKPTDDSVEIAVS
FMREVGAFLAEEAPKANNSIFDRFRAVLYEGEISKRVQYMIEVLSQVRRDGFKDNPRIPE
ALDLVEEDDQITHRIGLDDELNVEEGLNVFKKDPDFLDNEEKYREIKAEILGEDEDSDEG
SSGSSSGDESDSESSDSDDAEDLQAKVDIQDRTETNLVNLRRTIYLTIMSSLDFEESIHK
LLRLDIKEGQEIELCNMIVECCSQERTYSKFYGNMGERLCKLNRIWSQCFEEGFRNYYDT
IHRYETNRLRNIARFFGNLVATESISWACFEIVHMNEEDTTSSSRIFIKILFQELQQQLG
LKELATKFKEPSMQEYWTGLFPTDNPKNTRFSINYFTSIGMGVLTEGMREHLKNAPKLLM
AQRQAALKAKGRGTDSDTDTDSSSDLSSSSLSSSTLSDSSRSYSSRSYSSRSRSRSRSRS
RSRSASYSRSPSPRRRRGRSRSRSYDSRSRSRSYSYSRSRSRSRSYSSRSRSYSRSRTPP
RRSNGRSRGRSPSRSRSRSRLRSRSYTPPPAAPRDRGRSYSRSPPPAKRPTRDRSLSASR
SPSPPPRQEYGRERPNGKGKERSLSPAREPRRDGGGRRDDDRYDAPRAERRERYDDRYPP
PPRGGGDRYDGRGGRRPEYDEGSYSRGRERYDDPRDRRR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaaggactcacccgatgcacgctcgccctcgcccgcacgctcgccctcaccc
tcgcgcccggcctccgcatccccctctcctgcacgcgccccggcctcagcagagccatcg
ccacagcagaagcgaaagaggtccgcctccttctcctcggcctcatcttcttcgtcccgc
tccgactcgcgctcacctccgccgcggtccaggcggcgcagatccagtcgctcgcccgac
gcccgcgcaaaggatgacgggcgcagcagccgcgccctcgtggctgcggccaagcgcgag
gaggaggacaaggcaacagcggcagagaaacgcacagccgaaaagggcgagcagctgagg
tcggcgctcgccaagctctccgcgaccaaggctggtggagcgtacatcccgcccgcccgc
ctcaaggcgctcatggccgaggcggccgccgcagacccgggtagcgtcgagtaccagcgg
atgagctgggacgcgctcaagaagagcatcaccggtctcgtcaacaaggtcgccgccgac
aacatcaagaacatcgtccccgagcttttcggcggcgccaacctcatccgaggccgcggc
ctcttctgccgctccatcatgcgcgctcagggcctctcgctgcccttcacgccagtgttt
gccgccctcgccgccatcgtcaataccaagctgccgatggtgggcgagctgctggtgacg
cgcctcgtctcccagttccgcaggtcgtttaagcgtaacgacaagcccgtctgcaactcg
accgccatgttcatagcccatctggtcaaccagcgcgtggcgcacgagctgctcgccctc
gagatcctcgtcctgctgctcgagaagcccacagacgacagcgtcgagatcgccgtcagc
ttcatgcgcgaggtcggcgccttcctcgccgaagaggcgcccaaggccaacaacagcatc
tttgaccgcttccgcgccgtcctgtacgagggcgagatcagcaagcgggtccagtacatg
atcgaggtgctctcccaggtgcgccgcgacggcttcaaggacaacccgcgcatccccgag
gccctcgacctggtcgaggaggacgaccagatcacgcaccgcatcggtctcgacgacgag
ctcaacgtcgaggagggcctcaacgtgttcaagaaggaccccgacttcctggacaacgag
gaaaagtaccgcgagatcaaggccgagatcctgggcgaggacgaggacagcgacgagggc
agctcggggtcgtcgtcgggcgacgagtcggacagcgagagcagcgacagcgacgacgcc
gaggacctgcaggccaaggtcgacatccaggaccggaccgagacgaacctcgtcaacctg
aggaggaccatctacctgaccatcatgtcgtcgctcgactttgaggagagcatccacaag
ctgctgcggctggatatcaaggagggccaggagatcgagctgtgcaacatgatcgtcgag
tgctgctcgcaggagcgcacctacagcaagttctacggcaacatgggcgagaggctgtgc
aagctcaaccgcatctggtcgcagtgcttcgaggagggcttccgaaactactacgacacg
atccaccggtacgagaccaaccggctgcgcaacattgcgcgcttctttggcaacctggtg
gcgaccgagagcatcagctgggcgtgctttgagatcgtccacatgaacgaggaggacacc
acgagcagctcgcgcatctttatcaagatcctcttccaggagctgcagcagcagctgggc
ctcaaggagctggcgaccaagttcaaggagcccagcatgcaagagtactggaccggcctc
ttccccaccgacaaccccaagaacacgcgcttctcgatcaactactttaccagcatcggc
atgggcgtcctcaccgagggcatgcgcgagcacctcaagaacgcgcccaagctgctcatg
gcccagcgccaggcggcgctcaaggcaaagggccgcggcaccgacagcgacaccgatacc
gattcgtcgagcgacctgtcgagcagctcgctcagctcgtcgacgctcagcgacagcagc
cgctcctactcttcgcgatcctactcgtcgaggtcgcggtcgaggtctaggtcgaggtcg
aggtcgagatcggcgagctactctcgctccccgtcgccgcgcaggaggcggggtcggtcg
cggtcccgctcgtacgactcgcgctcgaggtccaggagctacagctactctcggtcccgc
tcgcgctcgcggtcgtacagcagcaggtcgaggtcttactcgcgctcgaggacgccgcca
aggcggtccaacggcagatcaaggggtcgttcgccttcccgatcgcgctcgcgctcgagg
ttgaggtcgaggtcctacaccccgcctcctgccgcccctcgcgatcgcggcagatcgtac
tcgcgttcgccgccgcccgccaagcgcccaacccgagaccgatctctgtccgcctctcga
tcaccatctccgccaccgcggcaggagtacggacgggagaggccgaatgggaaaggcaag
gagcgctcattgagccccgcccgcgaaccgaggcgggacggaggcggaaggagggacgac
gaccgctacgatgcgccccgtgccgagcggagagagaggtacgacgaccgatacccgccg
ccacctcgcggaggcggagatcggtacgatggcaggggcggtaggcggccagagtacgac
gagggatcgtactcgaggggcagggagaggtacgacgatccgagagatcgtcgtcgttga
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