Pseudozyma flocculosa: PFL1_00393
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Entry
PFL1_00393 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_00393
03036 Chromosome and associated proteins [BR:
pfp03036
]
PFL1_00393
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PFL1_00393
Chromosome and associated proteins [BR:
pfp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PFL1_00393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
Tex_central_region
SH2
HHH_9
S1
B12-binding
Motif
Other DBs
NCBI-GeneID:
19314526
NCBI-ProteinID:
XP_007876080
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MDEEDAVPPAHFQDDEEGVPSDEEEGEPTMRNNGNLVGSGGEDSSEEEDDDDPEEARRIA
EGFIAEDDEEEEGSDEESRRRRRRRRKKRKQVEEDFEVDEDDLELLAENTGQVRQKEPHR
LKRIRRGPSSPGAEDDVESNQKTLAAIFEDDDDDDEPAGRRDLDLDEDDDLPSVGRAIRA
EVSRKRGPEVGYEDDGLDDFIEEDEDEEEMRDLDEEEREARRRERREEKRRARMSGSAAD
PAKAGIDREAWDEIHDIFGNGEDYYWALEEDDEDGLEIDKKAKMEYKDIFEPAQIAERML
TVEDERIKRTDVPERMQLAMPGEEGLKLLSRKLSDAELFEAAKWASTRISPRCNAEFLDD
AGVQSRFRTEFLNCVRLMLAYMLNDLLEVPFLYQHRFDELEQVAFDSVEQRYKGIDLLTR
RELYTLSGLGLKFKNLLERKEALRETFERLNLGPQEAPPTAAEGEGEQDAEAAAARAAEA
ASAEEQKRVFEDMLEQATSLEEISDLTEWLTMQYGQRMRDAQKLADGGDAAADDMEGLTI
NGGAKSAAAAGNFKKPSMVGQYERVKGTVISEFARNFGISSVELAANVTGAARRYIPEDQ
PLPPLEYAEQFVGAEWGTFTSEIALSKAKLLLVQDIGKDPLLKREIRQLFKDSAEINIEP
TERGMVKIDEQHPYANFKFLRGKPVRLIPQQPAQYLQILQAEADLLIKLDIGLRDVVLSR
FETRLYTNYASEGLGEASQLWNAQRREIISEALKEHLVPLGRLWLKEWLREECRETLLRF
CEQLMAKRVSMGPIMSRGMEARNRDPKIEEEERVPKVLAVSHGAGDPRKDTVAAVFLDER
GRFREHTSFDDLRPLTPRQLQERELELERTRGKAEFTDHRADFIRLVKDRRPDVIVVSGW
SPRTAELRSIVRELVDEAHQQMCVDDDVQNGEQLLMDVVTCYDDVARIYQHSKRAAEEFP
ELSELGRYCLALARYAQSPVNEFAALGPDLTAVILDPHQRLLPQDRLRLHFERAISSVVN
EVGVEINQSMSSPYLQTMLQYVAGLGPRKAHALTSAISTKLEGTLINREVLIKRDIVTFH
VWTNCVSFLRIDQDMLLEADDDDVPDALDCTRIHPEDYDFPRKMAADALNKHEEDLEGEH
FSMPCRELMEDPDPAGKLGTLDLDNYAQMLFERKGLKKRATLHSCKTELIKPYDDLRPKQ
ALPTPDEILTMFTGETSKTLDKGFVVSVEVTRVQSSNKMAEGFIRCRLDSGIEGIIEAQN
TSDTYPPGPDEPRLHQRIQQGQTLDAIVTQLDKVNCRVELSIRPWDLSQRHPGQGRTPVD
STFYDHDKADRWTKEAANKAKLMSQTRRQNRVVDHPNYHNFNYRQAQSFLANQPRGSVVV
RPSSKGDDHLAVTWKVDDDVYQNIDVLELDKESDYSLGRVLRIEGMGSYSDLDELIVNHV
KPMVNMVEMMMNHEKYKGANEEDLNRYLTNWSLANPSRSVYAFGLNKQRPGYFNLSFKAN
RDAAIQTWPVKVVPWAFKLGQADQLADMAALCNAFKTQYTTQASMARSGRTPAHHGARTP
AGGMTPGGARTPFGRTPMPMAGGMTPAPPGMAPGPPPSFPGAPPPGPPPSMNRPPAGMHP
DRFAQSQFGGGGGGGGGWR
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacgccgtccccccggcccacttccaggatgacgaggagggtgtcccc
tcggacgaggaagagggagagcccaccatgaggaacaacggcaacctcgtcggatcaggc
ggcgaggacagcagcgaggaagaggacgacgacgacccggaagaggccaggcgcatcgcc
gagggcttcatcgccgaagacgacgaggaagaggagggcagcgacgaagagtcccggcgg
aggaggaggcggaggaggaagaagaggaagcaagtcgaagaggatttcgaggtcgacgag
gacgacctggagctgctcgcggagaacacgggccaggtcaggcaaaaggagccgcaccgc
ctgaaacgcatccgtagaggcccctcgtcgccgggcgccgaggacgatgtcgagtccaac
caaaagacgctcgccgccatctttgaggacgacgacgacgacgatgagcccgccggtcgg
agggatctcgacctcgacgaggacgacgacctgccctcggtcggcagggcgatccgagcc
gaggtgtcgcgcaagcgcgggccagaggtcggctacgaggacgacggcctcgacgacttt
atcgaggaggacgaggacgaggaggagatgcgcgacctcgacgaggaggagagggaggcg
cgaaggcgcgagaggcgcgaggagaagcggagggccaggatgtccgggtccgccgctgac
ccggccaaggccggcatcgaccgcgaggcctgggacgagatccacgacatttttggaaac
ggagaggactactactgggcgctcgaggaggacgacgaggacgggctcgagatcgacaag
aaggccaagatggagtacaaggacatcttcgagccggcgcagatcgccgagcgcatgttg
acggtggaggacgaacgcatcaagcgcaccgacgtgcccgagcgaatgcagctggccatg
cccggcgaagagggcctcaagctgctcagtcggaagctgagcgacgccgagctctttgag
gcggcaaagtgggcctcgacaaggatctcgccccgctgcaatgccgagttcctcgacgac
gccggcgtgcagtcccgcttccgcaccgagttcctcaactgcgtccggctgatgctcgcc
tacatgctcaacgacctgctcgaggtgcccttcctctaccagcaccgcttcgacgagctg
gagcaggtcgcattcgactcggtcgagcagcgatacaagggcatcgacctgctcacgcgg
cgcgagctctatacgctcagcggtctcggcctcaagttcaagaacctgctggagaggaag
gaggcgctgcgagagaccttcgagcgcctcaacctcgggccccaggaggcgcccccgaca
gcggccgagggcgagggagagcaggacgcagaggccgccgccgcccgcgccgccgaggct
gcgtcggccgaggagcagaagcgggtcttcgaggacatgctggagcaggccacgagcctc
gaggagatctcggacctgaccgagtggctcacgatgcagtacggccagcgcatgcgggac
gcccagaagctcgccgacggcggcgatgcggccgccgacgacatggagggcctcacgatc
aacggcggggccaagtctgcggccgcagcgggcaacttcaagaagcccagcatggtcggc
cagtacgagcgcgtcaagggcaccgtcatctccgagtttgccaggaactttggcatcagc
tcggtcgagctcgcggctaacgtcaccggcgccgcgcgccgctacattcccgaggatcag
ccgctgcccccgcttgagtacgccgagcagtttgtgggcgccgagtggggcacgttcacg
tcggagattgcgctgtccaaggcaaagcttctgctcgtccaggacattggcaaggacccg
ctgctgaagcgcgagatccgccagctgttcaaggactctgccgagatcaacattgagccc
accgagcgcggcatggtcaagatcgacgagcagcacccgtatgccaacttcaagttcctg
cgcggcaagccggtgcgcctgatcccgcagcagccggcgcagtacctccagatcctccag
gccgaggccgacctgctgatcaagctcgacatcggccttcgcgacgtggtgctgtcgcgc
ttcgagacgcgcctctacacaaactacgccagcgaggggctcggcgaggcgagccagctg
tggaacgcgcagcggcgcgaaatcatctccgaagcgctcaaggagcacctcgtgccgctt
ggccgcctctggctcaaagagtggctgcgcgaggagtgcagggagacgctgctccgcttc
tgcgagcagctcatggccaagcgcgtctcgatgggccccatcatgtccaggggcatggag
gcgcgcaaccgcgaccccaagatcgaggaagaggagcgcgtccccaaggtgctcgccgtc
tcgcacggcgcgggcgaccccaggaaggacacggtcgccgccgtcttcctcgacgagcgc
ggccgcttccgcgagcacacctcgttcgacgatctgcggccgctgacgccgaggcagctg
caggagcgcgagctcgagctcgagaggacgcgcggcaaggccgagttcaccgaccaccgc
gccgatttcatccggctggtcaaggaccgccggccggacgtcatcgtggtcagcggctgg
agcccgaggacggccgagctgaggagcatcgtcagggagctggtcgacgaggcgcaccag
cagatgtgcgtcgacgacgacgtccagaacggcgagcagctgctgatggacgtcgtcacg
tgctacgacgacgtggcgcgcatctaccagcacagcaagcgcgccgccgaagagttcccg
gagctgagcgagctcgggcggtactgcctggcgctggcgcgctacgcccagtcgccggtc
aacgagtttgccgcgctgggcccggacctgacggcggtgatcctcgacccgcaccagcgg
ctgctgccgcaggaccgcctccggctgcactttgagcgcgccatctcgtcagtggtcaac
gaggtcggcgtcgagattaaccagtcgatgtcgagcccgtacctgcagacgatgctgcag
tacgtggcgggcctgggtccgcgcaaggcgcacgcgctgacgagcgccatcagcaccaag
ctcgagggcacgctcatcaaccgcgaggtgctcatcaagcgcgacattgtcacgttccac
gtgtggaccaactgcgtctcgttcctccgcatcgaccaggacatgctgctcgaggccgac
gacgacgacgtgcccgacgcgcttgactgcacgcgcatccatcccgaggactacgacttc
ccgcgcaagatggccgccgacgcgctcaacaagcacgaggaggacctcgagggcgagcac
ttcagcatgccgtgccgcgagctgatggaggacccggacccggcgggcaagctgggcacc
ctcgacctcgacaactacgcgcagatgctctttgagcgcaaggggctcaagaagcgcgcc
acgctccactcgtgcaagacggagctgatcaagccgtacgacgacctgcgccccaagcag
gcgctgccgacgcccgacgagatcctcaccatgttcacgggcgagacgtccaagacgctc
gacaagggctttgtcgtttcggtcgaggtgacgcgcgtgcagagcagcaacaagatggcc
gagggcttcatccggtgccgcctcgactcgggcatcgagggcatcatcgaggcgcagaac
acgagcgacacctacccccccggtcccgacgagccgcgcctgcaccagcgcatccagcag
ggccagacgctcgacgccatcgtgacgcagctcgacaaggtcaactgccgcgtcgagctc
agcatccggccatgggacctcagccagcgccacccgggtcagggccgcacgcccgtcgac
tcgaccttctacgaccacgacaaggcggaccgctggacaaaagaggcggccaacaaggcc
aagctcatgagccagacgcggcggcagaaccgcgtcgtcgaccaccccaactaccacaac
ttcaactaccgccaggcgcagagcttcctcgccaaccagccgcgcggcagcgtcgtcgtc
cggcccagctccaagggcgacgaccacctcgccgtcacgtggaaggtcgacgacgacgtc
taccagaacattgacgtgctcgagctggacaaggagagcgactactcgctgggccgcgtg
ctgcgcatcgagggcatgggctcctactcggacctcgacgagcttatcgtcaaccacgtc
aagccgatggtcaacatggtcgagatgatgatgaaccacgaaaagtacaagggcgccaac
gaggaggacctgaaccggtacctgaccaactggtcgctggccaacccgtcgcgctcggtg
tacgcgtttgggctcaacaagcagcggccgggctactttaacctgtcgttcaaggccaac
cgcgacgcggcgatccagacgtggccggtcaaggtggtgccctgggcgtttaagctgggc
caggccgaccagctggccgacatggcggcgctctgcaacgcgttcaagacgcagtacacg
acccaggcctcgatggccaggagcggccgcacgccggcccaccacggcgccaggacgccc
gccggcggcatgacgcctggaggcgcccggacgccgtttggacgcacgccgatgcccatg
gccggaggcatgacgcccgccccgccgggcatggcacccggaccgccaccgagcttcccg
ggcgcaccgccacccggtccgccgccgtcgatgaaccgtccgccggcgggcatgcacccg
gatcgcttcgcacagtcccagtttggcggcggtggcggtggtgggggtggctggaggtag
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integrated database retrieval system