KEGG   Pseudozyma flocculosa: PFL1_00393
Entry
PFL1_00393        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K11292  transcription elongation factor SPT6
Organism
pfp  Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_00393
   03036 Chromosome and associated proteins [BR:pfp03036]
    PFL1_00393
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     PFL1_00393
Chromosome and associated proteins [BR:pfp03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     PFL1_00393
SSDB
Motif
Pfam: SH2_2 YqgF HHH_7 HTH_44 SPT6_acidic Spt6_S1 Tex_central_region SH2 HHH_9 S1 B12-binding
Other DBs
NCBI-GeneID: 19314526
NCBI-ProteinID: XP_007876080
LinkDB
Position
Unknown
AA seq 1639 aa
MDEEDAVPPAHFQDDEEGVPSDEEEGEPTMRNNGNLVGSGGEDSSEEEDDDDPEEARRIA
EGFIAEDDEEEEGSDEESRRRRRRRRKKRKQVEEDFEVDEDDLELLAENTGQVRQKEPHR
LKRIRRGPSSPGAEDDVESNQKTLAAIFEDDDDDDEPAGRRDLDLDEDDDLPSVGRAIRA
EVSRKRGPEVGYEDDGLDDFIEEDEDEEEMRDLDEEEREARRRERREEKRRARMSGSAAD
PAKAGIDREAWDEIHDIFGNGEDYYWALEEDDEDGLEIDKKAKMEYKDIFEPAQIAERML
TVEDERIKRTDVPERMQLAMPGEEGLKLLSRKLSDAELFEAAKWASTRISPRCNAEFLDD
AGVQSRFRTEFLNCVRLMLAYMLNDLLEVPFLYQHRFDELEQVAFDSVEQRYKGIDLLTR
RELYTLSGLGLKFKNLLERKEALRETFERLNLGPQEAPPTAAEGEGEQDAEAAAARAAEA
ASAEEQKRVFEDMLEQATSLEEISDLTEWLTMQYGQRMRDAQKLADGGDAAADDMEGLTI
NGGAKSAAAAGNFKKPSMVGQYERVKGTVISEFARNFGISSVELAANVTGAARRYIPEDQ
PLPPLEYAEQFVGAEWGTFTSEIALSKAKLLLVQDIGKDPLLKREIRQLFKDSAEINIEP
TERGMVKIDEQHPYANFKFLRGKPVRLIPQQPAQYLQILQAEADLLIKLDIGLRDVVLSR
FETRLYTNYASEGLGEASQLWNAQRREIISEALKEHLVPLGRLWLKEWLREECRETLLRF
CEQLMAKRVSMGPIMSRGMEARNRDPKIEEEERVPKVLAVSHGAGDPRKDTVAAVFLDER
GRFREHTSFDDLRPLTPRQLQERELELERTRGKAEFTDHRADFIRLVKDRRPDVIVVSGW
SPRTAELRSIVRELVDEAHQQMCVDDDVQNGEQLLMDVVTCYDDVARIYQHSKRAAEEFP
ELSELGRYCLALARYAQSPVNEFAALGPDLTAVILDPHQRLLPQDRLRLHFERAISSVVN
EVGVEINQSMSSPYLQTMLQYVAGLGPRKAHALTSAISTKLEGTLINREVLIKRDIVTFH
VWTNCVSFLRIDQDMLLEADDDDVPDALDCTRIHPEDYDFPRKMAADALNKHEEDLEGEH
FSMPCRELMEDPDPAGKLGTLDLDNYAQMLFERKGLKKRATLHSCKTELIKPYDDLRPKQ
ALPTPDEILTMFTGETSKTLDKGFVVSVEVTRVQSSNKMAEGFIRCRLDSGIEGIIEAQN
TSDTYPPGPDEPRLHQRIQQGQTLDAIVTQLDKVNCRVELSIRPWDLSQRHPGQGRTPVD
STFYDHDKADRWTKEAANKAKLMSQTRRQNRVVDHPNYHNFNYRQAQSFLANQPRGSVVV
RPSSKGDDHLAVTWKVDDDVYQNIDVLELDKESDYSLGRVLRIEGMGSYSDLDELIVNHV
KPMVNMVEMMMNHEKYKGANEEDLNRYLTNWSLANPSRSVYAFGLNKQRPGYFNLSFKAN
RDAAIQTWPVKVVPWAFKLGQADQLADMAALCNAFKTQYTTQASMARSGRTPAHHGARTP
AGGMTPGGARTPFGRTPMPMAGGMTPAPPGMAPGPPPSFPGAPPPGPPPSMNRPPAGMHP
DRFAQSQFGGGGGGGGGWR
NT seq 4920 nt   +upstreamnt  +downstreamnt
atggacgaggaggacgccgtccccccggcccacttccaggatgacgaggagggtgtcccc
tcggacgaggaagagggagagcccaccatgaggaacaacggcaacctcgtcggatcaggc
ggcgaggacagcagcgaggaagaggacgacgacgacccggaagaggccaggcgcatcgcc
gagggcttcatcgccgaagacgacgaggaagaggagggcagcgacgaagagtcccggcgg
aggaggaggcggaggaggaagaagaggaagcaagtcgaagaggatttcgaggtcgacgag
gacgacctggagctgctcgcggagaacacgggccaggtcaggcaaaaggagccgcaccgc
ctgaaacgcatccgtagaggcccctcgtcgccgggcgccgaggacgatgtcgagtccaac
caaaagacgctcgccgccatctttgaggacgacgacgacgacgatgagcccgccggtcgg
agggatctcgacctcgacgaggacgacgacctgccctcggtcggcagggcgatccgagcc
gaggtgtcgcgcaagcgcgggccagaggtcggctacgaggacgacggcctcgacgacttt
atcgaggaggacgaggacgaggaggagatgcgcgacctcgacgaggaggagagggaggcg
cgaaggcgcgagaggcgcgaggagaagcggagggccaggatgtccgggtccgccgctgac
ccggccaaggccggcatcgaccgcgaggcctgggacgagatccacgacatttttggaaac
ggagaggactactactgggcgctcgaggaggacgacgaggacgggctcgagatcgacaag
aaggccaagatggagtacaaggacatcttcgagccggcgcagatcgccgagcgcatgttg
acggtggaggacgaacgcatcaagcgcaccgacgtgcccgagcgaatgcagctggccatg
cccggcgaagagggcctcaagctgctcagtcggaagctgagcgacgccgagctctttgag
gcggcaaagtgggcctcgacaaggatctcgccccgctgcaatgccgagttcctcgacgac
gccggcgtgcagtcccgcttccgcaccgagttcctcaactgcgtccggctgatgctcgcc
tacatgctcaacgacctgctcgaggtgcccttcctctaccagcaccgcttcgacgagctg
gagcaggtcgcattcgactcggtcgagcagcgatacaagggcatcgacctgctcacgcgg
cgcgagctctatacgctcagcggtctcggcctcaagttcaagaacctgctggagaggaag
gaggcgctgcgagagaccttcgagcgcctcaacctcgggccccaggaggcgcccccgaca
gcggccgagggcgagggagagcaggacgcagaggccgccgccgcccgcgccgccgaggct
gcgtcggccgaggagcagaagcgggtcttcgaggacatgctggagcaggccacgagcctc
gaggagatctcggacctgaccgagtggctcacgatgcagtacggccagcgcatgcgggac
gcccagaagctcgccgacggcggcgatgcggccgccgacgacatggagggcctcacgatc
aacggcggggccaagtctgcggccgcagcgggcaacttcaagaagcccagcatggtcggc
cagtacgagcgcgtcaagggcaccgtcatctccgagtttgccaggaactttggcatcagc
tcggtcgagctcgcggctaacgtcaccggcgccgcgcgccgctacattcccgaggatcag
ccgctgcccccgcttgagtacgccgagcagtttgtgggcgccgagtggggcacgttcacg
tcggagattgcgctgtccaaggcaaagcttctgctcgtccaggacattggcaaggacccg
ctgctgaagcgcgagatccgccagctgttcaaggactctgccgagatcaacattgagccc
accgagcgcggcatggtcaagatcgacgagcagcacccgtatgccaacttcaagttcctg
cgcggcaagccggtgcgcctgatcccgcagcagccggcgcagtacctccagatcctccag
gccgaggccgacctgctgatcaagctcgacatcggccttcgcgacgtggtgctgtcgcgc
ttcgagacgcgcctctacacaaactacgccagcgaggggctcggcgaggcgagccagctg
tggaacgcgcagcggcgcgaaatcatctccgaagcgctcaaggagcacctcgtgccgctt
ggccgcctctggctcaaagagtggctgcgcgaggagtgcagggagacgctgctccgcttc
tgcgagcagctcatggccaagcgcgtctcgatgggccccatcatgtccaggggcatggag
gcgcgcaaccgcgaccccaagatcgaggaagaggagcgcgtccccaaggtgctcgccgtc
tcgcacggcgcgggcgaccccaggaaggacacggtcgccgccgtcttcctcgacgagcgc
ggccgcttccgcgagcacacctcgttcgacgatctgcggccgctgacgccgaggcagctg
caggagcgcgagctcgagctcgagaggacgcgcggcaaggccgagttcaccgaccaccgc
gccgatttcatccggctggtcaaggaccgccggccggacgtcatcgtggtcagcggctgg
agcccgaggacggccgagctgaggagcatcgtcagggagctggtcgacgaggcgcaccag
cagatgtgcgtcgacgacgacgtccagaacggcgagcagctgctgatggacgtcgtcacg
tgctacgacgacgtggcgcgcatctaccagcacagcaagcgcgccgccgaagagttcccg
gagctgagcgagctcgggcggtactgcctggcgctggcgcgctacgcccagtcgccggtc
aacgagtttgccgcgctgggcccggacctgacggcggtgatcctcgacccgcaccagcgg
ctgctgccgcaggaccgcctccggctgcactttgagcgcgccatctcgtcagtggtcaac
gaggtcggcgtcgagattaaccagtcgatgtcgagcccgtacctgcagacgatgctgcag
tacgtggcgggcctgggtccgcgcaaggcgcacgcgctgacgagcgccatcagcaccaag
ctcgagggcacgctcatcaaccgcgaggtgctcatcaagcgcgacattgtcacgttccac
gtgtggaccaactgcgtctcgttcctccgcatcgaccaggacatgctgctcgaggccgac
gacgacgacgtgcccgacgcgcttgactgcacgcgcatccatcccgaggactacgacttc
ccgcgcaagatggccgccgacgcgctcaacaagcacgaggaggacctcgagggcgagcac
ttcagcatgccgtgccgcgagctgatggaggacccggacccggcgggcaagctgggcacc
ctcgacctcgacaactacgcgcagatgctctttgagcgcaaggggctcaagaagcgcgcc
acgctccactcgtgcaagacggagctgatcaagccgtacgacgacctgcgccccaagcag
gcgctgccgacgcccgacgagatcctcaccatgttcacgggcgagacgtccaagacgctc
gacaagggctttgtcgtttcggtcgaggtgacgcgcgtgcagagcagcaacaagatggcc
gagggcttcatccggtgccgcctcgactcgggcatcgagggcatcatcgaggcgcagaac
acgagcgacacctacccccccggtcccgacgagccgcgcctgcaccagcgcatccagcag
ggccagacgctcgacgccatcgtgacgcagctcgacaaggtcaactgccgcgtcgagctc
agcatccggccatgggacctcagccagcgccacccgggtcagggccgcacgcccgtcgac
tcgaccttctacgaccacgacaaggcggaccgctggacaaaagaggcggccaacaaggcc
aagctcatgagccagacgcggcggcagaaccgcgtcgtcgaccaccccaactaccacaac
ttcaactaccgccaggcgcagagcttcctcgccaaccagccgcgcggcagcgtcgtcgtc
cggcccagctccaagggcgacgaccacctcgccgtcacgtggaaggtcgacgacgacgtc
taccagaacattgacgtgctcgagctggacaaggagagcgactactcgctgggccgcgtg
ctgcgcatcgagggcatgggctcctactcggacctcgacgagcttatcgtcaaccacgtc
aagccgatggtcaacatggtcgagatgatgatgaaccacgaaaagtacaagggcgccaac
gaggaggacctgaaccggtacctgaccaactggtcgctggccaacccgtcgcgctcggtg
tacgcgtttgggctcaacaagcagcggccgggctactttaacctgtcgttcaaggccaac
cgcgacgcggcgatccagacgtggccggtcaaggtggtgccctgggcgtttaagctgggc
caggccgaccagctggccgacatggcggcgctctgcaacgcgttcaagacgcagtacacg
acccaggcctcgatggccaggagcggccgcacgccggcccaccacggcgccaggacgccc
gccggcggcatgacgcctggaggcgcccggacgccgtttggacgcacgccgatgcccatg
gccggaggcatgacgcccgccccgccgggcatggcacccggaccgccaccgagcttcccg
ggcgcaccgccacccggtccgccgccgtcgatgaaccgtccgccggcgggcatgcacccg
gatcgcttcgcacagtcccagtttggcggcggtggcggtggtgggggtggctggaggtag

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