Pseudozyma flocculosa: PFL1_00583
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Entry
PFL1_00583 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfp03041
]
PFL1_00583
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PFL1_00583
Spliceosome [BR:
pfp03041
]
Complex C
Other components
Complex C specific factors
PFL1_00583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_30
AAA_19
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
19314714
NCBI-ProteinID:
XP_007876268
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MAFWKPGTVRPGSSVDRSTESEGSFDPSLSSSIATENAGLGVQDARQNLPIFKQRDTLLY
MVERYPVTVVVGQTGCGKTTQLPQFLFEAGWASSGHQIACTQPRRVAATSVAARVAQEVG
TVLGEEVGYTIRFEDCSHPSRTRIKYLTDGMLFRECMRDPLLSKYSVIMIDEAHERGAYT
DMLLAILKKIHRKRPELRIIISSATIDAQAFVDFFSPDELPSTVEKQKQRQQETAAIVSL
EGRMHPVELAYATEACSDYVRAAADTVMKIHLQEPQGDILVFLTGREEIDTCLQDLADRM
LNLPQGSLGLDLLPLHAGLTVEEQTAIFAPASRGSRKVVVATNIAEASVTIDGIRYVVDC
GFVKLRTFNHRTGMDMLSVVPESLASATQRAGRAGRTSAGKCYRLFPEEALSTLPAATPP
EMCRSDISMQVLQLKALGIDNLARFEFLPPAPPVEMMAKALEFLASLEVLDDHGRLTKPL
GEQMAEMPVDPMLAKTLLDSASHRCSAEMLSIAAMTSVSNPFIIPDEGRSKAGIEGEVER
RKFTAEEGDHLTLLNVFNAFVDPRIGKSSARWCAAHRLNFKALSRAVNVRSQLEKYLRRF
DLPVVSCLADEDAGGRIRRCLVRGYFKNAARMMPDGSYRSVREGSVLHVHPSSVLFNRSP
STKFVIYHEVVETSKRFMRDLTAIEQDWLAELAPHYYEYARPSRPQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccttctggaagccaggaacagtcaggccaggcagctccgtcgaccgctccaccgag
agcgaaggctcctttgacccctcactctcgtcctcgatcgcgacggaaaatgccggactg
ggcgtgcaggatgccaggcagaacctgcccatcttcaagcagagggacaccctcctctac
atggtcgaaaggtaccccgtcaccgtcgtcgtcggtcagacgggctgtggaaagacgacc
cagctgccgcagttcctctttgaagccggatgggcctcatctggccaccagatcgcctgc
acccagcctcgccgagtcgcagccacctcggtcgcggccagagtcgcacaggaggtcggc
accgtcctcggagaagaggtcggctacacgatccgcttcgaggactgctcccatccatcc
cgcacccgcataaagtacctcaccgacggcatgctcttccgcgagtgcatgcgggacccg
ctgctcagcaagtactcggtcatcatgatcgacgaggcccacgagaggggcgcctacacc
gacatgctcctcgccatcctcaaaaagatccaccgcaagaggcccgagctgcgcatcatc
atctcgagcgccaccatcgacgcccaggccttcgtcgacttcttctcgccagacgagctt
ccttcgacggtcgagaagcagaagcagcgccagcaggagacggcagccatcgtatctctc
gagggtcggatgcatcccgtcgagcttgcctacgccaccgaggcatgctcagactatgtg
cgcgccgccgccgacacggtgatgaagatccacctccaggaaccgcaaggcgacatcctc
gtcttcctcacgggcagggaggagatcgacacgtgtctccaggacctggcggatcggatg
ctcaaccttccgcaaggatcgcttgggctcgacctgctacccctccacgccgggctgacg
gttgaggagcagacggccatctttgcaccggcatcacgcggcagccgcaaggtcgtggtc
gccaccaacattgccgaggcgagcgtgacgatcgacgggatacgctacgtggtcgactgc
ggcttcgtcaagctgcgcacgttcaaccaccgcacggggatggacatgctctctgtggtg
cccgaatcgctcgcctcggcgacgcagcgggcgggcagagcggggcgcacgtcagccggc
aagtgctaccgcctgtttcccgaagaggcgctgtcgacgcttccggctgcgaccccaccc
gaaatgtgcaggtccgacatctcgatgcaggtgctgcagctcaaggcgcttggcatcgac
aatctggccaggttcgagttcctgcctcccgccccgcccgtcgagatgatggccaaggcg
ctggaattcctcgccagcctcgaggtgctggacgaccacggcaggctgacgaagccgctg
ggcgagcagatggccgagatgccggtcgatccgatgctggccaagactctcctcgactcg
gcatcgcaccgctgcagcgccgagatgctgagtatagcagcaatgacctcggtctcgaac
cccttcatcatcccagacgaagggcggtcgaaggccgggatagagggcgaggtggaacga
cgcaagttcaccgccgaagagggcgaccacctgacgctgctcaacgtcttcaacgcgttc
gtcgatccgcgcatcggcaagtcgtcggcgcggtggtgcgccgcgcaccggctcaacttc
aaggccctctcgcgcgccgtcaatgtgcgctcgcagcttgaaaagtacctgcgtcgcttc
gacctccccgtcgtcagctgtttggccgacgaggatgccggggggaggatacggaggtgc
ctcgtccgcggctactttaagaatgcggctaggatgatgcccgatgggtcatatcgcagc
gtcagggaaggttcggtcctacacgtccacccttcctctgtcctcttcaaccgttcgcca
tcgaccaagttcgtcatctaccacgaagtcgtagagacgagcaaacgcttcatgcgcgat
ctcaccgccatcgaacaggactggttggccgaattggcaccgcactattacgagtacgcc
cgtccctctcgtcctcagtga
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integrated database retrieval system
