Pseudozyma flocculosa: PFL1_00617
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Entry
PFL1_00617 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_00617
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFL1_00617
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
Pre-60S particles
Helicases
PFL1_00617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
19314747
NCBI-ProteinID:
XP_007876301
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MAPTKKAPKPKRPVQKNTRNGKPNKSKKAAAASSAATTATASPKKAMRYVPHSSLAWSTV
HVPTEAFSGGAGTTDSTFFHGFSFDDDDFMGLQEIEDVDVEFEKTKDGGKTIKFKAAEYS
IKGKGGKGKKKALVEEQAEAGEAGQSEDEEDEDLRQAPPAAKQSGKRKRTEAAQDVDDYI
SPFAAEEDAIAASASEDQAGNQDEEDGEADFDDDDPIDGEEADLTPDEEDEDDVIDEEAD
EELEDDDLAVAFSKAQSAGLALDGEGDDDEGDDGNFDESLLPGWSALPLHSELKRALYNM
KFEKPTEIQARSLPPALGLQGAESDVSSDEEGDSDADDSEVATVGNKKDVVGISQTGSGK
TLAYGLPILQWLYHNAPGSVPMPSIADEAQDDDDDDSLPPPLGALIITPTRELALQVATH
LSDVIRASCRSSPSDETVSKRKLSQRPHIAVICGGMSEQKQKRMLEGRSRSSGGADIIVA
TPGRLWEMARLDDRLAGRIKRTRFLVLDEADRMVEVGHFAEMEHILKLVSRDSVEAPEDD
AAGSDDGEDDGGDGLEPLTVGVRPSDNMQTFVFSATLSKALQKNLQKRKRISPKDFKKRR
GKKANAAEATTLDDLMERIDFRDERPTVVDLTGGQGLPEGLMETKVECLHTDKDLYLYYF
LLRYPGRTLVFVNSIDGIRRLQPILANLRINVFPLHSQLQQKQRLKNLDRFRATQLSRAK
TAGEKIAAASHDSTNGSLGGSSSVLLATDVAARGLDIPAVDHVVHYQLPRSADSYVHRSG
RTARAGGTGVALALIEPKEKKLWSSLCRTLSRRQDTLALPIIYSLLPALKHRLALSRELD
QKRHKTSKASHEDSWLRSLASEAELDFHNGDSDSDGETPGGSGGGGGKGRKAKIYSAQVR
DLEAQLEVALRQPLKQRGTSRKYITTVDLGGTGKGSLASQLVGDAHHETVLGLDQSSASK
DLSALSSRQPSATAAASRKQKKQKKEKATNAAQPRARVPSAVPVASSAVAAAPASAKKPT
TSIKQKRRAKEMARQVLKMKRAGKQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcacccacaaagaaggctccaaagccaaagcggcccgttcagaagaacacgcggaat
ggcaagccaaacaagtccaagaaagcagccgccgcctcttccgctgcgaccaccgccacc
gcctctcccaaaaaggcaatgagatacgtcccgcattcttccctggcatggtctacggtg
cacgtacccaccgaggccttctcgggcggagcgggaaccaccgattcgaccttcttccac
ggcttcagcttcgacgacgacgacttcatgggcctccaggagatcgaggacgtcgacgtc
gagttcgaaaagacaaaggacggcggcaagacgatcaagttcaaggccgccgagtacagc
atcaagggcaagggaggaaagggcaagaagaaggcgctggtcgaagagcaggccgaggcc
ggtgaggctggacagagcgaggatgaagaggatgaggatctcaggcaggctccgccggcc
gccaagcagagtggcaagcgcaagaggacagaagcagcgcaagacgtggacgactacatc
tcgccgttcgcggcagaggaggatgccattgctgcctcggcatccgaggatcaggctggc
aaccaagacgaggaggacggggaggccgatttcgacgacgacgatcccatcgatggcgag
gaggcggacctcacgcccgacgaagaagacgaggacgatgtcatcgacgaggaagccgac
gaggagctcgaggacgacgaccttgcagtcgccttcagcaaggcgcagtctgcaggcctg
gcgctcgacggcgagggcgacgatgacgagggcgacgatggcaactttgatgagtcgctc
ctgcccggctggtcggcgctccctctccactctgagctcaagcgagcgctctacaacatg
aagttcgaaaagccgacagagatccaagcccgctcgctgccgcccgcactcggccttcag
ggcgccgagagcgatgtctcttccgatgaggagggagacagcgatgccgacgacagcgag
gtcgccacggttggcaacaagaaggacgtggtgggaatctcgcagaccggcagcggtaag
acgcttgcctacgggctgcccatcctgcagtggctctaccacaacgctccgggcagcgta
ccgatgccatcgatcgccgacgaagctcaggacgacgacgacgacgacagtctgccacca
ccgctcggggcgctcatcatcactccgacgcgagaactcgcgctgcaggtggcgacgcac
ctgtcggacgtcatcagggcgagctgtcgctcctcgccctccgacgagaccgtgtcgaag
cggaagctctcgcagcgcccgcatattgccgtcatctgcggaggcatgtcggagcagaag
cagaagcgcatgctcgagggacgcagccgcagcagcggcggtgccgacatcattgtcgcc
acgccaggtcggctgtgggagatggcgaggcttgatgaccgccttgcggggcgcatcaag
cggacccggttcctcgtgcttgacgaggcggaccgcatggtcgaggtgggccacttcgcc
gaaatggagcacatcctcaagctcgtctcgcgcgactccgtcgaggcgcccgaggatgac
gctgcgggctcggacgacggcgaagacgatggaggcgacggtctcgagccccttacggtc
ggcgtgcgcccgtcggacaacatgcaaacctttgtcttctcggccacgctcagcaaggcg
ctgcagaagaacctgcagaagcggaagcggatctcgcccaaggacttcaagaagcgtcgc
ggcaagaaggccaacgcggcagaggccaccacgctcgacgacctgatggagcgcatcgac
ttccgcgacgagcggccgacggtggtcgacctgacgggcgggcagggcctgccagagggc
ctgatggagaccaaggtcgagtgcctgcacacggacaaggacctctacctctactacttc
ctgctgcggtacccgggccggacgctggtgtttgtcaactcgatcgacggcatccgccgc
ctccagccgatcctggccaacctgcgcatcaacgtctttcctctgcacagccagctgcag
cagaagcagcggctcaagaacctcgaccgcttccgcgccacgcagctctcgcgcgccaag
acggcgggcgagaagattgcggccgcctcgcacgactcgacgaacggcagcctcggcgga
tcgagctcagtgctcctcgccaccgacgtagcggcgcgtggtctcgacatccccgccgtc
gaccacgttgtgcactaccagttgcctcgcagcgccgactcgtacgtccaccgaagcgga
cgtaccgctcgtgcgggcggtaccggcgtggcattggcgctcatcgagcctaaggagaag
aagctgtggagcagtctgtgccggacgctgagcaggagacaagacacgcttgcgctgccc
atcatctactctctgctgccggcgctcaagcaccgccttgcgctgtcgcgcgagctcgac
caaaagcggcacaagacgagcaaggcgtcgcacgaagacagctggctccgctcgctcgcg
tcggaagccgagctcgatttccacaacggcgactcggactcggatggcgagacgcccggt
ggcagcggcgggggcggcggcaaggggcggaaggccaagatctactctgcgcaggtgcgc
gacctcgaggcgcagctcgaggtggcgttgcggcaacccctcaagcagcgggggaccagc
aggaagtacatcaccaccgtcgatctgggtggtacgggcaaggggagcttggcgagccag
ctggtcggtgatgcgcatcacgaaaccgtcctgggtctcgaccagagcagcgcgtccaag
gacctttccgccctctcttcccgccaaccctcggcgaccgctgcagcgtcacgcaagcag
aagaagcagaaaaaggaaaaggcgacgaacgctgcacagccccgtgcgcgcgtcccctct
gcggtccccgtcgcctcttcggccgtcgcggcggctcctgcgtccgccaagaagccgacg
acgtccatcaagcagaagcgccgcgcaaaggagatggccaggcaggtgctcaagatgaag
cgcgccggcaaacagtaa
DBGET
integrated database retrieval system
