Pseudozyma flocculosa: PFL1_00794
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Entry
PFL1_00794 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFL1_00794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_00794
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFL1_00794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
19314924
NCBI-ProteinID:
XP_007876487
LinkDB
All DBs
Position
Unknown
AA seq
1512 aa
AA seq
DB search
MSATAPSSPATRPSGAAAAPPPQQPPNASLPQPLIPLSFIDAPSQRFYACSLAIATQAWK
YTHVVKALFSTSDDASSAFSLSTAILVDFTVLFVLSRLGIPRLDPRLAAAATPARPAQAT
SSISASPSQGPGLTYARYAVIFGSLVLVDSILLGQGTANPVVWLFSTLLGFLKAASSLVG
LELDLGPLGADAFARQLSISEGRVRIRDLVQPKSHILGQHTVHILPYSTAKLSPSSACYC
VGPGTPSVTIPVLFNNTEPDLLQYSVTDFVTGEAALFNISVTDLVALPASRAGRERPDED
LQVAAAAATKNRKHDVEGLGADEDELDEPLSFLKGSTYQERARLRAAKRSKGAKSAVRKG
PAGAVGRTKAATQLLYHLPVHSAGRVRLERVLDKARNDARLSSAEALVVECPTSTFVAPK
SAVAEASNWLEAAHKCPGESAELAVQVRGLTPLELQYRRSWEPSAQQGSGRNRHVEPLDE
VQTISRISSPHHASPLLLPEAESILSPVERIALAQERTRAAARSAGNTHEDYAWAAASEV
SIPLSVELERAGRYTYELESVKDACGNVVKAHGQAAPSLGPGSKVKRKLVKGMGKDVPST
VTSQQVVVHPRAKFAFSARSCQPGYPIKMLRTQSHLNVSLLANDGDRESGPWEVDLHFDP
DNSAAGQDPLARAPATPWVRPLTMESGAGIAQVQVSAPGTYRIGKARGRYCTGEVESPWT
CEVIDVPPPTAKISFSSIEDRCAGPVGVKALSILTGSPPFELEYEVRRHGERSHPIRRRI
MQTRDELEFRPNTEGPVTYRFLKLHDANYRNMILDGPSFTQDVHPLATARFAASHGRSAG
QPIVVHSCAGNRAQADVELGGTGPWDLTYIVRGAGRSETKEVKKLTSPRHTLDFELAPEL
VEAGGRATVSLVSIRDAKGCERQLATSDLNIEIRKARSTVGFLPVTYDTRRQVEILDGRQ
TRLPLRLEGDGPWTVTYSWRADESSPEQEETLQLSDSSAAIPARRPGVYTIKSIRDAYCP
GSVLADQESYHVHVRSRPAVHFVEDAGQVVRNGSVVRAPVCQGRPDAVDVRMTGNFPLQI
AYEHQAPSWSGGADVDGSQALGSAIGEIASQGKRRRNSFTSAQTVSNLELSTLTPGWHTY
TIESVGDTAYPPAALQGFPRDAPRRLEQMVYPLPSASFVHGGKVPSFCIGDSLDGKTHDG
KASGGFEPTVRLSGTPPFTVEFELHDITSRSSASASAAAAGGSRSHVKTIVRSDVTTHDY
RLRIPRSDFTFETTGKWTLQVTRVRDAHGCEFAPLSAGRAVPASARIELEVAETAGISAS
STRDDYCVGESVDFVLQGTPPWTVTYDFEGKTTRAVSRRPEFARVAERPGTLRIKSVAHQ
QNQCRTLLDEGKVEGMVKTIHDLPSVRVSEGRHYVEDLREGNQAEIIFDLVGEAPFSFTY
QRTEPADTHSRPKVLETHTVQGILEDRFSIWTSVEGTWSVTWLMDRWCQVSLDAHSGSST
SLGKSRLAITPS
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacagctccctccagcccggcgacccgcccgagcggagcggcagcggcacca
ccaccgcagcaaccacccaacgcctccctcccccagccactaatacccctttccttcatc
gacgcaccctcccagcgtttctacgcctgctccctggcaatagccactcaggcctggaag
tacactcacgtggtcaaggccctcttctccaccagcgacgacgccagctcggcattcagc
ctctcgaccgccatcctcgtcgactttaccgtcctctttgtcctctcgcgcctcggcatc
ccgaggctcgatccccgtcttgccgccgccgcgacacccgcgcgtccggcacaagcgaca
tcctcgatctcggccagcccatcgcaaggccctggcctcacctatgcccgctacgccgtc
atctttggctcgctcgtcctcgtcgactcgatcctcctcggccaaggcaccgccaacccg
gtcgtctggctcttttccaccctcctcggcttcctcaaggcggcatccagtctcgtaggg
ctcgagctcgaccttggacctcttggcgccgatgcgttcgcacgccagctcagcatcagc
gagggccgcgtgaggatccgcgacctggtgcagccaaagagccacatcctcggccagcac
accgtccacatcctaccctacagcaccgcaaaactttctccctcctcggcgtgctactgc
gtcggtcctggcacgccctcggtcaccatccccgtcctcttcaacaacaccgagcccgac
ttgcttcagtactcagtcaccgactttgtcaccggcgaagcggcgctcttcaacatcagc
gtcaccgacctcgtcgcgctgccggcctccagggctggcagggagcgaccggacgaggat
ctgcaggtggccgcagcagcggcgaccaagaaccgcaagcacgacgtcgagggcctgggc
gccgacgaggacgagctcgacgagcctctctccttcctcaaaggctccacctaccaggaa
agggccaggctgagggcggccaagcgctcaaagggcgcaaagagcgccgtccgcaagggt
ccagccggcgcggtcggccgtaccaaggcggccacgcagctcctctaccacctgcccgtc
cacagcgctggtcgggtaaggcttgagagggtcctcgacaaggcgaggaacgatgcccga
ctctcttctgcggaggcgctcgtcgtcgagtgcccgacgtcgacatttgtcgcgccaaag
tcggcggtggccgaggcttccaactggctcgaggccgcgcacaagtgtccgggcgagagc
gccgagctggcggtccaggtccggggccttactccgttggagttgcagtaccgacgctcc
tgggagccctcggcgcagcagggctccggccgcaaccgccacgtcgagccgctcgacgag
gtccagaccatctcgcggatctcttcgccccaccacgcctcgccgctgctgctgcccgag
gccgagtcgatcctttctcccgtcgagcgcatcgcgctggctcaggagaggacgagagcc
gccgcccgaagtgccggcaacacgcacgaggactacgcctgggccgccgcgagcgaggtg
tcgatcccgctcagcgtcgagctggagcgcgcggggcgctacacgtacgagcttgagagc
gtcaaggatgcgtgcggcaatgtggtcaaggcgcacggtcaggccgcgccatccctcggg
ccgggcagcaaggtcaagcgcaagctcgtcaagggcatgggcaaggacgtgccttccacc
gtcacgtcgcagcaggtcgtcgtccacccgcgcgccaagtttgccttcagcgcaaggagc
tgccagccgggctacccgatcaagatgctgcggacccagagccatctcaacgtctccctg
ctggccaacgacggcgaccgagagtcgggcccgtgggaggtcgacctgcactttgatccg
gacaacagcgctgccgggcaggacccgctagcgcgagcgccggccacgccgtgggtgcgg
ccgctgacgatggagagcggcgcgggcatcgcccaggtccaagtcagcgcgcccggcacc
tacaggatcggcaaggcgcgcggcaggtactgcaccggcgaggtcgagtcgccctggacc
tgtgaggtcatcgacgtgccgccgcccaccgccaagatctcgttttccagcatcgaggac
cgctgcgccggccccgtcggcgtcaaggcgctgtcgatcctcaccggcagcccgccgttt
gagctcgagtacgaggtcaggcgtcacggcgagaggtcgcaccccatccgacgccgcatc
atgcagacccgcgatgagctcgagttccgcccaaacaccgagggccccgtcacctaccgg
ttcctcaagctgcacgacgccaactaccgcaacatgatcctcgacggccccagcttcacc
caggacgtccaccctctggcgacggcgcgctttgcggccagccatggcagatcggccgga
cagcccatcgtcgtccacagctgcgcaggcaaccgggcgcaggcggacgtcgagctgggc
ggcaccgggccctgggacctcacctacattgtgcgaggcgcgggccgctccgagaccaag
gaggtcaagaagctcacaagcccgaggcatacgctcgactttgagctcgcgcccgaactc
gtcgaggccggcggccgggccactgtcagcctggtcagcatccgcgacgccaagggctgc
gagcgtcagctggccacgagcgacctcaacatcgagatccgcaaggcgaggtcgacggtg
ggcttcctgcccgtcacctacgacacgcgcaggcaggtcgagatcctcgatggccgccag
acgcggttgccgctgcgcctcgagggcgacgggccctggacggtcacctactcctggagg
gccgacgagagctcgcccgagcaagaggagacgctgcagctgtcggacagctccgccgcc
atcccggcgaggcgcccgggcgtgtacacgatcaagtcgatccgcgatgcgtactgtccc
ggctcggtgctcgccgaccaggagtcgtaccacgttcacgtccgctcgaggcccgcggtg
cactttgtcgaggatgccggccaggtcgtccggaacggatccgtcgtgcgcgctcccgtc
tgccagggacgtccagacgccgtcgatgtccgcatgacgggcaacttccccctgcagatc
gcttacgagcaccaggccccttcgtggtctggcggcgccgacgtcgacggttcccaggcg
ctcggctcggccattggcgagattgcctcgcagggcaagcgccggcgcaactcgttcacc
tctgcgcagacggtcagcaacctggagctgtcgaccctgacgcccggctggcacacgtac
acgatcgagtcggtcggcgacacggcgtacccgcccgcggcgctgcagggcttcccgcgc
gatgcgccgagacggctcgagcagatggtctacccgctgccctcggcgagctttgtccac
ggcggcaaggtgccgtcgttttgcatcggcgacagcctcgatggcaagacgcacgacggc
aaagccagcggcggcttcgagcccacggtgcggctgagcggcacgccgccgttcaccgtc
gagtttgagctgcacgacatcacgtcgcgctcgtcggcatcggcatcggcggcggcggcg
ggaggatcgcgcagccacgtcaagacgattgtgcgatccgacgtcacgacgcacgactac
cggctgcgcatcccgcgcagcgactttacgtttgagacgacgggcaagtggacactgcag
gtgacgcgggtgcgcgacgcgcacgggtgcgagtttgcgccgctgagcgccggccgcgcg
gtgcccgcttcggcgagaatcgagctcgaggtggccgagacggcgggcatctctgcctcg
tcgacgcgcgacgactactgcgtgggcgagtcggtggactttgtgctgcagggcacgccg
ccgtggacggtgacgtacgacttcgagggcaagacgacgcgcgccgtgtcgcggcggccc
gagtttgcgcgcgtcgccgagcggccgggcacgctgcgcatcaagagcgtggcgcaccag
cagaaccagtgccgcaccctgctcgacgagggcaaggtcgagggcatggtcaagacgatc
cacgaccttccctcggtgcgcgtgtccgaggggcggcattacgtcgaggatctgagagag
ggcaaccaagcggaaatcatctttgacctggtcggcgaggcgcccttctcgtttacgtac
caacgtaccgaaccggcggatacgcacagccgtcccaaggtgctggaaacgcatacggtc
cagggtatcctcgaggatcgattcagcatctggacctcggtcgaaggaacctggtcagtc
acctggctcatggaccgttggtgccaggtcagcctcgatgcgcatagcggctcctcgacc
tcgctcggcaaatcgaggttggcaatcaccccatcttga
DBGET
integrated database retrieval system
