Pseudozyma flocculosa: PFL1_00802
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Entry
PFL1_00802 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFL1_00802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfp03041
]
PFL1_00802
Spliceosome [BR:
pfp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PFL1_00802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
19314932
NCBI-ProteinID:
XP_007876495
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MPPKRPLRNVFGDADDDDDDPSLSSTKPAVPQKRTKTGTQPVSIIQGLASSSSSGSGIST
TNKNGAVPASAPSSGTSSSTSGVMSSSVQAQIEAARARIQAQMSNLAARPAGVPPSRPPQ
PPQASPTAATPAVARSTPAAAPRPPPSARPAAPVPSSLEDIQRKVAEAKARLLAQQGLQH
AQRPPAAPTSTISSATTAPPPSAKSETPKAPPGIHPLLLGGDAAKIQEQVRSVAPKFASL
QANARPSTATSGTRGANGRGAVPPRANPYLADSIDAAASDSGADQPKPKPKSMHKGFSFH
RPGRHIQEAEEVRREAQMEDLKRRIQESARKAGLQDDLAGDEKVLQRLPPPDVEWWDIGL
LPNKSYDDVPDDEDVATMLDKGKARETTDVGASTAAAVTGPLLYGKDSPIDPYVQHPIPI
PAPSDQIKVAPAGVRLTKKEMKKMRRQRRAAEQQDKRDRIKMGLLPPDPPKVKLSNLMRV
LTSEAVADPTKVEARVRREILARKEAHERANAERKLTPEQRKEKALRKVEQDEAKGIGCQ
VYRIKHLVAPWHKKKVRYNAQDYHLTGLTIFNPSFALVIVEGASKGLKGFKRLMTVRIDW
TDPGRMNDGGGGGGGDDDDDDGGGGEGSSKAQVTAAADVGSSSRRARFDELATRDASEVD
LAENRCELIFEGPLRERNFASGFRAVACPNDHSAKEVLGPKLEGYWDLARRWVPPEEDGL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagagaccccttcgcaacgtctttggcgacgcagacgatgacgacgacgac
ccttcgctctcgtcgaccaagcccgccgtcccgcaaaaacgcacaaagaccggcacacag
cccgtcagcatcatccaaggcctagcctcgtctagcagcagcggcagcggcatcagcacc
accaacaagaatggcgcagtccccgcctctgccccctcgtcgggcacctcgtcgtccacg
tccggcgtcatgtccagcagcgtacaggcacagatcgaggccgcgcgggcaaggatccag
gcacagatgtccaacctcgccgcacgcccagctggggtacctcccagccgtcctcctcag
cccccccaggcctcgccaaccgccgccacgcctgccgtagcacggtccaccccagccgca
gcaccacgaccaccaccctcggctcgacccgccgcgcccgtcccatcatcgctcgaagac
attcagagaaaggtcgcagaggcaaaagccaggctgctcgcccagcagggactgcagcac
gcacagaggccacccgcagctcccacttcgacaatcagctccgcgaccacagccccgccg
ccgtctgccaaatcagagacccccaaggcgccccctggcatccaccctctgcttctcggc
ggcgatgctgccaagattcaggaacaggtgcgctcggtggctcccaagttcgcctccctc
caggccaatgcccgaccctcgaccgcgaccagcggcacccggggcgccaacgggcgtggc
gctgtcccgcctcgagccaacccctacctcgccgactccatcgacgcagccgcctccgac
agcggcgcagatcagccaaagccaaagccaaagagcatgcacaagggtttctccttccac
cgaccgggtaggcacatccaggaggccgaagaggtgcgcagggaggcacagatggaagac
ctcaagcgcaggatccaggagagcgcgcgcaaggccggcctgcaagacgacctggccggc
gacgaaaaggtgctgcagcgtctgccgccgcccgacgtcgagtggtgggacatcggcctg
ctgcccaacaagagctacgacgacgtgccggacgacgaggacgtggccaccatgctcgac
aagggcaaggcgcgcgagacgaccgacgtgggcgcctcgaccgcagccgccgtcactggg
ccgctgctttatggcaaggactcgcccatcgacccttacgtccagcatccgatcccgatt
ccagcgccctcggaccagatcaaggtggcgccggcgggcgtccggctgacgaaaaaggag
atgaagaagatgcgccggcagcggcgggcggccgaacagcaggacaagcgcgaccggatc
aagatgggcctgctgccgccggacccgcccaaggtgaagctgtcgaacctgatgcgcgtc
ctgacctcggaggccgtggccgatccgaccaaggtcgaggcgcgggtgcggcgcgagatc
ctggcgcgcaaggaggcgcacgagcgtgccaatgccgagcgcaagctgacgcccgagcag
cgcaaggaaaaggcgctgcgcaaggtcgagcaggacgaggccaaggggatcgggtgccag
gtgtaccggatcaagcacctcgtcgcgccctggcacaagaaaaaggtgcggtacaatgcg
caagactaccacctcaccggcctgaccatcttcaacccttcgtttgcgctcgtcattgtc
gagggggcgtccaaggggctcaaggggttcaagcggctcatgacggtgcgcatcgactgg
accgatccgggaaggatgaacgacggcggcggcggcggcggcggcgacgacgacgacgac
gatggcggcgggggcgaggggtcgtcaaaggctcaggtcacggcagcggcggatgtgggg
tcatcgagccgacgggcgcggttcgacgagctggccacgcgcgacgcctcggaagtcgac
ctggccgagaaccggtgcgagctcatcttcgagggcccgctgcgcgagcgcaactttgcc
agcggcttccgcgccgtcgcgtgtcccaacgaccactcggccaaggaggtcctcggtccc
aaactcgagggctactgggacctcgcccggcgctgggtgccgcctgaagaggatgggctc
tga
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