Pseudozyma flocculosa: PFL1_01083
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Entry
PFL1_01083 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K03678
exosome complex component RRP45
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFL1_01083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_01083
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PFL1_01083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
LigT_PEase
Motif
Other DBs
NCBI-GeneID:
19315211
NCBI-ProteinID:
XP_007876774
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MPPGQLLEPSLTESTFVAAALASGLRTDGRSFNQSRDISIKFGEELGSCSVAIQGTRVQT
SVRATLVPPRSDRPYEGFLQLTTDISPMAGTEYDTSGGATSSARNREILFDRLLEKAIRR
TEALDRESLCVIAGEQVFQIHLTIHLLSDCGAALDAAVLCSMLSLRHFRRPDFTIEDGKV
TLYGEDERVGVPLAIHHTPLCVSFAIFEIQSQEAKMDEHYDDDDVRREEERDEEEQDALA
PSRDEADDPTSRPKPSSNAATIAASADRTVALLDPSQLEETLCDSKLVLVLNAQREICVL
DKAGGAPLDADKLLETLKAGLLRVKELSERVEAELKRDREVRIVEVV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccggtcagctgctcgaaccgtcgttgaccgagtcgacgttcgtcgcggccgca
ctagccagcggcctccgcaccgatggcaggtccttcaaccagtcgcgcgacatctcgatc
aagtttggcgaggaacttggcagctgttcggttgccatccaggggacaagagtccagacg
tcggttcgagccacgctagtgccgccgcggtcagaccggccatacgagggcttcctacaa
ctgaccacggacatctcaccaatggcgggcaccgagtacgacacgtcgggcggcgccaca
tcgtcggcgcgcaaccgcgagatcctctttgaccgccttctcgaaaaggccatccggcgc
accgaggcgctggaccgcgagtcgctctgcgtgatagcgggcgagcaggtcttccagatc
cacctcaccatccacctcctgtccgactgcggcgccgcgctcgacgccgccgtgctctgc
tccatgctctcgctacgccacttccgtcggccggatttcaccatcgaggacggcaaggtc
acgctgtacggcgaggacgagagggtcggcgtccccctcgccatccaccacacgccgctc
tgcgtgagcttcgccatctttgagatccagagtcaggaggcaaagatggacgagcactac
gacgacgatgacgtgaggcgggaagaggagagggacgaggaggagcaggacgcccttgcg
ccgtcccgggacgaggccgacgaccccacttcccggcccaagccctcgtcgaatgcagcg
acgatagcggcgagcgccgacaggacggtggcgctcttggatccgagccagctcgaggag
acgctgtgcgatagcaagctcgtcctcgtcctcaacgcccagcgcgaaatctgcgtgctg
gataaggccggcggtgctccgctcgacgccgacaagctgctggagaccctcaaggccggc
ctgctcagggtcaaggagctcagcgagagggtagaggcggagctcaagagggatcgggag
gtcaggattgtagaggtcgtctag
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integrated database retrieval system
