Pseudozyma flocculosa: PFL1_01180
Help
Entry
PFL1_01180 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfp04121
]
PFL1_01180
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFL1_01180
Ubiquitin system [BR:
pfp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PFL1_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_30
AAA_19
AAA_12
Motif
Other DBs
NCBI-GeneID:
19315306
NCBI-ProteinID:
XP_007876874
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MSIRSPPTVISLLSSPSPPYGRPSDAEPSANASATTSSSTTNTAPRRPVNFLAAPPQPPP
PRSALKRPRSPTIPTSAPSKLQKSKDDSAAPRFQPRLSTNSWQRSRSHQVVGLSDDPPQR
RTILGLFPRELVFVILAHLSFGDIRSLLKADRRLRPFVHLRSFAVFRKQLAHFQYHERRF
NELVKRKGDAVYQSQSQADSGADPFGEPMPSIEGASIAGSSSGSSGGPEQAGKEVESAFL
EAYIEALQALGKERPPWSPSELVAIVGRSFPGPRLGARLQQFVTDLLLGEVQASQAFEVV
DGPTAVELLCLIRLFCGLLRISRGFAKEGTTQSEASQTAHYIDADCRDAVRGFFQPRHRR
LSGGGAFQLTDEQSRFVNRDVRVGDLIKVQAFAGTGKTRSLVAYATARPHQRFLYIAFNT
HAAADARYRFPSNVDCRTMHSVCLAQFQPAQNQKLASIKPKDVVSLFEQELPRGQKTVRP
SSMLDSSTQQQDPKLTDTAVASYVLRTLNQFMYSDDRTFDVAKHVPKQMQRETDLPPGRV
LRLAERLWEAVRKGKTEQGRPVHCPHDAYVKMLQLTPPSPPSAFFAKYDVLLLDEAQDLS
AAQVSILLRARRTCGILVVGDAHQKIYGFRGGTARAFNDQLYAPTATFQLTQSFRFGDSV
AKVASKILGLKAPAPWQARPDRPWLSGVKGDGDRVYVLRAAHSPDAGSAAAAAAAAAGMS
GQAQATRAPQQVLRHTKIFRSNKCLVETALVYGVLLEEPHRIYLKTSQKLSQSSVVALLR
DGYILYNGRGGPMSSGSILREFSGWKELVQRVEAEDQGGDGMLALVASLEDLFRCDDFLD
RLDSLKSRFSATEKDASIVLTTCHQSKGLEWDRVVVADDFRPSYLAGKGRLQVDSLWLQD
EVNLMYVAITRAKRELIVSGAIREWLAAIDGLCMLKAERMDGLTCLACGKEGQMGVVRVF
RLGEHDFVLRPSGGGGGRDADGEIGPNAAPRRPDGMVAADDGDDDSDSDDRGPAPPYKKA
VGCFACLDAHRMELDEDVVQFLDLYRQTQHKAATAAAAAERASSSRAGEQTTSRTASTSS
SNGGGGTTGATTRAITAIPPPAAPAQATTIVDRTKVPLLVHPQRQANWDRIQVETVNTVL
RWCCLERYPGLLPDPYRLDDPRADRGGRE
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccgcagccctcccaccgtcatatcgctcctctcatccccctcgccaccttac
ggacgcccctctgacgcagagccgtccgccaacgccagcgccaccacgtccagctcaaca
acgaacaccgccccacggcgccccgtcaacttcctcgccgctccaccgcaaccacctccg
ccgcgttctgctctcaaacggcccagatctcccaccatcccgacatcggcgcccagcaag
ctccagaagagcaaggacgactcggccgcgccacgcttccaacccagactcagcaccaac
tcctggcagcgatcgcgctcccaccaggtcgtcggtctctcggacgacccgccacagcgg
cgcaccatcctcggcctctttccacgagagcttgtctttgtcatcctcgcccacctctcc
tttggcgacatccgctccctgctcaaggccgacaggaggctgcgaccgtttgtccacctg
cgctcctttgccgtcttccgcaagcagctcgcccacttccagtaccacgagcgcaggttc
aacgagctcgtcaaacgcaagggcgatgccgtctaccagtcccagtcgcaagccgactcc
ggcgccgatcctttcggcgagcccatgccctcgatcgaaggcgcgtcgatcgctggcagc
agcagcggcagcagcggtggacccgagcaggcgggtaaggaggtcgagtccgccttcctt
gaagcctacatcgaggcgctccaggccttgggcaaggaacggccaccatggtcaccgtcg
gaactcgtcgccatcgtcgggaggtctttccccggcccgaggttgggggcccgactgcag
cagttcgtgacggacctcctgctgggcgaggtgcaggcgtcgcaggcgtttgaggtggtc
gacggcccgacggcagtcgagctgctgtgcctcatacgactcttctgcggcctcctccgc
atctcgcgcggcttcgcaaaggaaggcaccacccagtcggaagcgtcgcagacggcccac
tacatcgacgccgactgccgcgacgccgtccgcggcttctttcaaccgcggcatcgacgc
ctgagcggtggcggtgcgttccagctgaccgacgagcagagccgcttcgtcaatcgcgac
gtccgcgtcggcgacctgatcaaggtccaggccttcgccggcacgggcaagacccgctcg
ttggtggcctacgccaccgcccggccccaccagcgcttcctctacatcgccttcaacacc
cacgccgccgccgacgcgcgctaccgcttcccctccaacgtcgactgccgcaccatgcac
tcggtctgcctcgcccagttccagcccgcgcagaaccagaagctcgcctcgatcaagcca
aaggacgtcgtttcgctttttgagcaggagctgccgcgtggccagaagacggtccgtccg
agcagcatgctcgactcgtcgacccagcagcaggatcccaagctcaccgacaccgccgtc
gcatcgtacgtgctgcgcaccctgaaccagttcatgtactccgacgaccgcaccttcgac
gtcgccaagcacgtgcccaagcagatgcagcgcgagacggacctgcctcccggccgcgtg
ctgcgcctggccgagcggctgtgggaggcggtgcgcaagggcaagaccgagcagggccgg
cctgtccactgcccgcacgacgcctacgtcaagatgctccagctcacgccgccgagcccg
ccgagcgccttcttcgcaaagtacgacgtcctcctcttggacgaggcgcaggacctgtcg
gcggcccaggtcagcatcctgctgcgcgcgcggcggacctgcggcatcctcgtcgtcggc
gacgcccaccagaagatctacggcttccgcggcggcacggcgagggcgttcaacgaccaa
ctctatgcgcccaccgccaccttccagctgactcagagtttccgcttcggcgactcggtg
gccaaggtggcgagcaagatcctcggcctcaaggcgcccgcgccgtggcaggcgcgcccc
gaccgcccttggctgtccggcgtcaagggcgacggcgaccgggtctacgtgctgcgtgcc
gcacattcgcccgatgccgggtcggcggcggcggcggcagcagcagcagcagggatgtcg
ggccaggcgcaagcgaccagggcgccgcaacaggtgcttcgccacaccaagatcttccgc
agcaacaaatgcctcgtcgagacggcgctcgtgtacggcgtgctgctcgaggagccgcac
cggatctacctcaagacgagccagaagctcagccagtcgtcggtcgtggcgcttctgcgc
gatggctacatcctctacaacggccgcggcggtccgatgtcgtctggctcgatcctgcgc
gagttttccggctggaaggagctggtgcagcgcgtcgaggccgaggaccagggcggcgac
gggatgctggcgctggtggcgtcgctcgaggacctcttccggtgcgacgacttcctcgac
cgcctcgactcgctcaagtcgcgcttcagcgccacggaaaaggacgccagcatcgtgctg
acgacgtgccaccagtccaagggcctcgagtgggaccgcgtcgtggtggccgacgacttc
cggccttcgtacctggcgggcaaagggcggctgcaggtcgactcgctctggctgcaggac
gaggtcaacctgatgtacgtcgccatcacgcgcgccaagcgcgagctcatcgtctcgggc
gccatccgcgagtggctggcggccatcgacggcctgtgcatgctcaaggccgaacgcatg
gacggcctgacgtgcctggcgtgcggcaaggaggggcagatgggcgtggtgcgcgttttt
cggctgggcgagcatgactttgtcttgcggcccagcggcggcggcggcggccgcgacgcg
gacggcgaaatcgggcccaacgccgctcctcgccgtcccgatggtatggtcgcggcagac
gacggtgacgacgacagcgacagcgacgatcgtggtccggcgccgccgtacaagaaggcc
gtgggctgctttgcctgtcttgacgcgcatcggatggaactcgacgaggatgtggtccag
ttcctcgatctctaccggcagacgcagcacaaggcagcgacggcggcggcggctgcagaa
cgagcctcgtcgtcgagggcaggcgaacaaaccacttcgaggaccgccagcaccagcagc
agcaacggcggcggcggtaccacgggtgcgactaccagagcgatcacggccataccgcct
ccggccgcaccggcgcaggctaccaccatcgtggaccggacaaaggtgccgctcctggtg
cacccgcagcgccaggccaattgggaccgcatccaggtcgagacggtcaatacggtgctg
cggtggtgctgcctcgagcgctacccgggtctcttgcccgatccgtaccgcctcgacgat
ccccgagcagatcgcggggggcgcgagtag
DBGET
integrated database retrieval system
