Pseudozyma flocculosa: PFL1_01193
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Entry
PFL1_01193 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFL1_01193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_01193
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
Pre-60S particles
RNases
PFL1_01193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AbiEi_3
RNase_T
Motif
Other DBs
NCBI-GeneID:
19315319
NCBI-ProteinID:
XP_007876887
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MFKPLGLLASIPCPDLADGKCQTLRVNCPFSHSSPPPSTHSSIATATAAKTIKSTGTASP
SPSSSLPKRPVLSLGTGTSTISPSVKKSLAPSTAVGTSSAPSQPPAKKARNAYVATSRAS
AAASTSTAVTATTRAPAKAPAPLPPRPATTFSKSATAISASKVATDGWSNVPIQPPTITF
RQHPSSSQISLAQRQGSIKTLYSTFVAAYAPLLNSTHSIVRGAAQRLAHDHTLAQEMQLF
KEATKTSYKSSCVSAILGVKKRNAEVLGNYARLAEQEAVEIEAAADDNSGAAVGSAERAV
MELLLACPETGTALEVRKKQAQAEARAKGKLSKHRLAQAGFICPKGDLERHGFLASLPDE
WREVGGSKPDSVGEYKECIRCGKKFCVGGEMNEVGTERLPQDQHECRYHYGKKRYERAEG
QRGKVQVWRCCGRPVESSAFGDDSCCLGPHVFKEEAASDLNLREGFITTAELSASLADEG
AATDHLDIVALDCELCFTTAGMSLTRLTLISEDGSVILDELVRSRAQVVDYNTRFSGIQP
EQYERDAVLDLAGARRAMGRFVGESTILVGHGLENDLLAMRLVHTTVVDTALLFAHPRGL
PFRLALRDLTSKYLGKIIQASGATVGHSSAEDAQMALELVRWKIVNDPFTPFGGGGGGGG
GGGSGGDGTKKEGDALTDAASASASALAVKPKPKGVPVVGVSV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagccgctcggcctgctcgccagcatcccctgcccggacctcgcagacggcaaa
tgccagaccctccgcgtcaattgccccttcagccactcttcaccgccaccatcgacgcac
agctcgatcgccacagccacagcagcaaagacaatcaaatcgacaggcaccgccagcccc
tcgccctcttcatcgctcccgaagcgtcctgtcttgtctctaggcaccggcacctcgacc
atctcgccctccgtcaaaaagagcctcgccccgtccaccgctgtcggcacctcctctgct
cccagccagccaccggcgaaaaaggctcgcaatgcctacgtagccacatccagagcctcc
gccgccgcctcgacttcgacagccgtcaccgccaccaccagggccccagcaaaggcgcct
gctcccctgccaccacgacccgcgacgaccttctcaaagtctgccaccgccatttccgct
tcaaaggttgccacagatggctggtcaaacgttcctatccagcctcccaccatcaccttc
aggcagcatcccagcagctcccagatctcgcttgctcagcgacagggcagcatcaagacg
ctctacagcacctttgtcgccgcctacgcccccctgctcaacagcacccactcgatcgtc
cgcggcgccgctcagaggctagcccacgaccacaccctagcgcaggagatgcagctcttc
aaggaggccaccaagacgagctacaagtcctcgtgcgtcagcgccatcctcggcgtcaag
aagcgcaacgccgaagtgctcggcaactacgcgcgtctggcagagcaggaggccgtcgag
atcgaggccgctgccgacgacaacagcggcgccgcggtgggctcggccgaaagagccgtc
atggagctgctgctcgcctgtcccgagacgggcaccgcgctcgaggtgcgcaagaagcag
gcccaggccgaagccagggccaagggcaagctgtccaagcacaggctcgcgcaggcgggc
ttcatctgcccaaagggcgacctcgagcgtcacggcttcctggccagcctgcccgacgag
tggagggaggtgggcggcagcaagccggacagcgtcggcgagtacaaggagtgcatccga
tgcggcaagaagttctgcgttggcggcgagatgaacgaggtcggcaccgagcgcctgccg
caggaccagcacgagtgcagataccactacggtaaaaagcgctacgaacgcgccgagggc
cagcgaggcaaggtgcaagtctggcggtgctgcggccgcccggtcgagtcgagcgcgttt
ggcgacgacagctgctgcctgggcccgcacgtcttcaaggaggaggcggcgtcggacctc
aacctgcgcgaaggcttcatcacgacggccgagctgtcggcctcgctggccgacgaaggg
gccgccaccgaccacctcgacatcgtagcgctcgactgcgagctgtgcttcaccacggcg
ggcatgagcctgacgaggctgacgctcatctccgaggacggctccgtcatcctcgacgag
ctggtacgctcccgcgcccaggtcgtcgactacaacacccgcttctcgggcatccagccg
gagcagtacgagcgggacgcggtcctcgacctggcgggcgcccggcgcgccatgggcagg
tttgtgggcgagtcgaccatcctggtggggcacggactggaaaacgaccttctagccatg
cggctggtgcacacgaccgtggtggatacggcgctcctcttcgcccacccgcgcggcctc
cccttccgtctggccctgcgcgatctgacgtccaagtacctcggcaagattatccaggct
tcgggcgccaccgtcgggcactcgagcgccgaagacgcgcagatggccctcgaactcgtc
cgctggaaaatcgtaaacgaccccttcaccccctttggtggaggtggcggcggtggtggt
ggagggggatcaggaggggatgggacgaagaaggaaggtgatgctttgaccgatgcggcg
tcggcctcggcgtcggcgttggcggtcaagcctaagcctaaaggcgtacctgtcgttggc
gtttctgtctaa
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