Pseudozyma flocculosa: PFL1_01208
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Entry
PFL1_01208 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PFL1_01208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_01208
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PFL1_01208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Motif
Other DBs
NCBI-GeneID:
19315334
NCBI-ProteinID:
XP_007876902
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MSGLMYAGTNIGGSGAGDKEKPDLGLDNVAESSFCSYFRGMPKPAAGTVRLFDRNDFYSA
HGSDAILIADVVFKTHSALKYLGGGGKDKGLPSITLSTSAAKNFLRDALTARQMRVEIWS
NGGGKRNNQWTLAKQASPGNLQQLEDMLFVNADIVSSPIVMALKLTTQDGVRTVGAAFAD
ATNRDLGVAEFPENDLFSNVESLLIQLGVKECIVPRDDKGGDVDLAKLRTVIDRCGCVMF
ETKRAEFAPKNIDQDLRRLLKDEAASISIAELDLAAAMGSATALIAYLGLLNDESNFGQY
TLRTHDLSQYLRLDNAALRALNLFPEPGQSANGGNKNASIFGLLNRCKTGQGQRLLGQWL
KQPLVNVHAIEERQNLVEVFVHDVSTRQIVQNDFLKMIPDMHRISKRFQKGVATLEDVVR
VYQAVLRLPGLIQALDDAETPSQVHKDLVASTFLEPLRAHDEALAKLTELVEATVDLDEL
ASHNFVIKPDFDAGLKQIKEALDDVRDKLDDQHRAAGKELKMDIEKKLHLENHSSYGYCF
RVTRTDASLVRNKKGYHDIATVKGGLFFTNGALRELSTEFRDLSERYNRSQSGLVREVIQ
IASTYCPPLEQLNVVVAQLDVIVSFAHVSDNAPVPYVKPKVEEKGKSADLRIHEARHPCL
EVQDDINFIPNDTEMVKGESEFLVITGPNMGGKSTFIRQVGIVALLAQVGCFVPAAEGAT
VPVFDCILARVGAGDSQLKGVSTFMAEMLETATILKTATADSLIIIDELGRGTSTYDGFG
LAWAISEWITTRIGCKCLFATHFHELTNLANQQPHVRNLHVVAHITQRPGGSRQDRDITL
LYKVEPGISDQSLGINVAELANFPPSVIQLAKRKAEELEEPEDDEPTTLSMAEDVTAEGT
ALIEEFMETWAARSEALAADDDAMDESEGGGGGAEGSASKKRRVDAEAQLRELRKCVEEF
RPRIQANAWASKVLESF
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcctcatgtacgccggcaccaacatcggcggctcgggtgcgggcgacaaggag
aagcccgatctcggtctcgacaatgtcgccgagtctagcttctgcagctacttccgcggc
atgcccaagcccgctgccggcaccgttcgcctgtttgaccgcaacgacttctactcggcg
cacggcagcgacgccatcctcatcgccgacgtcgtcttcaagacgcactcggcgctcaag
tacctgggcggcggcggcaaggacaaggggctgccctcgatcacgctcagcacgtcggcc
gccaaaaacttcctccgcgatgccctcaccgcccgccagatgcgcgtcgagatctggtcc
aatggcggcggcaagcgcaacaaccagtggacgctcgccaagcaggcgtcgcccggcaac
ctccagcagctcgaggacatgctctttgtcaatgccgacatcgtcagctcgcccatcgtc
atggcgctcaagctcaccacccaggacggcgtccgcaccgtcggcgctgcctttgccgac
gccaccaaccgcgacctcggcgtggccgagtttccggaaaacgacctgttcagcaacgtc
gagtcgctcctcatccagctcggcgtcaaggagtgtatcgttccgcgcgacgacaagggc
ggcgacgtcgaccttgccaagctgcgcaccgtcatcgaccggtgcggctgcgtcatgttc
gagaccaagcgcgccgaatttgcgcccaagaacatcgaccaggacctgcgccgcctgctc
aaggacgaggccgccagcatctcgatcgccgagctcgacctcgcggcggccatgggctcg
gccaccgccctcatcgcctacctcggcctcctcaacgacgagtccaactttggccagtac
acgctgcgcacccacgacctctcgcagtatctccggctcgacaatgcggcgctgcgtgcg
ctcaacctcttccccgagccaggccagtccgccaacggcggcaacaagaacgccagcatc
tttggcctgctgaaccgctgcaagacgggccagggccagcggctgctcggccagtggctc
aagcagccgctcgtcaacgtccacgccatcgaggagcgccagaacctggtcgaggtgttt
gtgcacgacgtgtcgacgaggcagattgtgcaaaacgacttcctcaagatgatcccggac
atgcaccggatcagcaagcgcttccagaagggcgtggccacgctcgaggacgtggtgcgc
gtctaccaggcggtcctgcgcctgcccggcctgatccaggcgctcgacgacgctgagacg
ccgagccaggtgcacaaggacctggtcgcgtcgaccttcctggagccgctccgcgcacac
gacgaggcgctggcgaagctgacggagctggtcgaggcgacggtcgacctcgacgagctg
gcgtcgcacaactttgtcatcaagcccgacttcgatgcgggcctgaagcagatcaaggag
gcgctcgacgacgtgcgcgacaagctcgacgaccagcaccgcgcggcgggcaaggagctc
aagatggacattgaaaagaagctgcacctcgagaaccactcgtcgtacggctactgcttc
cgcgtcacgcgcaccgacgccagcctggtgcgcaacaagaagggctaccacgacattgcc
acggtcaagggcggcctctttttcaccaacggcgcgctgcgcgagctgagcaccgagttc
cgcgacctctcggagcgctacaaccgttcgcagagcgggctggtgcgcgaggtcatccag
atcgcatcgacctactgcccgccgctggagcagctcaacgtcgtcgtggcgcagctcgac
gtaatcgtcagcttcgcccacgtctcggacaacgcgcccgtgccctacgtcaagcccaag
gtcgaggagaagggcaagtcggccgacctgcgcatccacgaggcgcgccacccgtgcctc
gaggtgcaggacgacatcaacttcatcccaaacgacaccgagatggtcaagggcgagtcc
gagttcctcgtcatcacgggacccaacatgggcggcaagtcgacatttatccggcaggtg
ggcatcgtcgcgctgctggcgcaggtgggctgctttgtgccggcggccgagggggcgacg
gtgcccgtgtttgactgcatcctggccagggtcggggcgggcgacagccagctcaagggc
gtcagcacgtttatggccgagatgctcgagacggccaccatcctcaagacggcgacggcc
gactcgctcatcatcatcgacgagctcgggcgcggcacgtcgacgtacgacggattcggc
ctggcctgggccatctcggagtggatcacgacgcgcatcgggtgcaagtgcctgttcgct
acccacttccacgagctcaccaacctggccaaccagcagccccacgtccgcaacctccac
gtcgtcgcccacatcacccagcgccccggcggctccaggcaggaccgcgacatcaccctg
ctctacaaggtcgagccgggcatcagcgaccaaagcctgggtatcaacgtggccgagctg
gccaacttcccgccctcggtcatccagctggccaagcgcaaggccgaggagctcgaggag
cccgaagacgacgagccgaccacgctgagcatggccgaggatgtgaccgccgaagggacc
gcgctgatcgaggagtttatggagacgtgggcggcgcgatccgaggcgctcgctgcggac
gacgatgccatggacgagagcgagggcggcggcggcggtgccgagggatccgccagcaag
aagcgccgcgtcgatgcagaggcccagctccgggagcttcgcaagtgcgttgaagagttc
cgacctcgcatccaggccaacgcctgggcgagcaaggtgctcgagagcttctga
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integrated database retrieval system
