Pseudozyma flocculosa: PFL1_01250
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Entry
PFL1_01250 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K20305
trafficking protein particle complex subunit 8
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfp04131
]
PFL1_01250
Membrane trafficking [BR:
pfp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
PFL1_01250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_2nd
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
19315376
NCBI-ProteinID:
XP_007876944
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MSDLTVHAALSPRVAILSSPDVDRVIQTNNIPDLAALLRPFEASVSQLSVRTSQLENRLC
QRFPLRFDPLRTFTAAAAPQQDDVLDSVSAHIGANAKHWLAEVDPDGSASPQPADLLQQA
SQRIESLTPWFIHFRDAILHRRSLSPHSTFDHPVALLLAVSSASPDPMNDFARLYETAAA
SSSSSGGPFAAHPFIDPNVLRYYLLLHDVHTSGPDLSQSLEVLDHVKRTYGLHCCLLTIN
SAEEHGSSRNAEDIEALWSDSRPPASPPSAPNSPTTSADVARLLDDEDIKRLKGFVRELT
AQSIVPFMERCVQQWNEQLASSRKGLTGRLFGASRKFFGGSAAKVAASASSSLSNGAGYS
VQHDFYPFASVEAQTRRLADFAFTIRDYKLAAAMYDLGRKDFAGDKAWRHSAVANEMFGL
SHLMLMYTARTPPIDVDSYLSQACHEYALKPAAGGDLGPLRATLLYYEAYRALGYYRPAP
VALQRMANASEEVFGALLLEQAAMADLRRQPKAAVRKCALHLVMAAHRYQSCGQKALSLR
CYAQAAALYRHKAWTSVENHLERELGMQAYNGGDADAAVAHLSTLLRPGQCSAEEHEAWL
KDLLTAYRYAGGSGGGGEGEGDGSTATGKPEVKLPQPLFNPKSARLRVAEDGIGAQGGQS
RVPDSTWTALEGAFMAAGFSSSGSATRKRPATLSSSRDNRAAVDATFWLDVAVENPLNTA
IEVKDIRPHLRPDDGPKAAPQSGDDAGPSSGATATESRFEAEPVDAVMLGPREVRWLSIP
IRVREAGVHRVTHISSVIADELPITESLDKRGKRLGATREQRLTPTYAPDQMLRLTVHEA
EPAITASLASPPSSMLLGEECRVELTLRNVSGEGLRDVRALCNQPDAAVFVVSEAATARA
GSPKASTSFTMPNDLKHVAIQDLVGDDEILAAGQERTVPLLLKASRFGVVELAWLVVFGD
SQGRFHTSRLSHRIEVEPSLEVSVQSRPVFDRAKCDYRLSVEVSNVSLDETVTVTGLSFV
GPCWRCSVEDEPSSSPTSSLSAKVGTSLEPCQAVRLSAVLGRTDSRGDEDHSEAQAGGSM
AYTLHRLQAMLQSREVDAKNAPRPVELLASGTGRLFEEEDEVQAYPPIAASSSSPPISTT
LDSPHHQRLLRQARLRWRQWTLSQHFQALSEADRAAAFVLYEPNDVDVVVHWQQQQQPTR
RGSSYVFGLSLGPSRNHLLSLFDDDGRSAIRSMYAQTVKERGLMLQNLLSSRLATDEAPL
VVDLCPAEEGGSGDSHEAQQDRRTHDFAAKGPTRLGLSVWVRNFSDSLDVDFEVQLGRSE
APSATGAEDDTGEPEAEERGPGSAQWMGRRTLRGTLQPRSAVELAATVRIEGPGLVRPGR
LTVQSRCYLAGRGGGEREGGAGPGAAAPCSQFTQHVDPALAVYFVQAA
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacctcaccgtccacgccgccctctcgcctcgcgttgccatcctctcgtctccc
gacgtcgaccgggtcatccagacgaacaacatccccgacctcgccgccctcctacgacca
ttcgaagcctccgtgtcccagctctcggtccgcacctcgcaactcgagaaccgcctgtgc
cagcgctttcccctccgctttgaccctttgcgcaccttcaccgccgcagccgcaccacaa
caggatgatgtcctcgactcggtcagcgcccatatcggcgcaaacgcaaagcactggctc
gccgaggtcgatccagacggctccgcctcgccgcagccagccgacctcttgcagcaggcc
agccagaggatcgagtccctgacgccgtggttcatccactttcgagacgcgatcctccac
cgacgctccttgagcccgcactcgacattcgaccatcccgtcgccctcctcctcgccgtc
tcctcggccagccccgaccccatgaacgactttgccaggctctacgagacggccgctgcc
tcttcctcgtccagcggcggtccattcgcagcccatcctttcatcgatccaaacgtgctc
aggtactacctcctcctccacgatgtccacacgtctggtcccgacctctcgcagtcgctc
gaagtgctcgaccacgtcaagcggacctacggcctgcactgctgcctgctgaccatcaac
tcggccgaagagcacggctccagccgcaacgccgaagacatcgaggccctctggagcgat
tcgcggcccccagcatcgccgccgtccgcgccaaactcgcccacgacatccgccgacgtc
gcacgcctgctcgacgacgaagatatcaagcggctcaagggctttgtccgcgagctgacg
gcccagagcatcgtgccctttatggagcgctgcgtccagcagtggaacgagcagcttgcc
agctcgcgcaagggcctcaccggccgcttgtttggcgccagccgcaagttctttggcggg
tccgccgcaaaagttgccgcctcggcctcgtcgtcgctctccaacggcgccggctacagc
gttcagcacgacttttacccatttgcctcggtcgaggcgcagacgcggcggctggccgac
tttgccttcaccatccgcgactacaagctcgccgccgccatgtacgacctcggccgaaag
gacttcgccggcgacaaggcctggaggcacagcgcggtggccaacgagatgtttggcctg
tcgcacctcatgctcatgtacacggcgcgcacgccgcccatcgacgtcgacagctacctc
tcccaggcctgccacgagtacgccctgaaacccgccgccggaggcgatttgggcccgctg
cgcgccacgctcctctactacgaagcctaccgcgccctcggctactatcggccggcgccc
gtcgccctccagcgcatggccaacgcgtccgaagaggtgtttggcgcgctgctgctcgag
caggcagccatggccgacttgcggcggcagccaaaggcggcggtgcgcaagtgtgcgctc
cacctcgtcatggccgcacatcgctaccagtcctgtgggcagaaggcgctctcgctccga
tgctacgcccaggccgccgccctctaccgccacaaggcctggacgtcggtcgaaaaccac
ctcgaacgcgagctcggcatgcaggcctacaacggcggggacgccgatgccgccgtcgcc
cacctctcgacgctgctgcgccccggtcaatgctcggccgaagagcacgaagcatggctc
aaggacctgctgacagcatacaggtacgcaggtggcagcggcggcggcggcgagggcgaa
ggcgacggcagcacggctaccggcaagccggaggtgaagctgccccagcccctgttcaac
ccgaagagcgcgaggctccgggttgccgaggacggcatcggtgcgcagggcgggcagtcg
agggtccctgactcgacctggaccgctctcgagggcgccttcatggcagcgggcttctcc
tcgtcgggatcggcgacccgcaagaggccggccacgctctcctcgagccgggacaaccga
gctgccgtcgatgccaccttttggctggacgtggcggtcgagaatcctctgaacacggcg
atcgaggtcaaggacatccgaccgcacctccgacccgacgatgggcccaaagcggcgccc
cagagcggcgatgatgcagggccatcgtccggagcaacggcgacagagtcccgcttcgag
gccgagcccgtcgatgccgtgatgctgggcccccgcgaggtgcgatggctctcgataccc
atccgcgtccgggaagcgggcgttcaccgcgtgacacacatcagctccgtcattgccgac
gagctgcccatcaccgaatcactcgacaagcgtggcaagcgcctcggtgcgacgagggag
cagcgccttacgcccacctacgccccggaccagatgttgcggctgacagtccacgaggca
gagcctgcgatcacggcgtccctcgcatcgccgccttcctcgatgctgctcggcgaggag
tgccgagtcgagctgaccctgcgcaacgtcagcggcgaagggttgcgcgacgtgcgagcg
ctgtgcaaccaacctgatgccgccgttttcgtggtctcggaggcggccacggccagggcg
ggctcaccgaaggcgtcgacgtcgtttacgatgcccaacgacctcaagcatgtggcgata
caggaccttgtcggtgacgacgagatcctcgcagcgggacaggagcggacggtgccgctg
ctgctcaaggccagccgcttcggcgtcgtggagctggcatggctggttgtctttggcgac
agccagggccgcttccacacctctcggctcagtcaccgcatcgaagtggagccgagtctg
gaggtgtcggtgcagagccggccggtgtttgatcgagcaaagtgcgactaccgcctgtcg
gtcgaagtgtccaacgtctcgctcgacgagaccgtcaccgtcaccggcctctcctttgtc
ggcccgtgctggcgatgctcggtcgaggacgagccctcgtcgtcgccaacgtcgtcgtta
tcggcaaaggtcgggacttctctcgagccttgccaagcggtgcggctcagtgctgtgctc
gggcgaacggactcacgaggagacgaggatcacagcgaggcccaggcaggaggatccatg
gcttacaccctccatcgcttgcaggcaatgctgcagagccgagaggtcgatgccaagaac
gcgccacggcccgttgagctcctcgcttccggcaccggcaggttgtttgaggaagaggac
gaggtgcaagcctacccgccgatcgccgccagcagctctagcccgcccatctcgacgacg
ctcgactcgccgcatcaccagcgactgctgcgacaggcccggcttcggtggcgacagtgg
acgctgtcgcagcacttccaggcgctgtcggaggccgatcgagcggctgcctttgtgctg
tacgagcccaacgacgtcgatgtcgtcgtccactggcagcagcagcagcagccgacacgc
cgaggcagcagctacgtgtttgggctgagcctggggccgagccggaaccatctgctgtcg
ctctttgacgacgacgggcggtcggccatccggagcatgtacgcgcagacggtcaaggag
cgcgggctgatgctgcagaacctgctttccagccggcttgccacggacgaggcgccgctg
gtcgtcgatctctgccccgccgaagaaggaggctctggcgattcgcacgaggcgcaacag
gatcggcgcacccacgactttgcggccaagggacccacccgactcggcctgtcggtgtgg
gtgcgcaacttttcagacagcctcgacgtcgacttcgaggtccagctggggcgatcagag
gcgccctcggccacaggcgccgaagacgacactggcgagccggaggcagaggagaggggg
cctggatcggcgcagtggatggggcggcgcacgttgcgcggcacgctccagccgcgctcg
gcggtggagctggcggccacggtgcgcatcgaagggcctggcctggtgcgaccgggccgc
ctgacggtgcagagccggtgctacctggcgggcaggggaggcggcgagagagagggcggt
gccggtcccggtgccgcagcgccgtgcagccagtttacgcagcacgtcgacccggccctc
gccgtgtattttgtccaggcggcctag
DBGET
integrated database retrieval system
