Pseudozyma flocculosa: PFL1_01302
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Entry
PFL1_01302 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_01302
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
PFL1_01302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
Motif
Other DBs
NCBI-GeneID:
19315428
NCBI-ProteinID:
XP_007876996
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MAADTDYASKVASLLSQCLARRIEPSKFLAFAHQAKRRSSPPADDPDPLTAVLVSRLLSS
SVVDPLLSDYLRQAIYGATAQSGTSSDEGPICNALDVTLTLLAHSWSQVRAGQRIEALLS
VLECVSEIVGQGFMMLFSTPGAFRPDSVAFRQKIAATFRQPQQQAAAEDRPDAEPAASQS
APIDEHQAALGYLSINMLLVQLASTAKVASPHNLLAPRIGMALLTHSALPLLSGLQEGLC
SVQTAGEPSSTFSSQAAAAGASVRQIVELIETTLSTLNPTWEAEISLLKELGGQLDKLSR
LFDSSSGGGALDGTLAKMLGEGGALVSGKQPAWDHFIDVAALSQAGEQAQQHPSTQPEVA
LLLRRLVDSNMSWPCKMEAVQMLLLARREQAAPSVTLDQSLTAFYFELLSAAAEACSIVV
ETPSALKGSAETYSTLWRNALCGLMPEVLAQIEQWLDSGCAIALKGERCMPPHARVESAL
KALLITSSDKLEGCESTGTAAAAATHDGDARMDNMLDSVVGAETPTHQPVRAWLLRSLIE
SALARPEAITDEFPGGHKLAEEVQSLSQSLRMDAQLEGLDIASSLENKLASDDLTELLDK
VCRDPGVHHAFSQQLLQQLHYWLEAQDYDSVSRCCKALLANLPALDTLTLYFDPAELATM
LASLLDRGDVGQASDEPSTLCNILLLLQLVCQRYSVAADAVVPSDNRDSFFARFLRASSV
VYRLADLAPDERSLVGRWISALFDNEGISDELTRDSSPRALLRLAPTLFSQSINACNSGI
IDLETLRGGLSYFLQDLLSYTLPAAMRWLLQEVQRVPLLPLLSRSSTSEEVLLSSGLGRD
ATSRTVHLAVVQLILGSETCPPAVRHTVAADFERFLAQPDLARSLKGTDGFDLGSLKSGM
EGFGMTSGGLAKASVWLRTQLGSLATSRLLLTVEPASSLQQWGAEAAASGVLQQMGANRS
AESIQALSMLLALASTGDAKAIPYASVIPLLAVLQHVDLGAVEDKESVVAVAQVVGLSMV
LLRSLASVQTTRVTDMEAMVDAGEPAVPLSTQSPTPASRIVDQLASLVMLKLARLSQSRG
DLCKAFVDALRNAKAEVEEPALQPVLRVLETVAPLVVGQVSQPASSRTAVTAS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacaccgactacgcgagcaaggtcgcatcccttctttcgcaatgcctcgcg
cgcaggatagagccgagcaagttcctggcctttgcacaccaagcgaaacgcagatcatcc
ccgccggccgatgaccccgacccgctgacggccgtcctcgtatcgaggctgctgtcgtcc
agcgtcgtggatccgctactgtccgactaccttcgacaggccatctacggggcaacggcg
cagtcagggacctcgtcggacgaaggcccaatatgcaatgctctcgacgtcaccttgacg
ctgctggctcacagctggtcgcaggtccgggccggtcaacgcatcgaggcgctcttatcc
gtgctcgagtgcgtgtccgagatcgtcggccagggcttcatgatgctgttcagcacgcct
ggtgctttcagaccagactctgtcgcctttcgccagaagatcgcggccacgtttcgacag
ccgcagcagcaggccgccgccgaggacaggccggacgcggagccagcggcatcgcagtcg
gcccccatcgacgagcaccaggccgcgctgggctacctcagcatcaacatgctgctcgtg
cagctggcgtcgacggccaaggtcgcctcgccgcacaaccttctggcgccccggattggc
atggccctattgacgcactcggcactgcccctcctctctggcctgcaggaaggcctctgc
tccgtgcagacggccggagagccatcttcgacgttctcttctcaggctgctgccgcgggt
gcgtcggtcaggcagatcgtcgagctcatcgagaccactctatccacgctcaacccgacg
tgggaagcggagatctccttgctcaaagagctcggcgggcagctcgacaagctcagtcgc
ctctttgattcaagctcaggcggaggcgctctggacggcacgctggcaaagatgctgggc
gagggtggagctctcgtctccggcaagcagcctgcctgggatcacttcatcgatgtcgcg
gcgctctcgcaggcaggcgagcaggcgcagcaacacccctccactcagccggaggtcgct
ctgctgcttcgccgcctggtcgactccaatatgtcctggccttgcaaaatggaagcggtc
cagatgttgcttttggcccgacgcgagcaggcggcaccctcggtgacgctcgaccagtca
ctcacggccttctacttcgagctactctcggcagccgcggaagcatgctccatcgtcgtc
gagaccccctcggctctcaaaggctcggccgagacgtactcgaccctgtggcgcaacgcc
ttgtgcggcctgatgcccgaagtgcttgcgcagatcgagcagtggctcgattcgggctgc
gcaatcgcgctgaagggcgagaggtgcatgccgccccacgcccgggtggagtcggcgctc
aaggcgctgctcatcacgtcctcggacaagctggagggctgcgaatcgaccgggacagct
gcggcggcagccacccacgacggcgacgcgaggatggacaacatgcttgattcggtcgtg
ggggccgagaccccgacgcatcagccggtgcgggcctggctgctccgatcgttgatcgag
agcgcccttgcccggccagaggcgatcacggacgaattcccgggaggccacaagctggcg
gaagaggtgcagtcgctcagccagtctctccgcatggatgctcagctcgaagggctcgac
atcgcatcgtctctggagaacaagctggcgtccgacgacctgaccgaacttctcgacaag
gtctgtcgcgacccaggcgtacaccacgccttctcgcagcagctgttgcagcagctccac
tactggctcgaggcgcaggactacgactcggtctcgcgctgctgcaaggcgcttctggcc
aacctgccggccctcgacaccctgacgctctactttgatccggccgagctcgccactatg
ctggcgtcgctgctggatcgaggcgatgtcggccaagcgagcgatgagccatcgacgctg
tgcaacatcctcttgctccttcagctcgtctgtcagcggtacagcgtcgcagccgacgcc
gtggtcccgtcggacaacagagactctttcttcgcccgtttccttcgggcgtcgtccgtc
gtctaccggctcgcggacctggcgcccgacgaacgctcgctcgtcggcaggtggatatcg
gcgctgtttgacaacgagggtatctcggacgagctcacacgcgactcttctccgcgagca
ttgctgcggctcgccccgaccctcttctcgcagtcgatcaatgcgtgcaattcgggcatc
atcgatcttgaaaccctgcgcggcggcctttcgtacttcctgcaggatctgctgagctac
accttgccggcggcgatgcggtggcttctgcaagaggtgcagcgcgtgccgctgctcccg
ctcctgtctcggtcgtcgacgtcggaagaggtcctgctcagcagcggcctcggcagggat
gcgacgtcgaggaccgtccacctggccgtcgtacagctcatcctcggctctgagacatgc
ccgccggcggtgcgccacactgtcgccgccgattttgagcgcttcctcgctcagcctgac
ctggccaggtccctaaagggaaccgacggcttcgaccttggctcgctcaaatccgggatg
gaaggtttcggcatgacgtctggcggtctggccaaggcttccgtctggttgaggacgcaa
ctgggatctctagcgacgtcgaggctgctgctgaccgtcgagcctgccagctctttgcag
cagtggggcgccgaggctgcggcgtcaggggtcttgcagcagatgggcgcaaacaggagc
gccgagagcatccaagcgctgtccatgctcctcgcccttgcgtcgaccggcgatgccaag
gcgattccctacgcttcggtcatacctctgctcgctgtgctgcagcacgtcgacctcggt
gcggtagaggacaaggagagcgtcgtggcggttgcccaggtggtcggactctcgatggtg
ctgctgcgcagcctcgcctcggtccagacgacgcgagtgacggacatggaggcgatggtg
gacgccggggagccagccgtgccattgtcgacgcagtcgccgacgcccgcgagccggatc
gtcgaccagctggcgagcctcgtgatgctcaagctcgcgcggctgtcccagtcgaggggc
gacctgtgcaaggcctttgtggatgcgctgcgcaacgccaaggccgaggtcgaggagcca
gcgttgcagccggtgctgcgcgtcctcgagacggtggcgccgctggtcgtcggccaggtc
tcgcaaccggcctcgagccgtacggcggtcacggcatcatga
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