Pseudozyma flocculosa: PFL1_01335
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Entry
PFL1_01335 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_01335
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFL1_01335
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
90S particles
Helicases
PFL1_01335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
GPIID_WHD
Motif
Other DBs
NCBI-GeneID:
19315460
NCBI-ProteinID:
XP_007877028
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MTSLDGSLKRKRGAPAPQKSRSRGARQVKRQFYDDDIDSLTHQAAAFVEPPNFRKFEQLP
ISSQTKKGLKKAGFTDMTDIQSKSLPLSLRGSDVLGAARTGSGKTLAFLVPVLEILYRNR
WGPTDGLGALVISPTRELAIQIFEVLRKIGPFHSFSAGLVIGGKDLKQEKDRLSRMNILV
ATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPKQRQTMLFSAT
QTKRVKDLARLSLKDPEYVAVQEADNESSTPRNLEQHYMVVDLDKKLDVLYSFIRTHTKC
KALVFMSSCRQVQFVHETFCKLRPGTSLMCLHGKQKQAKRLQIFSEFTRTKHAVLFATDI
AARGLDFPAVDWVIQLDVPEDIDTYIHRVGRTARYNAKGNSLLFVLPSEEKGVLESLSTK
NVPVGRIKPKESKTQSIRDQLQSFAFQDPQIKHLAQKAFVSYVRSVHLQKDKAIFDVTAL
PLEDFAEALGLPGMPKVKFVKEAEKAKRAAQQKATKEARKASAPGAEHEVDDDDKPAKVR
TKYDRMFERKNQDILSEHYSRLIAKDDASSGSGSDSDTESGSQGGHGSVDDSEADPDSDL
EESRYGKARRRPDKLVGDTSDSDSEDDEAADGRAASKRKDSERGADDDFLTLKRANHALG
DDDDDDNDDNDGLVKIDSLDKITADSTNNLSKRKLAMGQSKKALALAGKRGISEKLLFDD
EGNAHALYELQGEEDFQKQGDARTQALRWELEERQRMEEADVEDKERAKEKRREKRQRQK
ERERALERGDDVDSDDGDDSEGQDHAREVLAPLDNRSDGYETPDFDIGSESEEDDQDSAE
DHNGPRGGPAPPAKRAKHALGPRIEAETKSQVEREEELALQLLAGGAP
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcctcgacggctcgctcaaacgcaagcgcggcgcacccgcgccccaaaagtcg
cgctcgcgcggggcgaggcaggtaaagaggcagttctacgacgatgacatcgacagcctc
acccaccaggcagccgcctttgtcgagccacccaatttccgcaaattcgagcagctcccc
atctcttcgcagaccaaaaaaggcctcaaaaaggccggcttcaccgacatgaccgacatc
cagtcaaagtctctacccctttctcttcgtggcagcgacgtgctcggcgcagctcgcacc
ggctccggaaagactcttgcgtttctcgtgcctgtcctcgagatcctctatcgcaacagg
tgggggcccaccgacggcctgggagccctcgtcatctcgcccacccgcgagctcgccatt
cagatctttgaggtcctccgcaagattggcccttttcactccttctcggccggcctcgtc
atcggcggcaaggacctcaagcaggaaaaggaccgcctctcgaggatgaacatcctcgtt
gccaccccgggtcgcctgctgcagcacatggaccagaccttgggcttcgatacctccaat
gtacaggtccttgtcctcgacgaggccgatcgcatcctcgacatgggcttctccaggacg
ctcaacgccatcgtcgagaacctgcccaaacagcgtcagacgatgctcttttccgcaacg
cagaccaaacgcgtaaaggatctcgccaggctcagcctcaaggatccagaatacgtcgca
gtccaggaggccgacaacgagagctccaccccgcgcaacctcgaacagcactacatggtc
gtcgacctcgacaagaagctcgacgtgctctactcgttcatccgcacccacacaaagtgc
aaggcgctcgtcttcatgagctcgtgccgacaggtccagtttgtccacgagaccttttgc
aagctccggccgggcaccagccttatgtgtctgcacggcaagcagaaacaggccaagcgc
ctgcagatcttcagcgagttcacgcggaccaaacacgccgtgctcttcgccaccgacatt
gccgctcgaggtctcgacttcccagccgtggactgggtcatccagctcgacgtgcccgag
gacatcgacacctacatccaccgagtaggccggaccgcgcgctacaatgcaaagggcaac
agcctcttgtttgtgctgcccagtgaggaaaagggcgtgctcgagagcctctcgaccaag
aacgtgcccgtcggccgcatcaagcccaaggagagcaagacgcaaagcatccgcgatcag
ctgcagtcgttcgccttccaggatccgcagattaagcatctcgcccagaaagcgttcgtc
tcctacgtccggtccgtccacctgcagaaagacaaagccattttcgacgtcaccgcgctg
cccctcgaggacttcgccgaagcactcggcctgcctggcatgccaaaagtcaagtttgtc
aaagaagccgaaaaggcgaaacgagctgcccaacagaaggcgaccaaggaggcgcgcaaa
gcctcagccccaggggcagagcacgaggttgacgatgacgacaagccggcaaaggtcagg
accaagtacgaccgcatgtttgagaggaagaaccaggacatcctcagcgagcactactcc
agactcatcgccaaggacgacgcgagcagtgggtcaggctccgattcggacacggagtct
ggatcgcagggcggccacggcagcgtcgacgactccgaagcggaccccgacagcgatctg
gaggagagccgctatggcaaggctcggcgtcgcccggacaagctcgtcggagacacgtcc
gattctgactccgaggatgacgaggccgctgatggccgcgctgcgtccaagcgtaaggat
tcggaacgtggggccgacgacgacttcctcactttgaagcgtgccaatcacgcgctcggc
gatgacgacgacgacgacaacgacgacaacgatgggctcgtcaagatcgactcgctggac
aagattacggcggactccaccaacaacctctccaagcggaagctggccatggggcagagc
aagaaggcgctagctcttgctggcaagcgcggcatcagcgagaagctcttgttcgatgac
gaaggcaacgcccacgcgctctacgagctgcaaggcgaagaggacttccagaagcaaggc
gatgcccgcacgcaggctctgagatgggagctcgaggaaagacagaggatggaggaggcc
gatgtcgaggacaaggagcgagccaaggagaagcgaagagaaaagcgtcagaggcaaaaa
gagcgcgaaagggccctcgagcgcggcgacgacgtcgacagcgacgacggcgacgacagc
gagggccaggaccatgcgagagaggtactcgcgccgttggacaaccgatcggacggctac
gagacccccgacttcgacatcggttccgaatccgaggaggacgaccaagacagcgccgag
gaccacaacggaccccgcggtggcccggctcctcctgcaaagagggccaagcacgcgctc
ggtccccgcatcgaggccgagacaaagagccaggtcgaacgcgaggaagagctcgctctc
cagttgctggcaggcggtgctccgtaa
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integrated database retrieval system
