Pseudozyma flocculosa: PFL1_01347
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Entry
PFL1_01347 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
PFL1_01347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_01347
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PFL1_01347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
EF-1_beta_acid
Motif
Other DBs
NCBI-GeneID:
19315472
NCBI-ProteinID:
XP_007877040
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MSSSSGSRGIAASSTSTSSSSSSSRKRELIDRVRYPNPIPLPPYAPKLVKVATDPARYAN
PHFADRLASAHPLPVLVDAHAGMPIDLARFQDLWEGDLSEVSVAPTDRLDQDSLDDADAF
LLQDFASALPAAGTAAPNGAIGIVTSLHASDDPASAATLAAALQQRHASAIGPNAKTTLA
ADDVTWLRRTEYLSAEQKRAQQAVQKPRHVEAVNTSREAQVNKIQQSFRDAQKPLDRLVH
PTKRGVTAVSSFELLPDPDTWATDYHVVRFIDPPGRIVNGVPIVDPRLDVALLRPVTVNN
EQRVSYYLPTGEDLPDDPDAPMSLLEDIALEDEKSRRLRKRRRTGKFPAAKINGADADAD
GDGEGEGASRNEVGTAYKWIRDYVPKDTAESSHDVLLLSLDDGVPDEDPDADIDPIKGAK
RSRGGPGGAGDDDDDDDLFGGDDDDEDGADGGVQTTAVPQAEHERRKRSRRSELTKGKER
DAAPDGTGATLAFKSKPKAYYHKVGMRFTLRVWRSRVAKNEKLRNKDRRYPGKWDVITLS
NRDMTEREKLRRYHLRSQVDDMGALDPYESSADEAEDDVDGDEEHEAAPVEAADAAAEGS
PNGADDAADESRRIFGDDDEDDDEEAAVAAQQQQAARRDADADADANADAEAEAEADGEN
EDEDEQTRGGARDNHDDDDDEAGSKSGNDESGRDDDGTDDEDAGSIDGDEELAALQAEAA
GAGDSGDVAADEGEGGGRRSRRSRTTASASAAAGDGDGGAEEAGGEEQAADEQTRGEDTG
MDVDEE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtcgggctccagaggcatcgccgcctcgtcgacctcgacctcgtcgtcg
tcgtcgtcgtcgcgcaagcgcgagctcatcgaccgcgtacgctaccccaaccccatcccg
ctcccgccctacgcccccaagctcgtcaaggtcgcaactgacccggcgcgctacgccaac
ccgcactttgccgaccgcctcgcctcggcccacccgctccccgtcctcgtcgacgcccat
gccggcatgcccatcgacctcgcgcgcttccaggacctctgggagggcgacctctccgaa
gtctcggtcgcacccacagacaggctcgaccaggactcgctcgacgacgcagacgccttc
ctcctccaggactttgcctcggcgctccccgccgccggcaccgccgcccccaatggcgcc
atcggcatcgtcacctcgctccacgcatccgacgaccccgcctcggcagccaccctcgcc
gccgccctccaacaacgccacgcctcggccatcgggcccaacgccaagacgacgctcgcc
gcagacgacgtcacctggctaaggcgcacagagtacctctccgccgagcagaaacgcgcc
cagcaggccgtccagaagccccgccacgtcgaggccgtcaacacctcgcgcgaggcacag
gtcaacaagatccagcagtcgttccgcgacgcccaaaagcccctcgaccgcctcgtgcac
ccgaccaagcgcggcgtcacggctgtctcgtcgttcgagctgctgcccgaccccgacacc
tgggccaccgactaccacgttgtccgcttcatcgacccgcccggccgcatcgtcaacggc
gtgcccatcgtcgacccgcgcctcgacgtcgcactcctccgacccgtcaccgtcaacaac
gagcagcgcgtctcctactacctccccaccggcgaggacctgcccgacgacccagacgcg
cccatgtcgctgctcgaggacattgcgctcgaggacgaaaagtcgaggcggctgcgcaag
cgcaggcggacgggcaagttcccagcggccaagatcaatggcgccgatgccgatgccgac
ggcgatggcgagggcgagggcgcctcgcgcaacgaggtgggcaccgcctacaagtggatc
cgcgactacgtgcccaaggacacggccgagagctcgcacgacgtgctgctcctcagcctc
gacgacggcgtgccggacgaggatccggatgccgacatcgatccgatcaaaggtgccaaa
cgatcccgcggcggtcctggtggcgctggcgacgacgatgatgacgacgacctctttggc
ggcgacgacgacgacgaggacggggcggatggcggcgtgcagacgacagcggtgccgcag
gccgagcacgagaggcggaagcggagccggaggagcgagctcaccaagggcaaggagcgc
gacgcggcgccggacggcacgggcgccacgctggcgttcaagtccaagccaaaggcgtac
taccacaaggtcgggatgcgcttcacgctgcgcgtgtggcgatcgagggtggccaagaac
gaaaagctgcgcaacaaggaccggcgctacccgggcaagtgggatgtgattacgctctcg
aaccgcgacatgacggagcgcgagaagctgcgtcgctaccacctgcgcagccaggtcgac
gacatgggcgcgctcgacccgtacgagagcagcgcagacgaggccgaagacgacgtcgac
ggcgacgaggagcacgaggcggcgccggttgaggcggccgatgcggcggccgagggctcg
cccaacggtgcggacgacgccgccgacgaatcgcgtcggatctttggagacgacgacgag
gacgacgacgaggaggcggccgtggcggcacagcagcagcaagcagcgcgacgggatgcg
gatgccgacgcagatgccaatgcggatgcggaagcggaagcggaagcggacggcgagaac
gaggacgaggacgagcagacgcgaggcggtgcgcgagacaaccatgacgacgacgacgac
gaggcggggagcaagagcggcaacgacgagagcggccgcgacgacgacgggaccgacgac
gaggatgccgggtccatcgacggcgacgaggagctcgcggcgctccaggccgaggcggcc
ggtgcgggcgattcgggcgacgtggcggccgacgagggcgaggggggaggacgccgatcc
agacgtagcaggacgacggcatccgcttcagcggcggctggcgacggtgatggcggtgca
gaggaggctggtggtgaggagcaggctgccgatgagcaaacgcgaggtgaagacacgggc
atggacgtcgacgaagagtaa
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