Pseudozyma flocculosa: PFL1_01417
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Entry
PFL1_01417 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03010
Ribosome
pfp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PFL1_01417
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PFL1_01417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pfp03011
]
PFL1_01417
04121 Ubiquitin system [BR:
pfp04121
]
PFL1_01417
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfp04147
]
PFL1_01417
Ribosome [BR:
pfp03011
]
Ribosomal proteins
Eukaryotes
Small subunit
PFL1_01417
Archaea
PFL1_01417
Ubiquitin system [BR:
pfp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
PFL1_01417
Exosome [BR:
pfp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PFL1_01417
Exosomal proteins of colorectal cancer cells
PFL1_01417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
zf-AN1
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Plexin_RBD
DUF2604
Dsc3_N
UBL_UBAC1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
19315542
NCBI-ProteinID:
XP_007877110
LinkDB
All DBs
Position
Unknown
AA seq
171 aa
AA seq
DB search
MQLRLLGLHTLAPSSSTPIMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ
RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRCQNGAGTEAQCKDAAINLVGE
CPHCSLKFCGKHRLPESHSCAKQEQVRNAAFAANKAKLESERTHATRGLAH
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccgactgctcggcctgcacactttggccccctcgtctagcacgccaatcatg
cagatctttgtcaagaccctcactggcaagaccatcacgctcgaggtcgagtcgtcggac
acgatcgacaacgtcaaggccaagatccaggacaaggagggcatccctccggaccagcag
cgcctcattttcgccggcaagcagctcgaagacgggcggacgctgagcgactacaacatc
cagaaggagtcgacgctccacctcgtcctccgcctgcgcggcggcgcaaagaagcgctgc
cagaacggcgcgggcaccgaggcccagtgcaaggatgccgccatcaacctcgtcggcgag
tgcccgcactgctcgctcaagttttgcggcaagcaccgcctccccgagagccactcgtgc
gccaagcaggagcaggtccgcaacgccgcctttgccgccaacaaggccaagctcgagagc
gagcgcacccacgccacccgcggccttgcgcattag
DBGET
integrated database retrieval system