Pseudozyma flocculosa: PFL1_01421
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Entry
PFL1_01421 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03440
Homologous recombination
pfp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFL1_01421
03460 Fanconi anemia pathway
PFL1_01421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_01421
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PFL1_01421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_8
WHD_MUS81
Motif
Other DBs
NCBI-GeneID:
19315546
NCBI-ProteinID:
XP_007877114
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MAPTPAVPPSNALWLTFIGAWRDEARERGSKAAQTFNKAYRSLAACPIPFQHPCQTTQLV
GIGPTIASRLEQELQKWCDENGETMPERPTVSAGGSARKTAKAAATSKATKTTSKADGRG
AQQAVNGGDDGDQGRDGGAGDDGDDDDDDDDDSSSNGDGDGAGAAAAGTKRSNAAKPKAA
AKKPRAPSKKAYVPQLRSGAYGLMLGLFSRTHSGVGGEEVYLSKDELIQASQPYSDSDYV
NGGGGGSRSVISASIALPHSSQAPSSRTAPKSYYSAWNSMKTLITKGYVYQTGNPPKFCL
SEQGFTVAATMAHEAGVKQADGAGRGDSSSILIDEAPPPKPGPSRLAPARRSAAASADEA
GPPTRSSGPPAFRYAYLLDGEASRLVLSRSDAAQRPSRSGAETCYRIRFPRSMSGHETAA
HFVELIEEDESADDMLTGYLREAKADPVAPGLKGSTDPVPKPASYPVLDPAPDVAPRPTT
KPASGHAVESDRPVAARFEETLSDDDIEAELARLVEGKASAAGTSKMGPQRRVPRLSSII
PAPGAESSWHSRLLPPPRTSSNQSVTPGSVGGSGSGSESTTAPELQPKASGNQESNGDDD
SDADGDAGGLVADVQLAEPDEVTVAAEESLLAPTKGAPPAIPAFDPIKMPRGSFTIHFIL
DNRERRHSRDVRGKVSLAGALEAKGVAVEVRALELGDAIWIARRKGGGGAEGDEVVLDFV
VERKRLDDLTSSILDGRWKDQKFRLSSSGLSQVVYLIEDYDVDNQMRRFGEQIQTALSST
QVVDGFFVERTAGLDASIDHLARMDRIVREMYGEAELTILPDAVVSRSTYTQLQGELRAA
RPDVTYLTTFAAYQSLNGKSASLTLRDVFGKMLLCVRGMSAEKVREVLELWQTPRELWEA
YEAIESGAGSSDAGGDGGAGGGGGGQRGSKGGAGSKRSGKGAGAGGHDAATAAGATLLSS
RVNPPEQRKKIGAALSAKTHAVFRSRSYAA
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgacgccggccgtgccgccgagcaatgcgctgtggttgacctttatcggcgct
tggcgcgacgaggcgcgcgagaggggatccaaggcggcgcagacgtttaacaaggcctac
cgctcgctggcggcatgtccgatcccgtttcagcatccgtgccagacgacacagctggtc
ggcatcggtccgacgattgcctcgaggctcgagcaggagctccagaagtggtgcgacgag
aatggcgagacgatgccagagaggcctactgtttccgccggcgggtccgccaggaagacc
gccaaggccgctgccacctccaaggccaccaagacgacatccaaggccgacggaaggggt
gcgcagcaggcggtcaatggcggcgacgacggcgaccaaggcagggacggtggcgccggc
gacgatggcgacgacgacgacgacgatgacgacgacagcagctccaacggcgacggcgat
ggagcaggagcagccgcggctgggacaaagaggtccaacgcagccaagccaaaggcagct
gcgaagaagcctcgcgcgccgtcaaagaaggcctacgtcccgcagctgcgctccggcgcc
tacggcctcatgctgggcctcttctccaggacgcacagcggtgtcggcggcgaggaagtc
tacctcagcaaggacgagctgatccaggcgtcgcagccctactcggactcggactacgtc
aacggcggcggcggcggcagccgctccgtcatcagcgcatccatcgccctgccccactcg
tcccaggccccctcgagccggacggcgccaaagtcgtactacagcgcctggaacagcatg
aagacgctcatcacaaagggctacgtctaccagacgggcaacccgcccaagttctgcctg
agcgagcaggggttcacggtcgcagcaaccatggcccacgaagccggcgtcaagcaggcg
gatggcgcgggccgcggcgacagcagcagcatcctcatcgacgaggcgccgccgcccaag
cccggtccatcgaggctcgcaccagctcgacgcagcgccgcagcttcggcggacgaggcc
ggccccccgactcgctcgtcggggccgcccgctttccgctacgcatacctgctcgacgga
gaggcgtcgagattggtcctgtcgcgctccgacgccgctcagcggccaagccgatcgggc
gccgagacgtgctaccggatccgctttccgcgcagcatgagcggccacgagactgccgcc
cacttcgtcgagctgatcgaggaggacgagagcgcggacgacatgctcacgggctacctc
agagaggccaaggccgatccagtggcgccggggctgaaaggctcgaccgatccagtcccg
aagcctgcctcttatcccgtcctcgacccggcccccgatgtggcccctcggcctacgacc
aagcccgcctctggccatgctgtggagtccgaccgcccggtcgccgcgcgcttcgaagag
accttgtcggacgacgacatcgaggccgagctggccaggctggtcgagggcaaggccagc
gcagcggggaccagcaagatgggcccacaacggcgcgtgccgcgactttcgagtatcatc
cctgcgccgggcgcagagtcaagctggcacagccgcctgcttccgccgcctcgcacgagc
agcaaccagagcgtcacgcccggaagcgtcggcggaagcggaagcggcagcgagtcgaca
acggcaccagagctccagcccaaggctagcggcaaccaagagagcaacggcgacgacgac
agcgacgctgacggcgatgccggcggcctcgttgccgacgtgcagctggccgagccggac
gaggtgactgtggcggcggaagagagcttgctggccccgaccaagggtgctccgccggcg
atcccggcgttcgatccgatcaagatgccgcggggctcgttcaccatccactttatcctc
gacaaccgcgagaggcggcactcgcgcgacgtgcgcggcaaagtgtcgctggccggcgcg
ctcgaggccaagggcgtcgcggtcgaggtgcgtgcgctggagctgggcgacgccatctgg
atcgcacggcgcaagggcggcggcggcgccgagggcgacgaggtggtgctcgactttgtc
gtggagcgcaagcggctcgatgacctgaccagcagcatcctcgacgggcggtggaaggac
caaaagttccgcctgtcgtcgtccggcctgagccaggtcgtctacctgatcgaggactac
gacgtcgacaaccagatgcggcggttcggggagcagatccagacggcgctgagcagcacg
caggtggtcgacggcttctttgtcgagcgcaccgccgggctcgacgcctcgatcgaccac
ctggcgcgcatggaccgcatcgtgcgcgaaatgtacggcgaggcggagctgacgatcctg
ccggacgccgtcgtgtcgcgctcgacgtacacgcagctgcagggcgagctgcgcgccgcg
cggcccgacgtcacctacctgacgacgtttgcggcgtaccagtcgctcaacggcaagagc
gccagcctgacgctgcgcgatgtgtttggcaagatgctgctctgcgtgcgcggcatgagc
gccgaaaaggtgcgcgaggtcctcgagctgtggcagacgccgcgcgagctgtgggaggcc
tacgaggccatcgagagcggagcgggcagcagcgatgcaggcggcgacggtggtgccggt
ggcggcggtggcggtcaaaggggatccaaaggcggcgcgggaagcaaacggagcggcaaa
ggagctggcgctggcggtcacgatgcggcgacggcggcaggagcgacgttgctctcgagc
cgcgtcaacccgcccgagcagcgcaagaagattggagcggcactgagcgccaagacgcac
gccgtcttccgcagccggtcctatgcggcctga
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integrated database retrieval system
