KEGG   Pseudozyma flocculosa: PFL1_01464
Entry
PFL1_01464        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K12587  exosome complex component MTR3
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFL1_01464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfp03019]
    PFL1_01464
Messenger RNA biogenesis [BR:pfp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PFL1_01464
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 19315589
NCBI-ProteinID: XP_007877157
LinkDB
Position
Unknown
AA seq 313 aa
MAAAFDRRRVNGPQSRPLLPALDASASTSASTSRPGPSASSTSSSTTTRPDGRTPLQHRP
IFLQTGLVPSASGSAYIETGNLKLACSVFGPRQVKGRQYAGKAELNVEVKFAPFSNRRRR
RPGKTTESATLSALVSQALLPSLRLDLLPKASLDIHILVLESDGPEESCVSAGTIAASTA
LASAGIEMYGIVVGAVALLPSARSSSSAAVAGGPYPLILDPTTSDLSSSNNGARGASRIL
LCGMPALSSVTCLDVRGGALDPASQVGLQDERLQEALATMSASLNDIHGVVARALAHDFE
RRRAVLDQPAPST
NT seq 942 nt   +upstreamnt  +downstreamnt
atggccgcagcattcgacagacgccgcgtaaacggcccacagagtcgcccgctcctaccc
gccctcgacgcatccgcatcgacatcggcatccacatcccgccccggcccctctgcctcg
tcgacctcctcatccaccacgacccgccccgacggcaggacaccgttgcagcaccgtccc
atcttcctccagaccggactcgtaccctcggcgagcggcagcgcgtacatcgaaacgggc
aacctcaaactcgcctgctccgtctttggtccgcgccaggtcaaagggcgccagtacgcc
ggcaaggccgagctcaacgtcgaggtcaagtttgccccgtttagcaacagaaggaggagg
aggcctggaaagacgacggaatcagccacgctctcggccctcgtctcgcaggcgctgctt
ccctctctgcgcctcgacctgctccccaaggcctcgctcgacatccacatcctcgtcctc
gagtccgacggacccgaagagagctgcgtgagcgccggcaccattgccgcctcgacggcg
ctcgcatcggccggaatcgaaatgtacggcatcgtcgtcggtgccgtcgcgctcctcccg
tccgctcgatcgtcctcgtctgccgccgtcgccggggggccatatccgctcatcctcgat
cccaccacgtcggacctttcgtcgagcaacaacggtgcgaggggcgcatcgaggatcctg
ctctgcggcatgcccgccctctcgagcgtcacctgtctcgatgtgcgcggtggggccctc
gacccagcctcgcaggtagggttgcaggacgaaaggctgcaagaggcactggcgaccatg
tcggcatcgctcaacgacatccacggcgtcgtcgcacgagccctcgcccacgactttgaa
agacgcagggcggtcctcgaccaacctgccccctcgacctag

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