Pseudozyma flocculosa: PFL1_01476
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Entry
PFL1_01476 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFL1_01476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfp03032
]
PFL1_01476
Enzymes [BR:
pfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFL1_01476
DNA replication proteins [BR:
pfp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
PFL1_01476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
Motif
Other DBs
NCBI-GeneID:
19315601
NCBI-ProteinID:
XP_007877169
LinkDB
All DBs
Position
Unknown
AA seq
1696 aa
AA seq
DB search
MSARAKKLNALAALKAKRDGLPVPKKAGLYSDDEDDDAIYDEVSEDEYRSIVRGRMMEDD
FIEDDDGSGYVDHGQDEWAKPHGSDDDGQDTEDEQDYFERTGRKKPKRGTKARAKADAKG
ASSKATAAASKSSLSAAFTKQAAMKPAGVGRSVPAASRSNAMDAYRPAVSREKEEDFMAR
LMGNLEGSDAASASRGSGEPASPSPAARISSPSMLARKRKQDDYDDTFGRFRSSKLGSAG
GFSSPSTGPATSDSLQPSSDGVAPPSVHVTGSDTPPWGPNLGSDPPFDLGGGDDTPSSSK
KARGAARSLPRRIGSLGLDADDDKDIFADQHRRAEGVDDKVLAISDDEDGDISIRKVTVG
KAPAKTVNLLGQKAPPPQPKATPKLSRATIGDDEATPKPANKPTAPQAGGEGRIKTPNSH
WQSVHTNLLKNVTTAGMDASSSTPSRAGPSTNGATSAIKGAGPAATTPGAVAGSSNLASG
KIRAFEDDGRTLHFYWLDYLEGEKGIVYLVGKVRDRESGRFVSCCLTVNGIERCVFLLPR
ERQLENGHLTDRPVGEDDVYDEFEELSQRHGVQRFLSKWVSRKYAFEQAGVPSESHYLKV
RYGFDEPQLPFDFKGRTFSKAFGTNTSAFELLVVKRRIFGPCWLKVQNASLSTGTPVSWC
KLETTIDDPKDISPVLDTDAAAPKEMPPLTIMSLSTRSVVNHKENKRELVTVSARTWHDH
QIEDPTPPENLPCSIYTAVRPLGSMFPPGFEAEAKRGKTKVHTLKYERMLLNSLLAQIQL
TDPDVIVGHEFGGVSLDVLLHRMKELRADHWSRIGRFRRPKWPTLKQGMNLKILAGRLVC
DLTSDNAKSMIASTTWSLTEMCGTQLSIQRDDIDPDETASYFDSLAPSPERLLTFVRHCE
VDTFFQMAIAAKVQILPLTKQLTNLAGNSWNKTLNGGRAERNEYILLHDFHRQKYICPDK
IALWEKKQIAEAVAAKKAKASKQAGGGAAAAAAAATANAAATSSKKDKFKGGLVFEPKRG
LWDKFILVMDFNSLYPSIIQEFNIDFTTVERPPTQGLEDVEAEGGSGGSSRASPTAEADT
TATTNATASSASDPDQIPEVPSSDVDQGVLPRIIAGLVQRRRQVKSLMKDRTATPSQLLQ
WNIKQLALKLTANSMYGCLGFENSRFYARPLAALTTFKGREILTATKELAESMLLDVIYG
DTDSVMINTNATEYRDAIKIGHEFRKAVNERYRLLEIDIDGVFERMLLLQKKKYAAVLVD
DAGRKTTEIKGLDMKRREYSALSKTVSNYVLSQILSGSATETVVEQIHDYLSEMGQQIRT
GQIALDDFIIYKRLGKNPEDYPDSKSQPHVQVALRLKARGGSARMGDVIPYIFCLGEDGT
SSTKTAQAERAHHPDELRKKDTELRIDYEHYLALQILPPVERLCESIEGTDRSRLAECLG
LDPSKYATVSAGGGGGGGAGLDRDFVTLDSQIPDEVRFADCKPLVLRCPSCRQASTFFGP
IHIPKRPADGSAHTTEVNAIGRDGIRCTQPECLQPLPMASILIQLELAIRSFISRYYAGW
TECNDPQCGARTRMASVYPRRCLAVRDANRPSTDLEESLASSSDRQHASCKGRTELMYRD
KQLYNQLLYLESLVDGERIRERAKTLTVRGKEDEALATLDRNAAELWAMRETVSKYLDKN
GRRYVKLSGLFRFMKV
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgagagcaaagaagctcaacgccctcgcagcactcaaggcgaagcgagacggc
ctccccgtcccaaagaaggccggcctgtactcggacgatgaagacgacgatgccatctac
gacgaggtctcagaggatgagtaccgctccatcgtccgcggcaggatgatggaggacgac
ttcatcgaagacgacgacggcagcggctacgtcgaccacggccaggacgagtgggcaaag
ccacacggctcggacgacgacggccaagacacagaggacgaacaggactactttgagcgc
accggccggaaaaagccaaagcgcggcacaaaggcacgggcaaaggcagacgccaagggc
gcaagctccaaggccaccgcagcagcctcgaaatccagcctatcggccgccttcaccaaa
caggccgccatgaagccagccggcgtcggtcgctctgtccctgccgcctcgcgcagcaat
gccatggacgcctaccgccccgccgtcagcagggaaaaggaggaggacttcatggcgcgg
ctcatgggcaacctcgagggctcggacgcggcatccgcctctcgcggcagcggcgagccc
gccagcccatctccggcagctcgcatctcgtctccatcgatgctggcgcgcaagcgcaag
caggacgactacgacgacacatttggtcgcttccggtcctcgaagctcggcagcgccggc
ggcttctccagcccttcgactggtccggctaccagcgactcgctccagccctcgagcgac
ggcgttgcgccccccagcgtccacgttaccggcagcgacacgccgccgtggggcccgaac
ctcggcagcgaccctccattcgacctcggcggcggcgacgacacgccatcttcgagcaag
aaggcgcgcggggcggccaggagcctgccccgccgcatcggctcgctcggcctcgatgcc
gacgacgacaaggacatctttgccgaccagcacaggcgggccgagggcgtcgacgacaag
gttcttgccatcagcgacgacgaggacggcgacatctcgatccgcaaggtgacggtgggc
aaggcgcccgccaagaccgtcaacctgctcggccagaaggcgccgcctccgcagcccaag
gccacgccgaagctaagccgggccactattggggacgatgaggcgacgcccaagcccgcc
aacaagcccaccgcaccacaagcgggcggagagggcagaatcaagacgcccaacagccat
tggcagtcggtccacacgaacctgctcaagaatgtcacaaccgccgggatggatgcttcg
tcatcgacgccgagcagagccgggccttctaccaacggcgccacctctgctatcaaggga
gctggtccagccgctacgacccccggcgccgtcgcgggcagctccaaccttgcctccggc
aagatccgcgcatttgaggatgacggccggacgctccacttctactggctcgactacctc
gagggcgaaaagggcatcgtctacctcgtgggcaaggtgcgggatcgcgagagcggacgc
ttcgtcagctgctgcctcaccgtcaacggcatcgagcgctgcgtcttcctgctgccgcgc
gagaggcagctcgagaacggccacctcaccgaccgccccgtcggcgaagacgacgtctac
gacgagttcgaggagctctcgcagcgccacggcgtccagcgcttcctgtccaagtgggtc
agccgcaagtacgcgttcgagcaggccggcgtgccgtccgagtcgcactacctcaaggtg
cgctatggcttcgatgagccgcagctgccgtttgacttcaaaggccgcaccttctccaag
gcgtttggcaccaacacttctgcctttgagctgctggtggtcaagcggcgcatcttcgga
ccgtgctggctcaaggtgcagaacgccagtctcagcacgggcacgcccgtgtcgtggtgc
aagctcgagacgaccatcgacgaccccaaggacatcagccccgtgctcgacacggacgcg
gccgcccccaaggagatgccgccgctgaccatcatgtcgctgtcgacgcgcagcgtggtc
aaccacaaggagaataaacgcgagctggtcacggtcagcgcgcgcacttggcacgaccac
cagatcgaggacccaaccccgcccgagaatctgccctgctcgatctacacggcggtgcga
cctctcggcagcatgttcccgcccggctttgaggccgaggccaagcggggcaagaccaag
gtgcacactctcaagtacgagcgcatgctgctcaacagcctgctggcccagatccagctg
acggatccggacgtcatcgtgggccacgagtttggtggcgtctcgctcgacgtgctgctg
caccgcatgaaggagctgcgggccgaccactggagccggatcggccgcttccgccggccc
aagtggcctacgcttaagcagggcatgaacctcaagatcctcgcaggccggctggtgtgc
gacctgacgtcggacaatgccaagagcatgattgcctcgacgacctggtcgctgaccgag
atgtgcggcacccagctcagcatccagcgcgacgacatcgacccggacgagacggcgtcg
tactttgactcgctcgccccctcgcccgagcggctgctgaccttcgtgcgccactgcgag
gtcgacacctttttccagatggccatcgccgctaaggtgcagatcctcccgctcacaaag
cagcttaccaacctcgccggcaacagctggaacaagacgctcaacggcggtcgtgccgaa
cgcaacgagtacatcctgctccacgacttccatcgccagaagtacatctgccctgacaag
attgcgctgtgggagaagaagcagatcgccgaggcggtcgccgccaagaaggccaaggcc
tccaagcaggccggaggcggcgcagcggcagcggcggcagcagcaacggccaacgccgcg
gcgacctcgagcaagaaggacaagttcaagggcggtctcgtgttcgagccgaagcgtgga
ctctgggacaagttcatcctcgtcatggacttcaactcgctctacccctcgatcatccag
gagttcaacatcgacttcaccaccgtcgagcgaccgccgacgcagggcctagaggacgtc
gaggccgagggcggcagcggcggcagctccagggcctcgccgacggccgaagcggacacc
actgccaccacaaacgccaccgcctcttccgccagcgatccggaccagatccctgaggtg
ccgtcttcagatgtcgaccagggcgtgcttccacgcatcatcgctggccttgtgcagcga
cgtcggcaggtcaagtcgctgatgaaggaccgcacggcgacgccgtcgcagctgctgcag
tggaacatcaagcagctcgcgctcaagctgacggccaactcgatgtacggctgcctcggc
tttgagaattcgcgcttctacgctcgcccgctggcggcgctgacgacgttcaagggccga
gagatcctgacggccacaaaggagctggccgagtcgatgctgctggatgtcatctacggc
gacactgactcggtcatgatcaacaccaacgccaccgagtaccgcgacgccatcaagatc
ggccacgagttccgcaaggccgtcaacgagcgctaccgcctgctcgagattgacatcgac
ggcgtcttcgagcgtatgctcttgttgcagaagaagaagtacgccgccgtcctcgtcgac
gacgccgggcgcaagacgaccgagatcaagggcctcgacatgaagcgccgcgagtactcg
gccctaagcaagacggtctccaactacgtcctcagccagatcctctcgggcagcgccacc
gagaccgtcgtcgaacagatccacgactacctctccgagatgggccaacagatccgcacc
ggccagatcgccctcgacgacttcatcatctacaagcgcctgggcaagaaccccgaggac
tacccagacagcaaatcccagccgcacgttcaggtggcgctgcggctcaaggccagaggc
ggcagcgcgcggatgggcgacgtcatcccctacatcttttgcctgggcgaggacggcacc
agctccaccaagacggcccaggccgagcgggcccaccacccggacgagctgcgcaaaaag
gacaccgagttgcggatcgactacgagcactacctggcgctccagatcctcccgcccgtc
gagcgtctttgcgagtctatcgagggcaccgatcggtcgcgcttagccgagtgcctcggc
ctcgatccgtccaagtacgccacggtctcggccgggggtggcggcggtgggggcgcgggt
ctcgaccgcgactttgtcacgctcgacagccagatcccagacgaggtgcggttcgccgac
tgcaagccgctggtgctgcgctgcccgtcgtgccgccaggcttcgaccttcttcggcccg
atccatatccccaagcggccggcagacgggtcggcgcacacgaccgaggtcaacgccatc
ggccgcgacggcatccgctgcacgcagcccgagtgcctacagccgctgccgatggccagt
atcctgatccagctggagctcgcgatccgcagcttcatctcgcgttactacgcgggctgg
accgagtgcaacgacccgcagtgtggcgcgcgcacgcggatggcgtccgtctacccgcgc
cgctgcctggcggtgagggacgccaaccgcccctcgacggacctcgaagagtcgctggcg
tcatcgtcggaccgccagcacgccagctgcaagggccggaccgagctcatgtaccgcgac
aagcagctgtacaaccagctgctgtacctcgagagcctcgtcgacggcgagcggatccgg
gagcgagccaagacgctgacggtgcggggcaaggaggacgaggcgctggccacgctcgac
cgcaacgccgccgagctgtgggcgatgcgcgagaccgtgtccaagtacctcgacaagaac
ggccgccgctacgtcaagctgagcgggctgtttaggttcatgaaggtgtaa
DBGET
integrated database retrieval system