Pseudozyma flocculosa: PFL1_01924
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Entry
PFL1_01924 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03440
Homologous recombination
pfp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFL1_01924
03460 Fanconi anemia pathway
PFL1_01924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfp03032
]
PFL1_01924
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_01924
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFL1_01924
DNA replication proteins [BR:
pfp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
PFL1_01924
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
PFL1_01924
Bloom's syndrome complex (BTR)
PFL1_01924
FA (Fanconi anemia) pathway
PFL1_01924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
19316046
NCBI-ProteinID:
XP_007877626
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MPNRRLPKLEPGVVPVDVDAVTPKVEGAEGMRTGSPSVASGVPRRYAASSSDRLPARLTA
ASTAALDVKPPPPGSSPAITIDLDDDEDLDDDRPLHRRRPSPDQNYGNDHDDIVLIKAEN
AAAAARLVGDADRSNDSMVIPVKRDSPGPITPRGGQGHVKRPRVSAEGTLSDAASSRHGQ
RDRDEDPASSQAAPGSTSSTGRPTSDLIKRTDRDLVELLKQTKANLKRVRLELVSLVEDP
NAADEAYVRMQESFLNQRVKQIQEELDARGVDPSGHSATPLRAASPPQQAPSSGTSTGAS
ASNVFVPAARSGVDAATGHDELFRPGSISRADRPQTDSRPTDGASARCDTFAARPQGQDD
GSRRPRSPTPDFDDDAIEWNEVPDVPIAGPSRPAPMVPAAPVRAAPPPPPQDDAIDIDEF
YGDGDDIDYDDAPAEVRAQILGPSMDQLPKSKETRDQLVYPWSQEVVYALRELFQLKNFR
KHQLEAINAALSGRDVFCLMPTGGGKSLCYQIPAVVTKGRTDGVTIVISPLLSLIHDQVQ
SLVQKDIPAVALSGKMSAGDRADVFRELTKRETSIRLLYLTPEFVGKSSKATEIFGLLYR
TKRLARFVVDEAHCVSQWGHDFRPDYKDLGRLRQEYPKIPFMALTATANIRVREDVTNQL
QLDKPVALQQSFNRPNLEYHVRDKPSTKAKHLDAIAGFIKTYHAGKTGIIYCNSRKSCEE
VAHDLSEKHDIRAKHYHAHLSDADRTMIQNQWKTGEFEVVVATVAFGMGIDKPNVRFVIH
HSMPRSVEGFYQETGRAGRDGKTSVCVLYYTYNDFRQLQNQIQEDDLPRVQKDQQLENLK
EVLSYCENRTDCRKMQILRYFNETFSPANCHRSCDVCIEKDGKVVKHDFTELAKVAIKLV
KAILATKKRVTLIYCADVFRGARTQATREHHDPKAYFWGTGAHLSNDQCRRLFQRLQALN
ALEDETRSIGGYTQFYLKLGPRAKDVLNGSLKVELEIRPEKAGKGTAAAVATTTAATKRS
TGRPIAATRPVAVSDFEFADDAHDISNVPLSPDKARAPRNADRAKRAPLSRNVVNTRSAV
GSGSGSADRTREERDVSQQCYEALAKLRSETIEKLGCAESEVFTDEQLQVLSAMLPRDDM
TLRDAIGITGPKRYVRSSDFLAVCIDYRQKQDRLGGKAAAPRAAAVGATAKGAIDLSSFS
YNDPSPPRSKSGASGPTAAAASRRAPPTSSSSTARPGAGASSRASTSRSAAGTAASVIRP
MPILPRR
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaccgcagactgccgaagctcgaaccaggggtagtgccggtcgatgtcgatgcg
gtaacgccgaaggtggaaggagcagaaggaatgcgcactggctcgccatcggtagcgtcg
ggtgtgccgaggcggtacgccgcatcctcttcggatcggctgccggccaggctgacagca
gcatcgaccgctgctctcgacgtcaaaccgccacctcctggctccagccccgccatcacc
atcgaccttgacgacgacgaagacctggacgacgaccggcccttgcaccgtcgccgcccc
tctccagaccagaactacggcaacgaccacgacgatattgtcctgatcaaggccgagaac
gcagctgcagcggccaggcttgtgggagacgccgaccgatcaaacgactccatggtcatc
cctgtcaagcgcgactcgcccgggcccatcacgccgcgaggcggccaaggccatgtcaag
cgccctagggtgtctgcagaggggacgctctcggacgccgcctcgtctcgacacggccag
agagaccgagacgaggatcccgcctcgtcccaggcagcgcccggctcgaccagcagcacc
ggtcggcccaccagcgacctcatcaagaggacggatcgggacctggtcgagctgctgaag
cagaccaaggccaacctgaagagggtgcggctggagctcgtcagcctggtcgaggacccg
aacgcggccgatgaggcgtacgtgaggatgcaggagagcttcctcaaccagagggtcaag
cagattcaagaggagctggatgccaggggcgtcgatccgtccggccactcagcgacgccg
ctccgagctgcctcgccgccgcagcaggctccgtcttcagggaccagcaccggcgcctcg
gccagcaacgtatttgtgcccgctgcccgctcgggggtagacgcggctaccgggcacgac
gagctatttcggcctgggtcgatcagccgggccgatcgtccgcagaccgactcgcgaccg
accgacggggcatcggctcgctgcgacacgttcgcggcccgacctcagggccaggacgat
ggctcccgccgaccgcgctcgcccacgcccgactttgacgacgatgcgatcgagtggaac
gaggtgcccgacgtgccaatcgccggaccctcgcggcctgcgcccatggtacctgcggcg
cccgtccgggctgccccgccgccgccgccgcaggacgacgccatcgacatcgacgagttc
tatggcgatggcgatgacatcgactacgacgatgcgcccgccgaggtgcgggctcagatc
ctcggcccgtcgatggaccagctgcccaagtccaaggagacccgagaccagctcgtgtac
ccgtggtcgcaggaggtcgtgtacgcgctgcgcgagctgttccagttgaaaaatttccgc
aagcaccagctcgaggcgatcaacgcggcgctgagcgggcgggacgtcttctgcctaatg
ccgaccggcggaggcaagagcctctgctaccagatccccgcggtcgtcacaaagggcagg
acggacggcgtcacgatcgtcatctcgcccctgctctcgctgatccacgaccaggtgcag
tcgctcgtccagaaggacattcctgccgtcgcgctgagcggcaagatgtcggccggggac
cgtgcggatgtcttccgcgagctgacaaagcgcgagacgtcaatccgcctgctctacctc
acgcccgaattcgtcggcaagtcgtcgaaggctaccgagatctttggcctcctctaccgc
accaaacgcctcgcccgcttcgtcgtcgacgaggcgcactgcgtcagccagtggggccac
gacttccggccggactacaaagacctgggcaggctgcggcaagagtaccccaagatcccc
ttcatggcgctgactgcgacggccaacatccgcgtgcgcgaggacgtcaccaaccagctc
cagctcgacaagcccgtcgcccttcagcagtcgttcaaccggcccaacctcgagtaccac
gtgcgcgacaagccgagcaccaaggccaagcacctcgatgcgatcgccggcttcatcaag
acgtaccacgccggcaagacgggcatcatttactgcaacagtcgcaagtcgtgcgaggag
gtggcccacgacctgtcggaaaagcacgacatccgcgccaagcactaccacgcccacctc
tcggacgccgatcgcaccatgatccagaaccagtggaagacgggcgagtttgaggtggtc
gtcgccaccgtggcctttggcatgggcatcgacaagcccaatgtgcgcttcgtcatccac
cactcgatgccgcgctcggtcgagggcttctaccaggagactggcagggcggggcgcgac
ggcaagacgtcggtctgcgtgctctactacacgtacaacgacttccggcagctgcagaac
cagatccaggaggacgacctgccgcgcgttcaaaaggaccagcagctcgagaacctcaag
gaggtgctcagctactgcgagaaccgcaccgactgccgcaagatgcagatcctgcgctac
tttaacgagaccttctcgcccgccaactgccaccgcagctgcgacgtctgcatcgaaaag
gacggcaaggtcgtcaagcacgactttaccgagctggccaaggtggccatcaagctggtc
aaggccatcctcgccacaaagaagcgcgtcacgctcatctactgcgccgacgtcttccgc
ggcgcgaggacccaggccacccgggagcaccacgaccccaaggcctacttctggggcacc
ggcgcccacctctccaacgaccagtgccgtcgcctcttccagcgcctacaggccctcaac
gcgctcgaggacgagacccgcagcatcggcgggtacacgcagttctacctcaagctgggt
ccgagggccaaggacgtgcttaacggctcgctcaaggtcgagctcgagatccgcccagag
aaggcgggcaagggcaccgcggcagcggtagcgaccacgacggcggcgacgaaacggtcc
actggcaggcctatcgccgccaccaggccggtggccgtcagcgactttgagtttgccgac
gacgcccacgacatcagcaacgtgcccctcagcccggataaggcgagggcgccgcgcaac
gctgacagggccaagcgcgcgccactcagccgcaacgtcgtcaacacccgctcggccgtc
ggcagcggcagcggctccgccgaccggaccagggaggagcgggatgtgtcgcagcagtgc
tacgaggcgctggccaagctgcgcagcgagacgatcgagaagctcgggtgcgccgagtcg
gaagtcttcaccgacgagcagctccaagtcctcagcgctatgctgccgcgcgacgacatg
acgctgcgcgacgccatcggcatcaccgggcccaagaggtacgtgcggtcctctgacttc
ctcgccgtctgcatcgactaccggcagaagcaggaccgcctcggcggcaaggcagccgca
ccgcgagcggcagcggtcggcgcgacggccaagggcgccatcgatctgtcgtcgttctcg
tacaacgaccccagcccgccaaggagcaagagcggcgcgtcgggccccacggcggcggcg
gcgagcaggcgtgcgcccccaacctcttcgtcgtctacggcgcggccgggtgccggggcg
tcctcgcgggcctcgacttcgagatcggcagcaggtaccgcggcgtccgttattcgcccc
atgcccatccttccgcgacgctga
DBGET
integrated database retrieval system
