Pseudozyma flocculosa: PFL1_02104
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Entry
PFL1_02104 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFL1_02104
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfp01007
]
PFL1_02104
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfp03016
]
PFL1_02104
Enzymes [BR:
pfp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
PFL1_02104
Amino acid related enzymes [BR:
pfp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFL1_02104
Transfer RNA biogenesis [BR:
pfp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PFL1_02104
Prokaryotic type
PFL1_02104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
APG6_N
DUF4685
Motif
Other DBs
NCBI-GeneID:
19316226
NCBI-ProteinID:
XP_007877806
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MSSQASPELAAQIASLQKARDEQAAKVSQLKSQKAESAAIKAEVDVLLALKKQLEGLGIV
DPRSVSSSSKKAGGSANKSASAAASSSSSKGAAPVAYTLKTPKGTRDWEPLAMSLRKKIF
STIEEVFSSHGAVTIDTPVFELKEILSGKYGEDSKLIYDLQDQGGELCSLRYDLTVPFAR
FVAMNQTEYGNIKRYHIAKVYRRDQPAMSKGRFREFYQCDFDIAGVYDPMLPDSEILCIL
VEALDALGIDGFTIKLNHRKILDGIFDVCGVPADKIRTISSAVDKLDKSPWSEVRREMVV
DKGLDEAVADKIGEYVKHRGGRDLLERLEHDAVLSAHPTASQGLKDMALLFDFLDVYGIT
DRMSFDLSLARGLDYYTGIIYEAVTAASAPPGFAGKDGGAPSAAVAAGGEADKPKKAAAA
AAKSGGDDEVDESTVGVGSIAAGGRYDNLVGMFSGSKKPDAVPCVGVSIGVERVFAIMMQ
RLREREAKGERTGVRSKDVEVYVMSVGDGLLKERMSVAKLLWNAGIKAEFMYKNKPKLPA
QFSAVEKEGIPYAVMLAPAEWNAESGRTVRVKQQKGKDSAEGQSQGDVVALDDLVDYLKR
VGAGRNAVALKDRTRIV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccaagcatcccccgagctggccgcgcagatcgcctcgctccaaaaggcgcga
gacgagcaggccgccaaggtcagccagctcaagtcgcaaaaggcagagtcggccgccatc
aaggctgaggtcgacgtcctcctcgccctcaaaaagcagctcgagggcctcggcatcgtg
gaccccaggtccgtctcgtcgtcgagcaaaaaggcgggcggatccgcaaacaagtcggca
tccgccgcagcctcgtcgtcgtcgtccaagggcgccgcacccgtcgcctacacgctcaag
acgccaaagggcacccgcgactgggagcccctcgccatgtcgctccgcaaaaagatcttc
agcaccatcgaggaggtctttagcagccacggcgcagtcaccatcgacacgcccgtcttc
gagctcaaggagatcctctcgggcaagtacggcgaggacagcaagctcatctacgacctc
caggaccagggcggcgagctctgcagcctccgctacgacctcaccgtcccctttgcccgc
ttcgtcgccatgaaccagaccgagtacggaaacatcaagcgctaccacatcgccaaggtc
taccgccgcgaccagcccgccatgtcaaagggccgcttccgcgaattctaccagtgcgac
tttgacatcgccggcgtctacgaccccatgctccccgactcggagatcctctgcatcctc
gtcgaggccctcgacgccctcggcatcgacggcttcaccatcaagctcaaccaccgcaag
atcctcgacggcatctttgacgtctgcggcgtccccgccgacaagatccgcaccatctcg
agcgccgtcgacaagctcgacaagtcgccctggtccgaggtgaggcgcgagatggtcgtc
gacaagggcctcgacgaggccgtcgccgacaagatcggagagtacgtcaagcaccgcggc
ggccgcgacctcctcgagcgcctcgagcacgacgccgtcctctcggcccacccgaccgcc
tcccagggcctcaaggacatggcgctcctctttgacttcctcgacgtctacggcatcacc
gaccgcatgagcttcgacctcagcctcgcccgcggcctcgactactacacgggcatcatc
tacgaggccgtcaccgccgcctcggcgccgccgggctttgccggcaaggacggtggtgcc
ccgtcggcagcggtggcggcgggaggcgaggccgacaagcccaagaaggcggcggcggcg
gcggccaagagcggtggcgacgacgaggtcgacgagtcgacggtgggcgtgggctcgatt
gccgccggcggccggtacgacaacctggtgggcatgtttagcggcagcaagaagcccgac
gcggtgccgtgcgtgggcgtgtcgattggcgtcgagcgcgtatttgccatcatgatgcag
cggctgcgcgagcgcgaggcaaagggcgagcgcaccggcgtccgctcaaaggacgtcgag
gtgtacgtcatgagcgtcggcgacggcctgctcaaggagcgcatgagcgtcgccaagctc
ctctggaacgccggcatcaaggccgagttcatgtacaagaacaagcccaagctgccggcg
cagttttcggccgtggaaaaggaggggatcccgtacgccgtgatgctggcgccggccgag
tggaacgccgagtcggggagaacggtgcgggtcaagcagcaaaagggcaaggactcggcc
gaggggcagagccagggcgacgtcgtggcgctcgatgacctcgtcgactacctcaagcgc
gtcggcgccggccgcaacgccgtcgcgctcaaggaccggacccgcatcgtctag
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