Pseudozyma flocculosa: PFL1_02172
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Entry
PFL1_02172 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfp03016
]
PFL1_02172
Enzymes [BR:
pfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PFL1_02172
Transfer RNA biogenesis [BR:
pfp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PFL1_02172
Prokaryotic type
PFL1_02172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPK_catalytic
TPK_B1_binding
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
LssY_C
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
19316293
NCBI-ProteinID:
XP_007877876
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MAPPRISLKFLGTSSMPNATRNYSSLLVKVDNHTVMVDCGESTQRQFQARYIGGDEKMAN
LKTILVTHLHADHVLGIVPLLMSMMGPSGTAASASDAPRVEIFGPRGLRALIRTTLTLCY
SKLSGKYVVHELTWPRPDTHTSASGGSIPTSLLDEPDRPIPALPPHESELPGRDIPMELG
PAAWTRFTSFKAHGQCPRVHISAAPITHRCPTLGYTFEEEWATSPLDAAVPELLKANAQA
LLDERNIRNPLSLLPRLTQQRESILLPDGTMLHPPPLDLPGRKVTVLGDTSDATGGLLDG
LAGTEAKARGMAALARGSDVLVHESTNIALPAALTRDGKAESRPQAMVKAAERGHSTPQG
AGAFAALVRAGCLILNHFSVRYPAPPHYLLGKQIGGPNDDGASTTASGTERNGSGPGGAG
PGAASKQGPRQLGEPERRSLVMREFESQAAESWRAAAAAGEGGSGGAMTTDADVQPGFEV
KAAYDGFVYDVPPRPRVASRHVPFSRPGETWHADPPHPAAFSTASYARRSSKKASARAVV
ATTPAAAKYQSRDGDWDPSPYLLDDVTRREAHAVVLLNSPIGDVQKRHLVRIWETAKYRL
CADGAANRLVEAFGYDCFVKGTRDQMPLPHAIVGDLDSVRPEVKSFFAEQGVEILLRPSQ
YATDLQKCIQAVEDHEASAAGDGARSSELVLLIFGGLSGRFDQSVHTLHVLWQLAPGAAD
LGGVEDPSETEAAASDGRGGKLRKRRRTYVVGDGSMAWLLSPGKHRLRMSRAVMGKTCGL
LPLGVGNAGARISTKGLEWDLEGEPPSTLGGFLSTSNHLAHPDGEVEVETDQPVYWTVEL
KQQAGVLEEEE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgccacgcatatccctcaagttcctcggcacgtcgtcgatgccgaatgccact
cgcaactactcgagtctgctggtcaaggtcgacaaccacaccgtcatggtcgactgcggc
gaatcgacgcagcgtcaattccaggcccgttacatcggcggagacgaaaagatggcaaac
ctaaagactatcctcgtcacccatctccatgctgatcacgtgctcggcattgtgccgctc
ctcatgtccatgatgggtccctcgggcaccgctgccagcgccagcgacgctcctagggtc
gagatcttcggtcctcgcggcctgcgcgccctcatacgcaccacactgacgctgtgctac
tccaagctgagcggaaagtatgtcgtgcacgagctcacctggcctcggcccgacacccac
accagcgctagcggcggctccatcccgacatccctgctcgacgagccagatcgaccgatc
cccgccctcccgccgcacgagagcgagttgcccggccgcgacatcccgatggagctgggt
ccagccgcctggacccgcttcaccagcttcaaggcgcacggccagtgcccgcgggtgcac
atcagcgctgcgcccatcactcaccgctgcccgacgctcgggtacacgtttgaagaggag
tgggccacgtcgccgctcgacgccgccgtcccggagctgctcaaggccaacgctcaggcg
ctcctcgacgagcgcaacatccgcaacccgctctcgctcctcccacgcctcacccagcaa
cgcgagtcgatcctcctgccggacggaaccatgctccacccgccgcccctcgatctgccc
ggtcgcaaggtcaccgtcctgggcgacacgtcggacgccacgggcggactcctcgacggc
ctcgcgggaaccgaggcaaaggcacgcggcatggcggcgcttgcacgcggctccgacgtg
ctcgtgcacgagtctaccaacatcgcgctgcccgctgcgcttacaagggacggcaaggcc
gagtcaagaccccaggccatggtcaaggcggctgaacgcggccactctacgccgcagggc
gccggcgcgtttgcggcactggtacgtgccggctgcctcatcctcaaccacttttcggtg
cggtacccggcaccaccacactacttgcttggcaagcagatcggcggccccaacgacgat
ggagcatcgacgaccgcgagcggaactgagcgcaacggcagtggtccaggaggcgcgggt
cccggcgcggcgagcaagcaggggccgaggcagctcggcgagcccgagcggaggagcctg
gtgatgcgcgagttcgagtcgcaggctgccgagagctggcgtgccgccgctgctgccggc
gagggcgggagcgggggcgccatgacgaccgacgccgatgtccagcccggcttcgaggtc
aaggcagcgtacgacggcttcgtctacgatgtcccgcccagaccgagggtggcgtcccgc
cacgtccccttctcgcgaccaggagagacgtggcacgccgacccgccgcaccctgccgcc
ttttcgacggcgagctacgccaggaggagcagcaagaaggcttcggccagggcggtggtc
gctaccacccctgcggcagccaagtaccagagccgagacggagactgggacccttcgccg
tacctgctcgacgatgtgacaagacgcgaggcgcacgccgtcgtgctgctcaactcgccc
atcggcgacgtgcagaagcggcatcttgtgcgcatctgggagacggccaagtaccgcctg
tgcgcggatggggcggcgaatcggctggtcgaggcgttcgggtacgactgcttcgtcaag
ggcacgcgcgaccagatgccgctgccgcacgccattgtcggcgacctcgactcggtgcgg
cccgaggtcaagtccttctttgcagaacagggcgtcgagatcctgctgcggccatcgcag
tatgcgaccgatctgcaaaagtgcatccaggccgtcgaggaccacgaggcaagcgcagcc
ggggacggcgcgaggagctcagagctggtgctgctcatctttggcgggctctctggccgt
ttcgaccagagcgtgcacacgctgcacgtgctgtggcagctggcaccgggtgctgcggat
ctgggaggcgtcgaggacccgagcgagaccgaggcggcggcgagcgacgggcgcggaggc
aagctgcggaagcggcggcggacgtacgtggtgggcgacggcagcatggcgtggctgctg
tcgccgggcaaacaccggctgcggatgtcgagggcggtgatgggcaagacatgcggcctc
ctccccctcggcgtaggcaacgccggtgcaagaatctcgacaaaagggctcgaatgggac
ctcgagggcgagccgccatcgacgctgggcggcttcctgtcgacgtccaaccacctcgcc
cacccagacggcgaggtcgaggtcgagacagaccaacccgtctactggaccgtcgagctc
aagcagcaggccggcgtgctggaggaggaggaatag
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