Pseudozyma flocculosa: PFL1_02233
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Entry
PFL1_02233 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03030
DNA replication
pfp03410
Base excision repair
pfp03420
Nucleotide excision repair
pfp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFL1_02233
03410 Base excision repair
PFL1_02233
03420 Nucleotide excision repair
PFL1_02233
03430 Mismatch repair
PFL1_02233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfp03032
]
PFL1_02233
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_02233
DNA replication proteins [BR:
pfp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PFL1_02233
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PFL1_02233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
RuvB_N
AAA_assoc_2
AAA_16
RCF1-5-like_lid
AAA_14
AAA_18
NTPase_1
Motif
Other DBs
NCBI-GeneID:
19316354
NCBI-ProteinID:
XP_007877937
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MPPKKASQQSLPKGQASLQSFFGGGPPRTASSANSQATPSPTKSAQKSAHAHSPSSSPVT
EIKEKVTVRGSPQKSVPAPKPDPPSSSSKYFADKKPPPAATRGSNRSDPLVLDDSDDSDM
ATAKPAAKPATRTAGRAGAKRKNLAESSDNDDYDDDADDFKPEPKKPATARTVSAAARRS
NIPARKHQDTDSEDDFEEIVEKPAAKSKAKPASAAAKSRPTPSRATKKEEPSTASEIEEP
TPAKAAAKSNWREAAARRAAGPVAPGSKEIPQGQPNCLAGLTLVFTGELTSLSRDEASDL
AKRYGARITSGPSSKTSYVVLGEGAGAKKLESIQKNKIKTLDEDGFLDLIATRGAGELDE
KAKKKIAEEEKKVRETAKAMATAVKEAPEDLSNALWTTKYAPKALKDLTGNKSAVEKLQT
WLRAWPASYKSNFKKPGPAGMNIYRAVLISGPPGIGKTTSAHLVAKLEGYTPIEFNASDT
RSKKLIESMLRDTIDNKSLDGWYSGGGRMVGSSDVKITDRTVLIMDEVDGMSGGDRGGIG
AINMLIKKTKVPIICICNDRRNQKMRPFEHTTYNLSFRKPDAGAVKSRMLSIAFREKLKV
PGEVMGQLIEAAQGDIRSVINMLSTWKLGKDTMDFDEGKKLGLENAKPGMHTPFSLYSDL
SSPYMFGPTCRKTLNDKTELYFQDHSFVPLMVAENYIKARPVRARDADSHVSSYKHLQLL
RHAAESISDGDMIDRMIHGSEQHWSLMPLHAIASTVRPCSYTYGGTEGGFPSFPSWLGQN
SKQQRLSRAVVDLQARMRLSCSGSRHDVRQHYLPTMWPMLIEPLVERGSEGIEDVIQVMD
DYYLGIEDREAILELGVEPNNAETVIKGIPSAVKAGFTRKYNSTNHPIAFYKGVDTGGKA
KQLKGEAAPDLEDVVEEDDVPDDVDQEDEASDDDLSKDKMVKKPKASAAKGKGKAAAAAK
PKAKGKK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccccccaagaaggcctcacagcagagcctgccaaagggtcaggcctctctccagagc
ttcttcggcggcggcccacctcgcacagccagcagcgcaaacagccaggccaccccttcc
cccacaaagtcggctcaaaagtcagcccacgctcactccccttccagctctcccgtcacc
gagatcaaggaaaaggtcaccgtccgcggctcgccccaaaaatccgtcccagcccccaaa
cccgaccctccctcctcctcctcaaagtactttgccgacaagaaacctccgcctgccgcc
acccgcggatcaaatcgttccgaccccctcgtcctcgacgactctgacgattccgacatg
gcgactgcaaagcccgccgccaagcctgccacccgcacagccggcagagccggtgcgaag
cgaaagaatctcgcagagagcagcgacaacgacgactacgacgacgacgcagacgacttt
aagccagagccaaagaagcccgccaccgcacgcaccgtatctgcagccgccagaaggtcc
aacatccccgcccgcaagcaccaagacaccgactccgaagacgactttgaggagatcgtc
gaaaaacccgccgcaaagtcaaaggccaaaccagcatccgccgctgccaagtcgcgtccc
acgccgtcgcgcgccaccaaaaaggaagagccctcgacagcgtccgagatcgaagaaccc
acgccggccaaggcggctgccaagtccaactggagggaggcggccgctaggagagcggcg
gggcccgtcgcgcctggctcaaaggagatcccccagggacagccaaactgcctcgccggc
ctcacgctcgtctttacgggagagctcacctcgctcagcagggacgaggcctcggacctc
gccaagcggtacggcgcccgcatcacctcgggtccttcgtcaaagacctcgtatgtcgtc
ctcggcgagggcgctggcgccaaaaagctcgagtcgatccagaaaaacaagatcaagacg
ctcgacgaagacggcttcctcgacctcatcgccacccgcggcgccggcgagctcgacgaa
aaggcgaagaagaagatcgcggaagaggagaagaaggtcagggagacggccaaggccatg
gccactgccgtcaaagaggcgcccgaggacctcagcaacgcgctctggaccacaaagtac
gcgcccaaggcgctcaaggacctcaccggcaacaagagcgccgtcgaaaagctgcagacc
tggcttcgcgcctggccggcgtcgtacaagtccaacttcaagaagcccggcccggccggc
atgaacatctaccgcgccgtcctcatctcggggcctccgggcatcggcaagacaacctcg
gcccacctggtggccaaactcgagggatacacgcccatcgaattcaacgccagcgatacg
cgcagcaagaagctgatcgagtcgatgctcagggatacgatcgacaacaagtcgctcgac
gggtggtacagcggcggaggcagaatggtgggctcctccgacgtcaagatcaccgaccgc
accgtgctcatcatggacgaggtcgacggcatgtcgggcggcgaccgcggcggaatcggc
gccatcaacatgctgatcaagaagaccaaggtgcccatcatctgcatctgcaacgatcgc
cgcaaccagaagatgcggccgtttgagcacaccacctacaacctcagcttccgcaagccc
gacgccggtgccgtcaagtcgcgcatgctgtcgattgccttccgagagaagctcaaggtc
cccggcgaggtcatgggacaactgatcgaggccgcgcagggcgacatccgatcggtgatc
aacatgctctcgacctggaaactgggcaaggacacgatggactttgacgagggcaagaag
ctcggcctcgagaacgccaagccgggcatgcacacgcccttcagcctctacagcgatctg
tcgtctccctacatgtttggccccacctgccgcaagacgctcaacgacaagaccgagctc
tacttccaggaccactcgttcgtgccgctgatggtcgccgagaactacatcaaggctcgg
ccggtgagggcgagggacgccgacagtcacgtcagcagctacaagcacctgcagctcttg
cgccatgcggccgaatcgatctcggacggtgacatgatcgaccgcatgatccacggctca
gagcagcactggagcctgatgccgctgcacgctatcgcctcgacggtccgaccctgctcg
tacacctacggtggcaccgagggtggcttcccctcgttcccgtcgtggctgggacagaac
tcgaagcagcagaggctgtcgcgcgccgtggtggacctgcaggcgaggatgcggctgagc
tgctcgggcagccgtcatgatgtgaggcagcactacctgcccaccatgtggccgatgctg
atcgagcccctggtcgagcgaggcagcgaaggcatcgaagacgtcatccaggtcatggac
gactactaccttggcatcgaggaccgagaggccatcctcgagctgggtgtcgagcccaac
aacgccgagacggtcatcaagggcatcccttccgctgttaaggcaggcttcacgagaaag
tacaactcgacgaaccacccgattgccttctacaagggagtcgacacgggcggcaaggcc
aaacagctcaagggcgaggccgcgccggatctcgaggacgttgtcgaggaggacgacgtg
ccggacgatgttgaccaggaagacgaggccagcgacgacgacctcagcaaggataagatg
gtcaagaagcccaaggcatcggccgcaaagggcaagggcaaagcagcggccgcggccaag
cccaaggcaaagggcaagaagtga
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integrated database retrieval system
