KEGG   Pseudozyma flocculosa: PFL1_02407
Entry
PFL1_02407        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PFL1_02407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfp03009]
    PFL1_02407
Ribosome biogenesis [BR:pfp03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PFL1_02407
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Utp12 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ASA1 Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_Aladin WD40_MABP1-WDR62_1st NBCH_WD40 CFAP251_N Beta-prop_RIG_1st WD40_RFWD3 PAC11 WDR54 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_ACSF4 Beta-prop_HPS5 PROPPIN Beta-prop_NUP159_NUP214 Cytochrom_D1 Utp21 Utp13
Other DBs
NCBI-GeneID: 19316527
NCBI-ProteinID: XP_007878110
LinkDB
Position
Unknown
AA seq 1066 aa
MVRSYLRHAPTQAFGLIASPTSNSILDSNAKVAFVPALEDVLVWDVKKGLLLSTWHEVGH
RSKVTALARSPFNKDTFAVGYEDGSIRIWSAQSASTTITLNGHKKAVTSLAFDSQGLRLA
SASLDTDVILWDVVAETGLFRLRGHRDAVTAVAFIHTPVAASESGPSSSANATAAASSSS
SSAPGYLLSSSKDGLVKLWDLSLQHCVETVVPGRGEIWSLAVSQEVPLLSSGSKPTRDGE
SADDVHDGAALVLTGSSEGEMRVWEISAEALINGISGLSKPDDDAALAGSAATTATTSKF
LIPRGSVPLLSNHRVSQIQFCGNTALAGQGYIAVSSTDKAVQIFRLRTSDEVAKKMARRR
KRMKEKAEKKAKGKQGDAAAGAGAGAEDDEGSIEVTWADRIEAYTNVRPTAGKLRSFSTV
VPESTSSNKIGLSLLCALSTNAIEVHNIPPPPKSKAEKAEPIEPVLASALDLPGHRADVR
AIALSSDDSLLATACGAGQLKIWNVQTGRCVRTLPCSYALSVAWLPGDQHVLVGCKDGTL
RSFDVRAGIAIETIQAHEGPLWSIAMRPDGLGCVSASADKDVKFWDFEMRAEESSDDESD
DDDDDHDDDTEPKQKPAKGPPQLALVHVRTLKMTDDVLCARFSPNGKLLALSLLDNTVKV
FYSDSLKFFLSLYGHKLPVLSLDISQDSKLCVTVSADKNVKIWGLDFGDCHKSIFAHDES
IMGVCFEHGQQGGGLFGGRQGDSHHFWTVGKDGMLKHWDGDRFELIQQLEGHHGEVWAVT
PGHRGQMVVTAGADRSIRTWEKTDEPLFLEEERERELERAYDSAAAATSRDEGRAIGSLA
DGADPDSAVPSGPESTAVSKSTAETMVAGERLIEALDIADADIAARELAIKNNVPPPPFH
ALVVSAFESDGKRTVDEEVSAQKYVLKTVEKILPAQLEDALLVLPFDKVLSLLRFLDHWA
RKEWNTTLVSRILFFLLRTHHAQIVSNRVMRPTLVSLRGHLRNALARQKTTIGFNLAALK
YVRAQHIAAKTTEMYEKSGLDMDEDAVRARIEAMSKGRGKRKLQVG
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggtccgctcctacctccgccacgcacccacccaggcctttggcctcatcgcatcccct
acctccaactcaatcctcgactccaacgcaaaggtcgcattcgtacccgcactcgaagac
gtactcgtgtgggacgtcaaaaagggcctcctcctctcgacctggcacgaggtcggtcac
cgctcaaaagtcaccgcactcgcacgcagccccttcaacaaagacacctttgccgtcggc
tacgaggacggcagcatccgcatctggtccgcacagtccgcctccaccaccatcacgctc
aacggccacaaaaaggcagtcacctccctcgccttcgacagccagggcctccgcctcgcc
agcgcaagcctcgataccgatgtcatcttgtgggacgtcgtcgcagagaccggcctcttc
cgtctccgcggccacagggacgcagtcaccgccgtcgccttcatccacacgccagtggct
gcttccgaatcaggcccttcgtcctctgccaatgctaccgccgccgcctcttccagcagc
tcctccgcccccggctatctgctcagctcgtccaaggatggcctcgtcaagctctgggac
ctctcgcttcagcactgcgtagagactgtggtgcccggacgaggcgagatctggagcctc
gcagtgtcgcaggaggtgccgctcctctccagcggctcgaaaccgacaagggacggcgag
agcgcagacgacgtgcacgacggcgcagcactcgttctcaccggcagctccgagggtgaa
atgcgggtgtgggagatctcggcagaggccctcatcaacggcatcagcgggctcagcaag
cctgacgacgacgccgcactggccggctctgcagcgacgacggcgacgacgtccaagttc
ctcatcccgcggggctcggtgccgcttttgagcaaccaccgcgtctcgcagatccagttc
tgcggcaacacggccctcgcaggccagggctacatcgccgtgtcgagcaccgacaaggcg
gtccagatcttccgcctccgaacatcggacgaagtggccaagaagatggcacgtaggcgc
aagaggatgaaggagaaggccgaaaagaaggccaagggaaagcagggcgatgccgccgcc
ggtgctggtgccggtgccgaggacgacgaggggtccatcgaagtcacctgggccgatcgc
atcgaggcgtacaccaacgtccggccgacggcgggcaagctgcgcagcttcagcaccgtc
gttccggagtcgacgagctccaacaagatcggactcagcctgctttgcgctctctcgacc
aacgccatcgaggtccacaacatcccgccgccgcccaagagcaaggcggaaaaggccgag
cccatcgagcccgtgctggcatctgcccttgacctgcccggccaccgcgccgacgtgcgt
gccatcgctctctcgtcggatgactcgctgctggccaccgcgtgcggtgcgggtcagctc
aagatctggaacgtccagaccgggcggtgcgtccggacgctgccctgctcgtacgcgctc
agcgtcgcctggctcccgggggaccagcacgtcctcgtcggctgcaaggacggcacgctc
cgcagcttcgacgtccgcgccggcatcgccatcgagacgatccaggcgcacgagggcccg
ctgtggagcatcgccatgcggcccgacggcctcgggtgcgtcagcgccagcgccgacaag
gacgtcaagttctgggactttgagatgcgggccgaggagagcagcgacgacgagtccgac
gacgacgacgacgaccacgacgacgacacggaaccaaagcagaagccggccaagggcccg
ccgcagctggcgctggtgcacgtccgcacgctcaagatgaccgacgacgtcctgtgcgcg
cgtttctcgcccaacggcaagctgctggcgctctcgctcctcgacaacacggtcaaggtg
ttttactcggactcgctcaagttcttcctctcgctctacggccacaagctgccggtgctg
tcgctcgacatttcgcaggacagcaagctgtgcgtcaccgtgtcggccgacaagaatgtc
aagatctggggcctcgactttggcgactgccacaagtcgatctttgcccacgacgagagc
atcatgggcgtctgcttcgagcacggccagcagggcggcgggctgtttggcggcaggcag
ggcgactcgcaccacttctggaccgtcggcaaggacggcatgctcaagcactgggacggc
gaccgcttcgagctcatccagcagctcgagggccaccacggcgaggtgtgggcggtcacg
cccggacatcggggccagatggtcgtgacggcgggtgcggaccggtcgatccggacgtgg
gaaaagaccgacgagcccctgttcctcgaggaggagcgcgagcgcgagctggagcgggcc
tacgactctgcggcggcggccacctcgcgcgacgagggtcgcgccatcggctcgctggcc
gacggtgccgaccccgactcggcagtgccgagcggtccggagtcgacggccgtgtccaag
tcgacggccgagacgatggtggcgggcgagcggctgatcgaggcgctcgacatcgccgac
gctgacattgcggcgcgcgagctggccatcaagaacaatgtgcccccgccgcccttccac
gccctcgtcgtgtcggcgttcgagtcggacggcaagcgcaccgtcgacgaggaggtgagc
gcgcaaaagtacgtgctcaagacggtcgaaaagatcctgcccgcgcagctcgaagacgcg
ctactggtgctgccgtttgacaaggtgctcagcctgctgcgcttcctcgaccattgggca
agaaaggagtggaacacgacgctcgtctcgcgcatcctcttcttcctgctgcgcactcac
cacgcccagatcgtatctaacagggtcatgcggccgacgctcgtctcgctgcgcggacac
ctgcgcaacgccctcgcccgccagaagacgacgatcgggttcaacctggcggcgctcaag
tacgtccgggcgcagcacattgccgccaagacgacggagatgtacgaaaagtcgggtctg
gacatggacgaggatgcggtgcgggcgcgcatcgaggccatgtccaagggcaggggcaag
aggaagctccaggtcggctga

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