Pseudozyma flocculosa: PFL1_02488
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Entry
PFL1_02488 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03020
RNA polymerase
pfp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PFL1_02488
09124 Replication and repair
03420 Nucleotide excision repair
PFL1_02488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfp03021
]
PFL1_02488
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_02488
Transcription machinery [BR:
pfp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PFL1_02488
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PFL1_02488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
19316608
NCBI-ProteinID:
XP_007878196
UniProt:
A0A061HCQ2
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MNGTNGTSRYDPLAQAQQRPKITIREINRDHADFILENVDLSFANSLRRIMIADIPTVAI
DMVEIRNNTTVLPDEFLAHRLGMIPLLSMDAAKALVDHGDCACEDGCDRCSIELRIKISC
TTRGNLEVTTNDLVRSDTIQDAVTFDDDAMQEPPAPKHPDFGKPVGHDGSIPPIIIVKMT
RGQELDVRCIARKGFAKEHAKWSPCSAVGFEYDPHNSLRHTTYWYEIDAKSEWPEGPNAR
EEEPPQDGAPFDYHKKASKFYFDVESSGSMHPAEIVETGLNLLEYRTAQIVQELGLMEEP
AVGNGAPDMGGMGSMGMGMGMGVGVGMDGMMNGHMNGHAGGGGDMDGWN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaccaatggcacgtcgcggtacgacccgctcgcacaggcgcagcagagaccc
aagatcaccatccgagagatcaacagggaccatgccgactttatccttgagaacgtcgac
ctgagctttgccaactcgctgcgcagaatcatgatcgcagatatcccgacagtcgccatc
gacatggtcgagatccgcaacaacaccaccgtcctccccgacgagttcctcgcgcatcgg
ctcggaatgatcccattgctgagcatggatgcggccaaggcgctggtggaccacggtgac
tgcgcgtgcgaggacggatgcgaccgctgctcgatagagcttcggatcaagatctcatgc
acgacaagaggaaacctcgaggtcacgacaaacgacctggtccggagcgacaccatccag
gacgccgtcacgttcgacgacgatgcgatgcaagaaccgccggcaccaaagcaccccgac
tttggcaagcccgtggggcacgacggcagcatcccgccaatcatcattgtcaagatgacc
cgggggcaggagctcgacgtgcggtgtatcgcgagaaagggctttgccaaggagcacgcc
aagtggtcgccgtgctctgcagtggggttcgagtacgacccgcacaactcgctgcggcac
acgacctactggtacgagatcgatgccaagtccgagtggccagaggggcccaacgcgcgc
gaggaggagccgccgcaggacggcgcgccgttcgactaccacaaaaaggcgagcaagttt
tactttgacgtcgagtcgagcgggtcgatgcaccccgccgagattgtcgagacgggcctc
aacctgctcgagtaccgcaccgcccagattgtccaggagctcggcctgatggaggagccg
gccgtgggcaacggcgcgccggacatgggaggcatgggcagcatggggatgggcatgggc
atgggcgtcggcgtgggcatggacggcatgatgaacggccacatgaacggccacgccggt
ggcggcggcgacatggacgggtggaactga
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integrated database retrieval system