KEGG   Pseudozyma flocculosa: PFL1_02488
Entry
PFL1_02488        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03020  RNA polymerase
pfp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFL1_02488
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFL1_02488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_02488
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_02488
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PFL1_02488
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFL1_02488
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 19316608
NCBI-ProteinID: XP_007878196
UniProt: A0A061HCQ2
LinkDB
Position
Unknown
AA seq 349 aa
MNGTNGTSRYDPLAQAQQRPKITIREINRDHADFILENVDLSFANSLRRIMIADIPTVAI
DMVEIRNNTTVLPDEFLAHRLGMIPLLSMDAAKALVDHGDCACEDGCDRCSIELRIKISC
TTRGNLEVTTNDLVRSDTIQDAVTFDDDAMQEPPAPKHPDFGKPVGHDGSIPPIIIVKMT
RGQELDVRCIARKGFAKEHAKWSPCSAVGFEYDPHNSLRHTTYWYEIDAKSEWPEGPNAR
EEEPPQDGAPFDYHKKASKFYFDVESSGSMHPAEIVETGLNLLEYRTAQIVQELGLMEEP
AVGNGAPDMGGMGSMGMGMGMGVGVGMDGMMNGHMNGHAGGGGDMDGWN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgaacggcaccaatggcacgtcgcggtacgacccgctcgcacaggcgcagcagagaccc
aagatcaccatccgagagatcaacagggaccatgccgactttatccttgagaacgtcgac
ctgagctttgccaactcgctgcgcagaatcatgatcgcagatatcccgacagtcgccatc
gacatggtcgagatccgcaacaacaccaccgtcctccccgacgagttcctcgcgcatcgg
ctcggaatgatcccattgctgagcatggatgcggccaaggcgctggtggaccacggtgac
tgcgcgtgcgaggacggatgcgaccgctgctcgatagagcttcggatcaagatctcatgc
acgacaagaggaaacctcgaggtcacgacaaacgacctggtccggagcgacaccatccag
gacgccgtcacgttcgacgacgatgcgatgcaagaaccgccggcaccaaagcaccccgac
tttggcaagcccgtggggcacgacggcagcatcccgccaatcatcattgtcaagatgacc
cgggggcaggagctcgacgtgcggtgtatcgcgagaaagggctttgccaaggagcacgcc
aagtggtcgccgtgctctgcagtggggttcgagtacgacccgcacaactcgctgcggcac
acgacctactggtacgagatcgatgccaagtccgagtggccagaggggcccaacgcgcgc
gaggaggagccgccgcaggacggcgcgccgttcgactaccacaaaaaggcgagcaagttt
tactttgacgtcgagtcgagcgggtcgatgcaccccgccgagattgtcgagacgggcctc
aacctgctcgagtaccgcaccgcccagattgtccaggagctcggcctgatggaggagccg
gccgtgggcaacggcgcgccggacatgggaggcatgggcagcatggggatgggcatgggc
atgggcgtcggcgtgggcatggacggcatgatgaacggccacatgaacggccacgccggt
ggcggcggcgacatggacgggtggaactga

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