Pseudozyma flocculosa: PFL1_02491
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Entry
PFL1_02491 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03013
Nucleocytoplasmic transport
pfp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFL1_02491
03015 mRNA surveillance pathway
PFL1_02491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_02491
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PFL1_02491
mRNA cycle factors
P-body specific factors
PFL1_02491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
19316611
NCBI-ProteinID:
XP_007878199
UniProt:
A0A061HB42
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MSARSQPTAANPSAANPSSSTANSNQSSAAATPSIAASNIPTAPAKDDAAAAQHASQQLF
RDRQRRRQQLRAANLAAWSAGPSIPSSSLDSNLKKNTAFIKRVKQSLAQDARDQLIRDLG
TLSLDKYREEIVQAVPEGLQKCINPKDCMAAAEILSAFHCRFGGDAFSAPLTSILSATLA
PPNKLALQSIPQEQRERDEAARVARQKQLLRVAADLALVEVVGHSKDQSSAVWLYQVTKE
LLATDKDHVNVPILITLLRALAPALVDPPSTADAGTSADPEGIAKGVSAISLQDAAGAAG
AVAELDAADPEAAPLVTTEMKAKFRKLFETYFATLSRKIVKEHERLQEQDRRNHEAYIRY
GEIFEDRQQTYEKMTKGFERYHEWGKLLSDLLGVPMPKLVDAAKSNAIGLGVNLDSKSAL
FNERSDEDFGSNQSPWEDEDTRRFYEDLLDLSDVIPPSVLAGTSSSTASASKDTDGDASA
RDGQDPASPDPSRSPRPVSDGEDASEGAVGTTSGADAASEDQMNAGPAAQLNSLLAKLPD
LTNRAMIDSAAVDFAFLASKPARRKLVKHLSSIPRSRLDLIPYYARLAATLNRYMPDVGS
GLVGTLDDEFRYFQRKKNVELTESRAKNARFLAELTKFKVTPSHTIFHCLKVCLEDFSGP
NIDVLATLLETCGRYLLRTEESSAKMRSMLEMLRRKRGLVNLDARQLLMLDNAYYQCNPP
ERKAIEQKVRSPMELFVRHLVYDVLTKKTLDKVLKLLRKLHWEDPTTVDTLKALFTRVWK
MKFSNIHLLAILVYDLQAYHLAFTVDVIDQVLENIRTGLEQNIFKHNQRRVATVRYLGEL
YNYRLINSGIVFDQLWSLTTFGHPGGRPLPGQVTPIDAPDDYFRIRLICTLLDTCGMCFD
RGSLKKKLDEFLVFLNLYVLSKERPLPMEVDFMLSDTLESLRPKFQLKTDFAEAALEVDL
MLAAHRASNPASGSGAEGAGDGDYDDEFDEDEDEDDDSDDDDDDDDGRSGDESRRGPKMR
NGGDSTGVSQLGDDDFDDDDEDDDDAINDFSEGGSHLGRDTDAEEDEAMVRRREEEATIK
READDEFDRELAKMMSESGSSVGIKTQNRGLSDVGIPMIRSRRASQSSAYASKSDRSDRE
LGTGTSGDDDDDDDDDDEGQHMRFSLLSKKGNKQTTHEVKVPATSAIAINTRTKQLKNEA
ERRQLKELVLAYEGREEEADRRSLEQTLSRRGFKVKFADEQRG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacgctcccagccgacagccgcgaacccctcggcagccaacccttcctcgtcc
accgccaactccaaccagagctcagcagcagccactcccagcatcgcggcatcaaacatc
cctacagcacctgccaaagatgacgcagcagcagcacagcatgcatcccaacagctcttc
cgcgataggcagaggcgcaggcagcagctcagagccgcaaacctagccgcctggtccgcg
ggcccctcgataccttcctcgtcgctcgactccaacctcaaaaagaacaccgcattcatc
aagcgcgtaaagcagagcctcgcccaggatgccagggaccagctcatccgcgacctcggt
accctcagcctcgacaagtaccgcgaggaaatcgtacaggccgtgccagagggtctccag
aagtgcatcaatccaaaggactgcatggccgcagcagagattctctcggccttccactgc
cgcttcggcggagacgccttctccgcacccctcaccagcatcctctcggcgacgctcgcc
ccgcccaacaagctcgcactccaatcaataccccaggagcagagggagcgcgacgaggcc
gcaagggtggcgcgccagaagcagctcctccgcgtcgctgcagaccttgccctcgtcgaa
gtggtcggccactccaaggaccagagcagcgccgtctggctctatcaggtcacaaaggag
ctgctcgccaccgacaaggaccacgtcaatgtccccatcctcatcacgctgctccgcgcc
ctcgcaccggcgctcgtcgaccctcctagcaccgccgatgccggcacatctgcagacccg
gagggtatcgccaagggtgtgagcgccatctcgctccaggacgcggcgggagctgcgggt
gctgtggccgagctcgatgccgccgatccagaggcagctccactcgtgacgaccgagatg
aaggccaagtttcgcaagctcttcgagacctactttgccacgctgtcgcgcaagattgtc
aaggagcacgagcggctgcaagagcaggatcgccgcaatcacgaggcatacatccgctac
ggcgagatcttcgaggaccgccagcagacctacgagaagatgaccaagggctttgagcgc
tatcacgagtggggcaagctcctctccgacctcctcggcgtgcctatgcccaagctcgtc
gacgccgccaaatccaatgccatcggcctcggcgtcaacctcgactccaagtcggccctc
ttcaacgagcgcagcgacgaggactttggctcgaatcagagcccttgggaagatgaagat
acgcggcgtttctacgaggacctgctcgacctcagcgacgtcatcccgccgagcgtactg
gccggaacgtcttcttcgacggcgtcggcgtccaaggacacggacggcgatgcttccgcg
cgggacggccaggatcccgcatcgcctgacccgagcagatcgccgcgcccggtttcggac
ggggaggatgcatcagaaggagccgtgggcacaacgtcgggcgccgatgcggcgtcagag
gaccagatgaacgccggcccggcagcccagctcaactctctgctggccaagctgccggac
ctcaccaaccgcgccatgatcgacagcgctgccgtcgactttgcctttctggcgagcaag
ccggcgaggcggaagctggtaaagcacctctcgtcgatcccacgcagccggctcgatctg
ataccctactacgccaggctggcggccacgttgaaccgttacatgcccgacgtaggctcc
gggctggtcggcacgctcgacgacgagtttcgctacttccagcgcaagaagaacgtcgag
ctgaccgagtcgcgcgccaagaacgcccgcttcctcgccgagctgaccaagttcaaggtg
acgccctcgcacaccatcttccactgcctcaaggtgtgcctcgaagacttttccgggccc
aacatcgacgtgctggccacgctcctcgagacgtgcggccgctatctgctgcgcaccgag
gagagcagcgccaagatgcgcagcatgctcgagatgctgcgccgcaagcgcggcctcgtc
aacctcgacgcgcggcagctgctgatgctcgacaacgcctactaccagtgcaacccgccg
gagcgcaaggccatcgagcagaaggtgcgcagcccgatggagctcttcgtccgccacctc
gtctacgacgtgctgaccaagaagacgctcgacaaggtgctcaagctgctgcgcaagctg
cactgggaggacccgacgacggtcgacacgctcaaggcgctcttcacgcgcgtgtggaag
atgaagttcagcaacatccacctgctggcgatcctcgtctacgacctgcaggcctaccac
ctcgcctttaccgtcgacgtcatcgaccaggtgctcgaaaacatccgcacgggcctcgag
cagaacatcttcaagcacaaccagcggcgagtggccaccgtgcgctacctgggcgagctg
tacaactaccggctgatcaacagcggcatcgtctttgaccagctgtggagcctgacgacg
tttggccacccgggcggccggccgctccccggccaggtgacgccgatcgacgcgcccgac
gactatttccgcatccgcctgatctgcacgctgctcgacacgtgcggcatgtgctttgac
cgcggctcgctcaagaagaagctcgacgagttcctcgtctttctcaacctctacgtgctg
tccaaggagcggccgctgccgatggaggtcgactttatgctgtcggacacgctcgagagc
ctgcggcccaagttccagctcaaaaccgactttgctgaggccgcgctcgaggtcgatttg
atgctcgccgcccaccgtgccagtaatcccgcctccggcagcggcgcagagggtgcgggc
gatggcgattacgacgacgagttcgacgaggatgaggacgaagacgatgacagtgatgac
gacgacgacgatgacgacggccgcagcggcgacgagagccggcgcgggcccaagatgcgc
aacggcggcgacagcacgggcgtcagccagctgggcgacgacgactttgacgacgacgac
gaggatgacgacgacgcgatcaacgacttttccgagggcggctcgcatctgggccgcgac
acggacgccgaggaggatgaggccatggtgcggcggcgcgaggaggaggcgacgatcaag
cgcgaggcggacgacgaattcgatcgcgagctggcaaagatgatgtccgagagcggctcg
agcgtggggatcaagacgcagaaccgcggcctgtcggacgtgggcatcccgatgatccgg
agccggcgggcgtcgcagtcgagcgcgtacgcgtccaagtcggaccgctccgaccgcgag
ctgggcacgggcaccagcggcgacgacgacgacgacgacgacgacgacgacgaggggcag
cacatgcgcttctcgctgctgagcaagaagggcaacaagcagacgacgcacgaggtcaag
gtgcccgccacatcggcgattgccatcaacacgcggaccaagcagctcaagaacgaggcc
gagaggaggcagctcaaggagctcgtcctcgcctacgaggggcgagaggaggaggcggat
cgcaggtccctcgagcagacgctgtcgcggcgcggcttcaaggtcaagtttgccgatgag
cagcgaggctga
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integrated database retrieval system
