KEGG   Pseudozyma flocculosa: PFL1_02678
Entry
PFL1_02678        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K15361  WD repeat-containing protein 48
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    PFL1_02678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_02678
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     PFL1_02678
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz DUF3337 WD40 WD40_WDHD1_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_SPT8 WDR90_beta-prop_4th WD40_like
Other DBs
NCBI-GeneID: 19316795
NCBI-ProteinID: XP_007878383
UniProt: A0A061HDB8
LinkDB
Position
Unknown
AA seq 1335 aa
MPTAKRVSYVLPNQQPPRYFGLPPLGADRGFSTGPLLVPSQRSSHPPPPTSHPAALHPQH
TLAVSSLAIDTTTCIHSSGSEDDELAPEGILYTGGRDGLVGSWELGLPMRKASTHGFAHD
TPRNSSSDDHGDDSDVQATEALLASSRTDTDAAAQWHVDPLRANEACPTQFRQCVQSHTD
WINDVLLCNRNQTLVSASSDRTVKIWNPHDPHTSLSPHVLGTHKDYVKALAHASESDYVV
SGGFDRAIRLWDIRETRTAPIFEFADRTSIYALGVNPNGSVIASGSPEQHVKVWDPRSGQ
KCAELVGHTDSIRSVLVSQDGRHLLSGSSDSTVRLWSLGEQRCLHTFTHHSDSVWSLFSA
HPDLDVFYSGDRQGYVCKVDWERCAEVSEGECVVLCRERDSDLSASTSSLDGDGDGDDSG
GEAAYAYHRRDAKVGIQKIVALDDTYFWTATGSSDVHRWRDVPRRTEREALYPIGGLRSS
RSFEHFGRRSTSSFHPFRSSLAGGQELAHAELVAPDLSRQTSVSFMEPHTPPPGQPRAGR
FAARNDSVASLNGPAIALSAAMDLPPGGGSDLAATMHGIPFDSLVSLAPISDPYGDQIGL
GSISMRDPRSYDDDRASSVIGLRSAMSHLSIDQARPGLSPPTTPSAAAMATAAHAQIANV
QAMDGRQRPASTRSASLRFAPMQQTINGAAHSYRTGSDAGSDGLAGDDDEGEADVDGDDD
DDDDEPAYQARLSFEDRELAEEAQPLRTKADDIIRGSHGLIRSSMLNDRRHVLAISSTGA
VTLWDVVKGVCLGEFDPSDVREAAMQSSQIPASLLRRWRPQLTPGDTLEAVKERIEGQGV
TPLWCSVDTKSGALTVHLEEPRCFEAEFYIDEFADCVDLDDFKEDQRGQVAKWILRNLFA
GFVWAEEQRRGRQQVHGGGAVSTPGLDRILQASRRGPATPGMTIALATPAKTPAFTPGGT
GPLSSAAAQRTPHALPPSHSGGAAKAVNGVSPGPAGDYFSIKSAAARQPDSSAKAAATVA
TPSEGGSSFADAGPQTPGGSGLMSKLRFGKNRAEKVGTPTEATSDAAATPAANEELSAEM
KEQQTHAVLLQQLLARPIAPLSMREVPELPFSPETALIISESSADAGSWEVVYRGLVSSA
ADDVDVLEERSPLWLLELLLGNRVLARDPVKLSFTLQPWISSGAKRDGFGGFGDGSLPMP
DMPSGNARLTATRCLRIKKTCAYVCEKLDLASPQSRANSIAASRRSSADAGLKKGPGGGL
ASPSSHLSMTSLAAQQQAQQQQQQAGEAAPAAAAGKQQGRRRRQRTRTATLKTWERCRRT
RSSRSCATTRCCRTT
NT seq 4008 nt   +upstreamnt  +downstreamnt
atgccaaccgcaaaaagagtctcgtacgtgctgcccaaccagcagcccccgcgctacttt
ggcctgccgcccctcggcgcagatagaggcttctccaccggcccactcctcgtcccatcc
cagagatcgtcccatccgcccccgcccacatcgcacccggccgccctccatccccagcac
accctcgccgtatcctcgctcgccatcgacaccaccacgtgcatccattcatccggctcg
gaagacgatgagctcgcacccgaaggcatcctctacaccggcggcagggacggcctcgtg
ggctcatgggagctcggcctgccaatgcgaaaggcctccacacacgggtttgcgcacgac
accccacgcaactccagcagcgacgaccacggcgacgactccgacgtccaggcgacagag
gcgctgctcgccagcagccgcaccgacaccgacgccgccgcccagtggcacgtagacccg
ctgcgggccaacgaggcgtgccccacccagttccgccagtgcgtccagtcgcacaccgac
tggatcaacgacgtcctcctctgcaaccgcaaccagaccctcgtctcggcctcgtcggac
cgcaccgtcaagatctggaacccgcacgacccgcacacgagcctcagcccgcacgtcctc
ggcacccacaaggactacgtcaaggccctcgcccacgccagcgagtccgactacgtcgtc
agcggcggcttcgaccgcgccatcaggctgtgggacattcgcgagaccaggaccgccccc
atctttgagttcgccgacaggacgtcgatctacgcactcggcgtaaaccccaacggcagc
gtcattgccagtgggtcgcccgagcagcacgtcaaggtgtgggaccctcgcagcgggcag
aagtgtgccgagctcgtcggccacaccgacagcatccgcagcgtcctcgtgagccaggac
ggccgccacctcctctcgggctcgtcggacagcaccgtcaggctctggtcccttggcgag
cagcgctgcctgcacaccttcacccaccactcggacagcgtctggtcgctcttctccgcc
cacccggacctcgacgtcttctactcgggcgatcgccagggctacgtgtgcaaggtcgac
tgggagcgctgcgcagaggtctccgagggcgagtgtgtcgtcctctgtcgcgagcgcgat
tcggacctctcggcttcgacctcttccctcgacggcgacggcgacggcgacgacagcggc
ggcgaggcggcctacgcctaccaccgcagggacgccaaggtcggcatccagaagattgtg
gcgctcgacgacacctacttttggacggctactggcagctccgacgtccaccggtggcgc
gacgtgccgcgccgcacagagcgcgaggcgctctacccaatcggcgggctccgctcctcg
cgctcctttgagcactttggccgacgatcgaccagcagcttccacccctttcgcagctcg
ttggccggcggccaggagctggcccacgccgagctcgtggcgcccgacctctctcggcag
acgtcggtcagcttcatggagccccacacgcctccgcctggtcagccgagggctgggcgt
tttgcggccaggaacgactcggtagcctcgctcaacgggcccgccatcgccctgtcggcc
gccatggacctgcctcccggcggcggctcggatctggcggccacaatgcatggaatcccc
ttcgacagcctcgtcagcctggctcccatcagcgacccgtacggtgatcagattgggctg
ggcagcatcagcatgcgcgacccgcgcagctacgacgacgaccgcgccagctccgtgatc
ggcctccgttcggcaatgagccacctctccatcgaccaggcccgtcccggtctctctccg
cccacgacaccttcggcggccgcaatggcaacggcggcccacgcccagattgccaacgtc
caggccatggacgggcggcagcggcccgcaagcacgcgttccgccagcctgcgatttgcg
ccgatgcagcagaccatcaacggtgctgcgcactcgtaccggacggggtccgacgccggc
agcgatggccttgcgggcgacgacgacgaaggagaagccgatgtcgacggcgacgacgac
gacgacgacgacgagccggcctatcaggcgcgcctatcgttcgaggaccgcgagctggcc
gaggaggcgcagccgctgcggaccaaggcggacgacatcatccgaggctcccacggtctg
atccgctcgtcgatgctcaacgaccggcgccacgtgctggccatcagcagcacgggcgcc
gtcactctgtgggacgtggtcaagggcgtctgcctcggcgaattcgacccgtccgacgtg
cgcgaggccgccatgcagtcgtcgcagatcccagcgtcgctgctgcggcggtggaggccg
cagctgacgcccggcgacacgctcgaggctgtcaaggagcgcatcgaggggcaaggcgtg
acgccgctgtggtgctcggtcgacaccaagagcggcgcgctgaccgtccacctcgaggag
ccgcgctgcttcgaggccgagttctacatcgacgagttcgccgactgcgtcgacctcgac
gatttcaaggaagaccagcgcggccaggtggccaagtggatcctgcgcaacctctttgcc
ggcttcgtgtgggcagaggagcagcggcgcgggcggcagcaggtgcatggcggcggcgcg
gtctcgactcctgggctggaccggatactgcaggcgagcaggcgcggaccagcgacgccg
ggcatgaccattgcgctagccacgcccgccaaaacgccggcgttcactccggggggcaca
ggaccgctatcgtcggcagccgcccagcgcaccccacacgccctgccgccttcgcactcg
ggcggagcggccaaggccgtcaatggggtcagcccgggcccggctggcgactacttttcg
atcaagagcgccgcggcgaggcagcccgactcgagcgcaaaggcagcggcaacggtggcg
acgccgtccgaaggcggttcctcgtttgccgacgccgggccgcagacgccgggcggcagc
ggcctgatgagcaagctgcgatttggcaagaaccgggccgaaaaggttggcacgccaacc
gaggctacgagcgacgctgcggcgacaccggctgccaacgaggagctgagcgccgagatg
aaggagcagcagacgcacgccgtcctgctgcagcagctgctggcgaggccgattgcgccg
ctgtcgatgcgcgaggtgccggagctgccgttttcgcccgagacggcgctgattatctct
gagtcgtcggcggatgcggggtcgtgggaggtcgtgtaccgcgggctggtgagcagcgcg
gccgacgacgttgatgtgctcgaggagcggtcgccgctgtggctgctggagctgctgctg
ggcaaccgggtgctggcgcgggatccggtcaagctgagctttacgctgcagccgtggatc
tcgtctggggccaagcgggatgggtttggcgggtttggcgacgggtcgctgccgatgccc
gacatgccgagcggcaacgcgcggctgacggcgacgcggtgcctgcggatcaagaagacg
tgcgcctacgtgtgcgagaagctggacctggcgtcgccccagtcgcgcgccaacagcatc
gccgccagccgccggtcgtctgcggatgccgggttgaaaaagggcccgggcggggggctg
gcgtcgccctcgagccacctcagcatgacttcgctggctgcgcaacagcaggcgcagcag
cagcagcagcaggcgggggaggcagcgccggcagcggcggcggggaagcagcagggacga
cggcggcggcagcggacccggacagcgacgttgaagacgtgggagcgctgccgccgcacg
aggtcgtcgagatcgtgtgcaacgactcggtgctgccggacgacatga

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