Pseudozyma flocculosa: PFL1_02737
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Entry
PFL1_02737 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PFL1_02737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfp03019
]
PFL1_02737
Enzymes [BR:
pfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PFL1_02737
Messenger RNA biogenesis [BR:
pfp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PFL1_02737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clp1
CLP1_P
CLP1_N
AAA_16
AAA_28
Motif
Other DBs
NCBI-GeneID:
19316852
NCBI-ProteinID:
XP_007878443
UniProt:
A0A061HAA7
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MADPSSSSGAGAGPSIRRVTLPPRSEYRFELEPHERLSIRLLPNAGDAEIFGAELVGSTQ
ERWYPFGDEAKAAVSTWNGAQIDIAGSATTEYLADEPSPTYTSYSNLHLYLEKARIQARQ
ALRQDPKLLTALVSAGSDPSYIAPRATDEDPGAAGGNHGGSSAAAASNASSTSAYRPEGQ
GPRVMVLGPESAGKTSLIKFLSNYALRSPVVASLGKGEAGKVAESLRKGGDGIVYPDAID
DETEESKKKRKLEESQSEITGWWPVVVNLDPSEGASPLPCCLSALPLSPLPLASLPSPSP
AFPLGTSTPTTGAIPPGPSTAHGVAPLSLWLGKESVRENERHFRRVVDWLVEGVERRLAR
DFRSRMSGLLIDTPGVITADARSRYAFIQHCVKAFKVDTIVILGHEKLNIEMTRMFGSGA
APSRVPGTDGIPLPRVNVIKLPKSGGVVDLDDTYKQRLRALQVRNYFYGGSAAPSSKSGG
GGGGDGSTTGGTGLPQAALPGHADPLGGLPSLSPFSTTIPFDLLEVYRVGQEAMAPSSAL
PIGAQRTVTQTQLVKLDPTNSAADQSSLLNSVLALVQPPRGGGGAGQPDSIQEPDDDEIL
GAPILGFVHVADIDTVRKKITVLSPMAGRLPSKTAILGSLDWHDV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccgtcctcgtcctccggcgccggcgccggcccgtcgatacggcgcgtgacg
ctgccaccccgatccgagtaccgcttcgagctcgagccccatgagcgcctctcgatccgc
ctgctgcccaacgccggcgacgccgaaatctttggcgctgagctggtcggcagcacccag
gagcgctggtacccgttcggcgacgaggccaaggcggccgtctcgacgtggaacggcgct
cagatcgacatcgccggcagcgccaccaccgagtacctcgccgacgagccctcgcccacc
tacacgtcctactccaacctccatctctacctcgaaaaggccaggatacaggcgaggcag
gcgctccgccaggatcccaagctcctcaccgccctcgtgtcggccggctcggacccttcc
tacatcgcgcccagggccacagacgaggacccgggcgcggcgggcggcaaccacggcggc
tcgtcggccgctgccgcctccaatgcgagctcgacgagcgcctatcggccagagggccag
ggaccgcgcgtcatggttctgggccccgagtcggcaggcaagacgagcctgatcaagttc
ctctccaactacgcgctccgctcacccgtcgtcgctagcctgggcaagggagaggcgggc
aaggtggccgagtcgctgcgcaagggcggcgacggcatcgtctacccggacgccatcgac
gacgagaccgaggagagcaaaaagaagcgcaagctcgaagagagccagagcgaaatcacc
ggctggtggcccgtcgtcgtcaacctcgacccgagcgagggcgcctcgccgctaccctgc
tgcctctctgctctcccgctctcgccgctgccattggcctcgctgccgtcgccgtcgccc
gcattcccgctcggcacgagcacgccgacgacgggtgccatcccgccgggtccctcgacg
gcccacggcgtcgcgccgctctcgctgtggctcggtaaggagagcgtgcgcgaaaacgag
aggcactttcggcgcgtcgtcgactggctcgtcgagggcgtcgagaggaggctcgccagg
gactttcgcagccgcatgtccggcctgctcatcgacacgccgggcgtcatcaccgccgac
gcgcggtcgaggtacgccttcatccaacactgcgtcaaggcattcaaggtcgacacaatc
gtcattctgggccacgaaaagctcaacatcgaaatgacacgcatgtttggcagcggcgcc
gccccctcgcgcgtaccgggcaccgacggcatcccgctcccgcgggtcaatgtgatcaag
ctgcccaagtctggcggcgtcgtggacctcgacgatacgtacaagcagcggctgcgcgcg
ctccaggtgcgaaactacttttacggcggctccgcagcaccctcgagcaagtcgggcggc
ggcggtggtggtgatggcagcacgacgggcgggacggggctgccgcaggctgcgctgcct
ggccatgccgacccgctgggcggcctgccgtccctaagcccgttttcgacgacgatcccc
tttgacctcctcgaggtgtaccgcgttggacaagaggcgatggcgccctcttcggcgctg
cccatcggtgcacaacggaccgtgacgcagacgcagctcgtcaagctggacccgaccaac
tcggcagcggaccagtcgtcgctcctcaactcggtgctggcgctggtgcagccgccacgc
ggtggcggaggggcgggccagccggactcgattcaggagcccgacgacgacgagatcctg
ggcgcgcccattctcggctttgtgcatgtcgccgacatcgatacggtgcgcaagaaaatt
accgtcctcagccccatggcgggtcggctgccgagcaagacggccatccttggctcgctc
gattggcacgacgtctag
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