Pseudozyma flocculosa: PFL1_03029
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Entry
PFL1_03029 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pfp
Pseudozyma flocculosa
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfp03009
]
PFL1_03029
Enzymes [BR:
pfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFL1_03029
Ribosome biogenesis [BR:
pfp03009
]
Eukaryotic type
Pre-60S particles
Helicases
PFL1_03029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
19317141
NCBI-ProteinID:
XP_007878737
UniProt:
A0A061H9Y3
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MPTIDFLASDDELDHSASSRRRSSNRHHDDDDNDDIDITASLLPSEPIPSKTAKAKGKGK
GSAASSAARPAMIDSIDDDEHNNDAAFIASVMQAQNVKAGAEVAKKAVGGKNKGKNKTAS
GVLSGGGSFQSMGLHPSLLRSLLLRGFTTPTPIQRQAIPAILSQPPRDVVGMARTGSGKT
LAYLIPLIQRLNGRHSRSFGIKSIIFCPSRELALQILKVGKELARGWKSDPGEGQDTRGE
AIRWAMIVGGEGMDEQFALMANNPDIVIATPGRLLHLTVEMNLDLKAVEYVVFDEADRLF
EMGFAEQLEEMLLRLPPTRQTLLFSATLPKQLVEFARAGLQANPKLVRLDADSKISAELR
MAFFSVKPSEKDAALLVLLRDVIGVPYGEQADRDEEAEALAAGPDSGDEEGGKKGWKKGQ
TGDRGGYKKFAGKKRKRPSQAGNIHLLPHQTIVFAATKHHVEYLLLLCTTAGFACSHIYS
SLDQATRGIQMSRFRRGQTSLLIVTDVAARGIDLPVLEHVINYDFPPQPRTFVHRVGRTA
RAGRKGFAYTLCTNAELPYLCDLQLFLARPLVSSHTAVGDGGADAEPIDLHDRLTLGTIP
REKLDTETEYIASSLTFTSSSTAVDFPQLKQVAERAQGKYERSITKASQESYRRAKEMVK
AGDVKLQPGEVPEWALAGTPMEELAVHDVILRPTAYGLKPLAAAAALPNGMASVAAITGS
SSAADGDPAAKPAAKRRDLAKEASEAAARAALLAKVNSFRPGETIFEIGARGESTPLSQL
MKSRRRTLDDKAKKIDAAEARKRDLRGEDEQAAAEVKRRSKKRAAADGADDEQRGDALEL
EEAGEEEIEALFSRKWGSGKVDGGDDEDVEDVDDDDNEAAGSDSDVDLPAPARRIKSLPT
TKGKAKPTSFKDPSFYMSYHHPDSQQEKGYSINGGGGGSSSSTSFLQQARSAAYDVEGDD
STFGTQIQRPNAQRWDTKKKKFIQGDGVGADNKKMIRTESGLRLPASFRSGRFEEWKKEK
RIDMPKVGEMERDRSSFQPGPSRSGPGGGGGADGQQRYRHNSYTAPKKLDPLAKNYHKKL
KERSGADARDGEDGKKVGWKKRKVNDGSRARDEIRSAKDIYRQREEKNKRMEKNARPSKR
GGGGGGRGGGRGGGRGGGRGGGRGGGRGRR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgatagacttcctcgcgtccgacgacgagctcgaccacagcgcctcctctcgg
cgcagaagctccaaccgccaccacgacgacgatgacaacgatgacatcgacatcaccgcc
tccctgctcccgtccgagcccatcccaagcaagaccgccaaggccaagggcaagggcaag
ggcagcgccgcctcgtcggcagcaaggcccgccatgatcgactccatcgacgacgacgag
cacaacaacgacgccgccttcatcgcgtccgtcatgcaggcccagaacgtaaaggcgggc
gcagaagtggcaaagaaggccgtgggcggcaagaacaagggcaagaacaagacggccagc
ggcgtcctctcgggcggtggtagcttccagagcatgggtctccacccctcgctcctccgc
tccctgctcctccgcggcttcaccacgcccacccccatccagcgccaggccatccccgcc
atcctctcgcagccgccgcgcgacgtcgtcggaatggccaggaccggatccggaaagacg
ctcgcctacctcatccccctcatccagcgcctcaacggccgccactcgcgctcgtttggc
atcaagtcgatcatcttctgcccgtcgcgagagctggcgctccagatcctcaaggtcggc
aaggagctcgcgcgcggctggaaaagcgacccgggcgagggccaggacacccgcggcgag
gccatccgctgggccatgatcgtcggaggagagggcatggacgagcagttcgccctgatg
gccaacaaccccgacattgtcattgccaccccgggccgtctgctccacctcaccgtcgag
atgaacctcgacctcaaggcggtcgagtacgtcgtcttcgatgaggccgatcgcctcttt
gagatgggcttcgccgagcagctcgaggagatgctgctccgcctgccgcccacccgccag
acgctcctgttcagcgccactctgcccaagcagctcgtcgaattcgcccgcgcaggcctc
caggccaaccccaagctggtccgcctcgacgccgacagcaagatcagcgcagagctccgc
atggccttcttcagcgtcaagccctcggaaaaggatgccgccctcttggtgcttcttcgc
gacgttatcggagtgccctacggcgagcaggccgaccgcgacgaggaggccgaggcgctg
gccgccggacccgactccggcgacgaggaaggcggcaagaagggctggaagaagggtcag
accggcgaccggggcggctacaagaagtttgccggcaagaagcgcaagcgaccctcgcag
gcgggcaacatccacctgctgccgcaccagaccatcgtctttgccgccaccaagcaccac
gtcgagtacctgctgctcctctgcaccactgccggctttgcctgctcgcacatctactcg
tcgctcgaccaggccacgcgaggcatccagatgtcgcgcttccgccgcgggcagacgagc
ctgctcatcgtcaccgacgtggcggcccgtggtatcgatctgcccgtgctggagcacgtc
atcaactacgacttcccgccgcagccgcgaacctttgtccaccgtgtcggacgaaccgcg
cgagccggacgcaagggttttgcctacacgctctgcaccaacgccgagctgccgtacctc
tgcgacctgcagctcttcctggcgcggcccctggtatcgtcgcacaccgcggttggcgac
ggcggcgccgacgccgagccgatcgacctccacgaccgcctcacgctcggcaccatcccg
cgcgagaagctcgataccgagaccgagtacatcgccagcagcctgacgttcacctcgtcg
tcgaccgccgtcgacttcccgcagctcaagcaggtcgcggagcgcgctcagggcaagtac
gagcgctccatcaccaaggccagccaggagagctaccgccgcgcaaaggagatggtcaag
gccggcgacgtcaagctccagccgggcgaggtgcccgagtgggccttggccggcacgccg
atggaggagcttgccgtgcacgacgtcatcctgcgcccgacggcgtacggtctcaagccg
ctcgctgcggccgccgctcttcccaacgggatggcctcggtggcggccatcaccggatcg
agcagcgccgctgacggcgaccccgcggccaagccggctgccaagaggcgcgacctggcc
aaggaagcctcggaggccgcggctcgcgccgccctgctggccaaagtcaactcgttccga
ccgggcgagacaatctttgagattggcgcgaggggcgaaagcacgccgctgtcgcagctc
atgaagagccgacgacgcacgctcgacgacaaggccaagaagattgacgcggccgaggcg
cggaagcgcgatctgcgtggcgaagacgagcaggcggcggcggaagtcaagaggcggtcc
aagaagagggcagccgccgacggcgcagacgacgagcagcgcggcgatgcgctcgagctc
gaagaggccggcgaggaggagatcgaggcgctcttttcgcgcaagtggggctctggcaag
gtcgacggcggcgatgacgaggatgtcgaggacgtggacgacgacgacaacgaggcggcc
ggatccgactcggacgtcgacctgcccgctccggcacgacggatcaagtcgctgccgacg
accaagggcaaggccaagccgacgtcgttcaaggacccgtcgttctacatgtcctaccac
cacccggactcgcagcaggaaaaggggtacagcatcaacggcggcggcggcggctcgtcg
tcgtcgacgtcgttcctgcagcaggcgcgctcggccgcgtacgacgtcgagggcgacgat
tcgacgtttggcacccagatccagcgcccgaatgcgcagcggtgggacaccaagaagaag
aagttcatccagggcgacggcgtgggcgccgacaacaaaaagatgatccgcaccgagagc
gggctgcgccttcccgccagtttccggagcggtcggttcgaggagtggaaaaaggagaag
cggatcgacatgcccaaagtgggcgagatggagcgcgaccgctcctcgttccaaccggga
ccctctcgatccggacccgggggtggtgggggggccgatggacagcagaggtaccggcac
aattcgtatacggcgcccaagaagctcgatccgctggccaagaactaccacaagaagctc
aaggagcgatctggcgccgatgctcgcgatggcgaagatgggaagaaggtggggtggaag
aagcgcaaggtcaacgatgggtcgagggcgagggacgagatccgcagcgcaaaggacatc
tacaggcagagagaggagaagaacaagaggatggagaagaatgctcgcccgtccaagcgc
ggtgggggcggtggtggcaggggtggaggacgtggaggtggaaggggaggtggacgcggt
ggcggacgcggcggtggcaggggaaggaggtga
DBGET
integrated database retrieval system
