Pseudozyma flocculosa: PFL1_03095
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Entry
PFL1_03095 CDS
T03141
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
pfp
Pseudozyma flocculosa
Pathway
pfp03030
DNA replication
pfp03420
Nucleotide excision repair
pfp03430
Mismatch repair
pfp03440
Homologous recombination
pfp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFL1_03095
03420 Nucleotide excision repair
PFL1_03095
03430 Mismatch repair
PFL1_03095
03440 Homologous recombination
PFL1_03095
03460 Fanconi anemia pathway
PFL1_03095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfp03000
]
PFL1_03095
03032 DNA replication proteins [BR:
pfp03032
]
PFL1_03095
03400 DNA repair and recombination proteins [BR:
pfp03400
]
PFL1_03095
Transcription factors [BR:
pfp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PFL1_03095
DNA replication proteins [BR:
pfp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PFL1_03095
DNA repair and recombination proteins [BR:
pfp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PFL1_03095
MMR (mismatch excision repair)
PFL1_03095
DSBR (double strand breaks repair)
HR (homologous recombination)
PFL1_03095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Ribosomal_L37ae
IBR
Motif
Other DBs
NCBI-GeneID:
19317206
NCBI-ProteinID:
XP_007878802
UniProt:
A0A061HBD0
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MSLSDLTQGAIARMVESTDTSNGVQNPVCQILSIKKISSTSTANPNVGDRYRIILSDGVH
FAQAMLASQKRQMAENGEIDRNSVVRVLQYSSNNVQNRRILILLDLEVIGGPTPERLGAP
KALEDQARPAGAGAPVKQENGATAPATSYGGAGAGASAGSTKPAMGGRPGGSSMNAGLPI
YPIEGLSPYQNKWTIKARVTSKSDIRHWSNQRGEGKLFSVKLLDESGEIKATGFNDAVDR
FYGLLQENKVYLISKAKVSIAKKQFSNLSNEYEIMFENSTEIEECTDASDVPEVKYEFVP
IDQLENVEPNQTCDVIGVLESYGEVSEIVSKASQRPVSKRELTLVDQSGRSVRLTMWGKS
AENFPQNQGVDDKPVIAVKGVKVGDFGGRSLSMFGSSTMMVNPDIPESHGLRGWYDNDGA
TANFKPYSNVGMAGAGGAGAGGNLAERRSIAQVRDENLGMSEKPDYFNIRATIVYIKQDN
LWYTACPSDSCNKKVNQENDGLWRCEKCDKSFEEPQYRYLLSTNVADMSGQMWLSGFNDD
AEQIIGKTASELYQIREENESEYTAVLHRAANRMYMFNCRAKQDTFNDTTRVRYTISRAA
PVDFAKAGHELAEAIKAYL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttcggacctcacgcagggcgccatcgcccgcatggtcgagagcacggatacc
agcaacggagtgcagaaccccgtctgccagatcctcagcatcaagaagatctcttcgact
tccaccgccaacccaaatgtcggagaccgctaccgcatcatcctctccgacggagtccac
tttgcccaagcgatgctcgcctcgcagaagcggcaaatggccgagaatggcgagattgac
aggaactcggtggtgcgcgtgctgcagtactcaagcaacaacgtccagaaccgccgcatc
ctcatcctcctcgacctcgaggtgattggcggcccgacacccgagaggctcggcgcaccc
aaggcgctcgaagaccaggcgcggcccgcgggtgccggcgcgcccgtcaagcaggagaat
ggcgccaccgcgcccgccacgtcgtacggaggcgccggcgctggcgccagcgccggttcc
accaagccggccatgggcggccgaccgggaggctcgagcatgaacgccggcctgcccatc
tacccgatcgagggcctgtcgccctaccagaacaagtggaccatcaaggcgcgcgtcacg
tcaaagtccgacatccgacactggagcaaccagcggggcgagggcaagctgtttagcgtc
aaactgctcgacgagagcggcgaaatcaaggcgaccggcttcaacgacgccgtcgaccgc
ttctacggcctgctccaggagaacaaggtgtacctcatcagcaaggccaaggtcagcatc
gccaagaagcagttcagcaacctcagcaacgagtacgagatcatgtttgagaactcgacc
gagatcgaagagtgcaccgacgcgagcgacgtgccagaggtcaagtacgagtttgtcccc
atcgaccagctcgaaaacgtcgagcccaaccagacgtgcgacgtcatcggcgtcctcgag
agctacggcgaggtgtccgagatcgtctccaaggcgtcgcagcggccggtgtcgaagcgc
gagctgacgctggtggaccagtcgggccgcagcgtccgcctgaccatgtggggcaagtcg
gcggaaaacttcccgcagaaccagggcgtcgacgacaagcccgtcatcgccgtcaagggc
gtcaaggtgggcgactttggcgggcgcagcctgagcatgtttggcagctcgacgatgatg
gtcaacccagacattcccgagtcgcacggcctgcgcggctggtacgacaacgacggcgcc
acggccaactttaagccgtacagcaacgtgggcatggcgggcgccggcggcgcgggagcc
ggaggcaacctggccgagcggcgctccatcgcccaggtgcgcgacgagaacctgggcatg
agcgagaaacccgactacttcaacattcgcgccacgattgtctacatcaagcaggacaac
ctgtggtacacggcctgcccgtcggactcgtgcaacaagaaggtcaaccaggagaacgac
gggctgtggcggtgcgagaagtgcgacaagagcttcgaggagccccagtaccgctacctg
ctttcgaccaatgtcgccgacatgagcggccagatgtggctcagtggcttcaacgatgat
gccgagcagatcattggcaagacggccagcgagctctaccagattagggaggagaacgag
agcgagtacacggccgtccttcaccgcgcggccaaccgcatgtacatgttcaactgccgc
gccaagcaggacacattcaacgacacgacgagggtgcgatacaccatcagccgcgccgcg
cccgtcgactttgcaaaggcgggccacgagctggccgaggccatcaaggcttacctctag
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