KEGG   Pseudozyma flocculosa: PFL1_03097
Entry
PFL1_03097        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K06634  cyclin H
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03022  Basal transcription factors
pfp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PFL1_03097
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFL1_03097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfp03021]
    PFL1_03097
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_03097
Transcription machinery [BR:pfp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PFL1_03097
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PFL1_03097
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB Med3
Other DBs
NCBI-GeneID: 19317208
NCBI-ProteinID: XP_007878804
UniProt: A0A061H8U9
LinkDB
Position
Unknown
AA seq 554 aa
MSEVKLKSEPPSASHGAAGPSSATTPAQPPRIESALMRHLDIPSNPTAPPDYGPALAYAQ
TSQARNWRFTPNRLAQMRQTNNLTAKKRLEKIWNDEKSGAASSSTPSDVPFLSVSDELAL
LTYYLIQVGRIVKAFALPELIEATAMSYVKRFYLRNTCMDFHPKSIVITSIYLATKTENY
PQSLSSFARKLAGKDPKPEVVRDNEKTILDLEFLVSQSLSFEYSTHGAHRALHGLLLDAQ
TLDKPPSREAVHALAASSQKNLTNSRLTDAEFIYTPTQIALACLRASEGVGASGRDIVEQ
WLDQKESSARAAQLAAKAARDKTRSDERERFARAKMAAARKARGKAGVKVAEDELAAAPA
PAVVEYDDALLAQQPLGMGRQELHGILDEIEKLFRDRETGGCTGLGKGDADKAKVVEIDK
RQKECSSRLSLKRKADEEAVASQRRAKKAATAKPTTIKDPFDDGGQSSAGGAGGGAGGLF
GAELRKQADNGGTNGGTETGGAKGEDERQQRQQQQQQQQQQQQQQQQQAPAPVDSDDEDV
PVSKDFAVKPDAEV
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgagcgaggtcaagctcaaatcagagccaccatccgcctcccatggcgcggcaggcccg
tcttcagcgacgactcccgcccaaccccctcgcatcgaatccgccctgatgcgccacctc
gacatcccctcgaaccccacggcgcctcccgactacgggcccgcactcgcctacgcccag
acgagccaggcgcgcaactggcgcttcaccccaaacaggcttgcacagatgcgccagacc
aacaacctcactgccaagaagcgcctcgagaagatctggaatgacgaaaagtcgggagca
gcttcctcgtcaacgccctccgacgtcccgttcctctcggtatccgacgagctggccctc
ctcacctactatctgatccaagtcggtcgcatcgtcaaggcctttgccctgccagagctc
atcgaggcgacggccatgtcgtacgtcaagcgcttctacctgcgcaacacctgcatggac
tttcacccaaagagcatcgtaatcaccagcatctacctcgcgacgaagacggaaaactac
ccgcagtcgctctcgtcctttgccaggaagctggcgggcaaggatcccaagcccgaggtg
gtcagggacaacgaaaagacgatcctcgatctcgagttcctcgtctctcagagcctgagc
ttcgagtactcgacccacggcgcccaccgggcccttcacggccttttgctggatgcacag
accctggacaagccgccgtcgcgagaggccgtccatgccctcgcagcatcgagccagaag
aacctgaccaactcgcgcctcaccgacgccgagttcatctacacgcccacgcagatcgcc
ctcgcgtgcctgcgtgcgtccgagggtgtcggggcatcgggcagggacattgtcgagcag
tggctggaccagaaggagagcagcgcgcgtgccgcgcagctggcggccaaggcggccagg
gacaagacgcgatccgacgagcgggagcgcttcgcccgcgccaagatggccgcagcacgc
aaggctcggggcaaggcgggcgtcaaggtggccgaggacgagctggcggcggctccggca
cccgccgtcgtcgagtacgacgacgcgctgctggcgcagcagccgctggggatggggcgc
caggagctgcacggtatcctcgacgagattgagaagctcttccgggaccgcgagacgggg
ggctgcacggggctgggcaagggcgacgcggacaaggccaaggtcgtcgagatcgacaag
cggcagaaggagtgcagcagccggctctcgctcaagcgcaaggccgacgaggaggccgtg
gcgtcgcagaggcgggccaagaaggcggcgacggccaagccgacgacgatcaaggatccc
tttgacgacgggggtcagtcgtctgctgggggtgcaggtggcggtgcgggtggcctcttt
ggtgccgagctgcgcaagcaggccgacaacggcggcacgaatggcggcacagagacgggc
ggggcaaagggcgaggacgagcggcagcagcggcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcaggcaccggcacccgtcgacagcgacgacgaagacgtg
cccgtgtcaaaggactttgccgtcaagccggacgccgaggtctga

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